Amyelois transitella (navel orangeworm): 106139297
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Entry
106139297 CDS
T09957
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor RRN3 isoform X1
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atra03021
]
106139297
Transcription machinery [BR:
atra03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
106139297
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Gene cluster
GFIT
Motif
Pfam:
RRN3
DUF4527
Lon_lid
Motif
Other DBs
NCBI-GeneID:
106139297
NCBI-ProteinID:
XP_013196174
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All DBs
Position
5:complement(join(2632797..2632998,2633324..2633549,2634117..2634481,2635276..2635494,2635955..2636107,2638672..2638771,2639415..2639823))
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AA seq
557 aa
AA seq
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MALTANKSVASLMQKAINRQAAITRLKFKLSEKQVENIILSYTREGNSGPYVELMKVLKE
YPLNDDNFRILFEDCLSCVVLFNRDFSQFVELVCNVEWASRKSELVELFSKFVLSLVTAH
TYHCPRVMTCLMRCFKADGENWDESPTDETVSLWSNIHTIIAQIVAIMPMTSDILMRTVI
EQFPYYKAGCYINRSYVHNLIWMSKYIPLLQEQIMAAIVTRMVEMDVNIVESNKNKCKDD
TMFEMESEEQDVVSETLDYCMLEVLKWLEDERDTAMNVMCNIFERIILPTYGTRHVQFLL
LYTISISQQCADRVLNNLWIIAAGLHGLGPGALSTRRTAASHLAGLLARCVRVPNSRLIH
YLKSMAEWCHSYITATQESTTATDNTKHHGAFYAICHAVFYLVAFKNHHLFMSKESLLFV
ESLNLPRLVTCALNPLRSCPPQVTHAFSSVTRAHQVVYCQSIIEKNSRHTLSTVKQQYDE
WFPYDPYTLPRSGKKIWPLCIEYKDFLKEGDDESQYSRMTKKMEDDDYLMMATSPKLASS
LTNGVTAGFRTSESVFM
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggctttaacagctaataaaagtgtagctagcttgatgcaaaaagctattaatcgccaa
gccgctattacccgtttaaagtttaaattatctgagaaacaagtggaaaatattattcta
agttacaccagagaaggcaacagtggtccttatgttgaattgatgaaggtgttaaaggag
tatccattgaatgatgacaattttagaattttatttgaagactgcttgtcgtgtgtagtg
ttatttaacagggactttagtcagtttgtagaattagtgtgtaatgttgagtgggctagc
cgtaagtcggagctagttgaattgttcagcaagtttgtgctgagtttggtgactgcgcac
acataccactgcccgagagttatgacatgcctcatgcggtgtttcaaagctgatggtgaa
aattgggatgagagtccaactgatgagactgtctctctgtggtccaacattcacacaatc
atagcacaaattgtagctatcatgcctatgacaagcgacattctgatgcggacagtaata
gaacaattcccctattacaaggcggggtgttacatcaacaggtcctacgttcacaatctg
atctggatgagcaaatacataccactgttgcaggaacagattatggctgcaattgttact
aggatggtagaaatggatgtcaacatagtagagtcaaacaaaaataaatgcaaagacgat
acgatgtttgaaatggagtctgaagaacaagatgtagtcagcgagaccttagattactgt
atgctggaagttttaaaatggctagaagacgagagggacacagcgatgaatgttatgtgc
aatattttcgaaaggataatattacctacatatgggacaaggcacgtccaattcctctta
ctgtacacaatatcaataagccagcaatgtgccgatcgagttctgaacaatctctggatc
atcgcagccgggctccacgggttggggcccggagccctatcgaccagaagaacggcggca
agccacctagctggtcttttagcccgctgtgtcagagtgccaaatagcagattgatacat
tacctaaaaagcatggcggaatggtgtcattcgtatataactgcaactcaggagtcgact
acggctaccgataacacaaaacaccatggggcgttttatgcgatatgccatgctgttttc
tatctggtcgcgtttaagaatcatcacctgttcatgagtaaagaaagtctcctgttcgta
gagtccctaaacctgccgaggctagtgacgtgcgccctcaaccccctgcggtcgtgtccg
ccgcaagtgacccacgccttttcctccgtgacccgcgcccaccaagttgtctattgccag
tccatcatagagaagaacagcaggcacacattgtccactgtgaaacaacaatacgatgaa
tggttcccgtacgatccttataccttgcctagatccggcaaaaaaatatggccgctgtgc
atagagtacaaagacttcttaaaagaaggcgatgacgagtcgcaatattcgagaatgacg
aaaaagatggaagatgatgactatctgatgatggctactagtccaaaattagccagctcc
ctgacaaatggcgttactgctggctttaggaccagtgaaagtgtattcatgtag
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