KEGG T09957: 106139248

Amyelois transitella (navel orangeworm): 106139248

Entry

106139248         CDS       T09957

Name

(RefSeq) RNA-binding protein FXR1 isoform X1

K15516

fragile X mental retardation protein

Organism

atra Amyelois transitella (navel orangeworm)

Brite

KEGG Orthology (KO) [BR:atra00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atra03019]
    106139248
Messenger RNA biogenesis [BR:atra03019]
Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     106139248
   Factors involved in mRNA localization
    Other mRNA localization factors
     106139248
   mRNA cycle factors
    Stress granule specific factors
     106139248

SSDB

Motif

Pfam:

KH_9 Tudor_FRX1 KH_1 Agenet KH-I_KHDC4-BBP

Other DBs

NCBI-GeneID:

106139248

NCBI-ProteinID:

XP_060802052

LinkDB

Position

10:complement(join(11096605..11096798,11097737..11097805,11100292..11100379,11101401..11101482,11102003..11102087,11103687..11103807,11104319..11104456,11105097..11105240,11106279..11106426,11108011..11108064,11108505..11108591,11109300..11109467,11112089..11112252,11113758..11113911,11113992..11114044,11114415..11114501))

AA seq 611 aa
MRFQVSNVFQTKMEDLSVEVYGENGAYYKAIVTDVLDNEVLVAFENDWQPESKFPFSQVF
LPPKDTGKHTEFVENQEVEVFARSNEKEACGWWTANIKMMRGEFLVIEYLEWDNCYTEIV
PKDRLRVKTTKTPIDKSTFHKFEITVPDDLKDYLHDMQSAKVENAHKEFQKAIGAALVWY
VPERAALAVISRCETSQKRAQMLQEMHFRNLAQKFLLLKKTEEAARQLESTKIHNQGGPL
EQLSRSAGQGSDERSRYSDEFSVREDLMGLAIGTHGANIQQARKVPGVTNIELEEVSCTF
KICGESLEAVRQARSLLEYAEESIKVPRALVGKVIGKSGKVIQEIVDKSGVVRVKVEGDN
EPQPSTPREEGMVPFVFVGTRENIANAKVLVEYHVAHLKEVEQLRAEKQEIDQQLRVVLG
AGALYPPPAARARRARYPPGGARHAADAGDERGENFRPRGARHQRGNRSSERRRPLENGR
AGAHSAHRPQPPRPNSGRRREDRRRQTDDESSVLDSQDVSSADRESGSDSEGPRGNGDAR
RRRRRRQGGGWKNGVAASAGGGPGAAAAGGNTGAGSTGGAGNTGSTGGAGHPASKPRRSP
ARKAELVNGAA

NT seq 1836 nt +upstreamnt +downstreamnt
atgcgctttcaagtttcaaacgtgtttcaaaccaaaatggaggatttgtcggtcgaggtg
tacggtgaaaatggtgcttattataaggccattgtcaccgacgtgctcgacaacgaggtt
ctagtagcctttgaaaatgactggcagccagagtcgaagtttcctttttcacaagtgttt
ctcccacctaaagacaccgggaagcatacagagtttgtcgaaaaccaagaggtggaggtg
tttgcgagatccaatgagaaggaagcatgtgggtggtggacagcaaacatcaagatgatg
agaggagaattcctcgtgatagaatatctggaatgggacaactgctacacagaaattgtg
ccaaaggatcgcctccgagtgaagaccactaagacgcccatagacaagtccaccttccac
aagtttgagatcaccgtgcctgatgacctcaaagattacctgcacgacatgcaaagcgcg
aaggtggagaacgcgcacaaggagttccagaaggcgatcggcgccgcgctggtgtggtac
gtgcccgagcgcgccgcgctggccgtcatctcgcgctgcgagacctcgcagaagcgcgcg
cagatgctgcaggagatgcacttcaggaatctagcccaaaagtttttattgctgaaaaag
actgaggaggcggcgcggcagttggagtccaccaaaatacacaatcagggaggccccctt
gagcagttatcgcggtcggccggccaggggagcgacgaacggagccgctactcggacgag
ttctcagtgcgcgaggacctgatggggctggcgatcggcacgcacggcgccaacatccag
caggcgcgcaaggtgccgggcgtcaccaacatcgagctggaggaggtctcgtgcacgttc
aagatctgcggcgagtcgctggaggcggtgcggcaggcgcgctcgctgctggagtacgcg
gaggagtccatcaaggtgccgcgcgcgctcgtgggcaaggtcatcggcaagagcgggaag
gtcatacaggagatcgtggacaagagcggcgtcgtgcgcgttaaagtggaaggtgacaac
gagccacagccatcgacgcctcgcgaggaaggaatggtcccgtttgtgttcgtcggcacg
agagagaacattgccaacgctaaagttttggtcgagtaccacgtggcgcatctaaaggag
gtggagcagctgcgcgcggagaagcaggagatcgaccagcagctgcgcgtggtgctgggc
gccggcgcgctctacccgccgcccgccgcgcgcgcgcgccgcgcccgctacccgcccggc
ggcgcgcggcacgcggcggacgcgggcgacgagcgcggcgagaacttccggccgcgcggc
gcgcgccaccagcgcggcaacaggtcgtcggagcggcggcggccgctggagaacgggcgc
gccggcgcgcactccgcgcaccgcccgcagccgccgcgccccaacagcggcagacggcgc
gaagacagacgccggcagacagacgacgagagctccgtgctggacagccaggacgtctcc
agcgcggacagagagtcgggcagcgactccgaggggccgcgcggcaacggggacgcgcgc
cggcggaggcgcaggaggcaaggaggcgggtggaagaacggcgtcgcggcgtccgcgggc
ggcgggccgggcgcggcggcggcgggcggcaacactggcgcgggcagcaccggcggcgcg
ggcaacactggcagcacgggcggcgcgggccaccccgccagcaagccgcggcggtcgccg
gcgcgcaaggcggagctggtgaacggcgcggcctga

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