Amyelois transitella (navel orangeworm): 106139328
Help
Entry
106139328 CDS
T09957
Name
(RefSeq) TBC1 domain family member 12-like
KO
K20167
TBC1 domain family member 14
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atra04131
]
106139328
Membrane trafficking [BR:
atra04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
106139328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
106139328
NCBI-ProteinID:
XP_060802473
LinkDB
All DBs
Position
11:join(9745804..9746228,9782126..9782377,9787625..9787831,9790771..9791311,9792482..9792610,9793086..9793278,9794026..9794231)
Genome browser
AA seq
650 aa
AA seq
DB search
MSTPCSKGGMRLSEALDNMQLAYNPITKQLHFVSPKVEKSEESVDEVDKLSKKSSFSDEG
NYSMSTCEKSDTSDSPKSTLNWGSVSGHQRGKDGGSFSSTVSSLSECSLGSSASKEEEGS
ETNADREQAKLKKKGLSGFFSRGVFPWKSSSSKSQESTPTVTWRLFGSKSTQNLVAKASA
DVQKSLTPVSSAANTPHHHKRQGSSASEKQFEDLVASSIALIQHDRPSNLPAKCTEEALR
HKAEHARMVEAARRKVEREAAARHARMQESWRLEERLARHAKEWSQSILPDWQNMKNSKR
TLELWWSGLPPSIRGKVWQLAIENKLKITHDMYQENVTRAKQKLYEAQLRRKRLKVVNKN
QCDCEKPVEIQDKDKQKSTDDLDETKTRLSGIPRNLSESNLKSRTADSESKKCCSKSNPN
LLEYSDECSMELIQLDIARTFPHLCIFQPGGPYFDVLHELLAAYVCYRPDIGYIQGMSFI
AAVLILNMEAPQAFVCFANLLDGPVLRAAFTRDGNTMQRLWKAYTRLLRQNVPVLADALA
PELYLLEWLYTAFAKAMPLDAACRVWDVFLRDGDTFLFNTALGILNLYQDELKDMDFISA
AQFLTKLPEDLDSEALFKSISSVSMTLDGMTFEELASCCDVEDEDVAVRL
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccccgtgttcgaaaggcgggatgcgtctcagcgaagcgctagacaacatgcag
ctcgcttataatcctatcacaaagcaacttcattttgtgagtccaaaagtggaaaaatct
gaggaatctgttgatgaagttgacaaattgtcaaagaaaagtagtttcagcgatgagggt
aactactctatgtcgacatgtgagaaaagtgacactagtgattcccctaaaagtacatta
aattggggaagtgttagtgggcaccaacgaggcaaagacggagggtcgttctcaagtact
gtgtcgagtttgtctgaatgttctttggggtccagtgcctcgaaggaggaggagggttca
gagacaaatgctgaccgggagcaagctaagctgaagaagaaaggactttctggctttttc
agcagaggtgtcttcccgtggaaaagcagctcgtcaaaaagccaagagtccacgccgaca
gtcacatggcggttgttcggcagcaaatccacacagaacctggtggcgaaggctagtgcg
gacgtccagaagtccctgacgccggtgtcttcggccgccaacaccccacaccatcataaa
agacaaggaagctcggccagcgagaagcagtttgaagatctggtggccagttccattgcg
ctgatacagcatgatcggccttcaaacctgccagcgaaatgcaccgaagaggcgttacgc
cacaaggcagagcacgcacggatggtcgaggcggcgaggcggaaggtggagcgcgaggcg
gccgcgaggcacgcgcggatgcaggagtcttggaggctcgaggagcgactggcgaggcac
gcgaaggagtggtcgcagagtatactgcctgattggcaaaatatgaagaattccaaacgc
accctggagctctggtggagcgggctaccaccttccatcaggggcaaggtatggcagctg
gccatcgagaacaaactgaaaatcacccacgacatgtaccaggaaaacgtcacgagagct
aaacagaagttgtacgaggcacagttgagacgaaagaggttgaaagtagtcaacaaaaat
cagtgcgattgcgaaaaaccagtcgaaattcaagataaagataaacaaaaatcgacagac
gatttggacgaaactaagacgcgtttgagcggaataccaaggaatttgagcgagtccaat
ctcaaatctcgcacggcggattcggagtcgaaaaagtgctgttcgaaatccaaccctaat
ctgttggaatatagtgacgagtgttcgatggagctgatccagttggatatagcaaggacg
tttccacacttgtgcattttccaaccgggtgggccttattttgatgtgctacacgaattg
ttggccgcgtatgtgtgttaccggcccgatataggatatattcagggcatgtcgttcata
gccgccgtgctgatactgaacatggaagcgccgcaagcttttgtgtgcttcgccaacttg
ctggacgggcccgtgctcagggccgccttcaccagggacgggaacaccatgcagcgtctc
tggaaagcgtacacccgcctcctccgtcaaaacgtgccggttctcgcggatgcgcttgcg
ccggagttgtatttgttggaatggttgtacacggcgttcgctaaagcgatgccgctggac
gccgcctgtagagtttgggacgttttcctcagagatggcgacactttcttgttcaacact
gcgcttggcatcctcaacctataccaagacgagcttaaagacatggatttcatatcagcc
gcgcagttcctcaccaagctaccagaagacttggactctgaagctctattcaagagcatc
tcatcagtttccatgaccctggacggaatgaccttcgaagagttggcgtcgtgttgcgac
gtggaggacgaagacgtggcggtgaggttatga
DBGET
integrated database retrieval system
