Amyelois transitella (navel orangeworm): 106139372
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Entry
106139372 CDS
T09957
Name
(RefSeq) U1 small nuclear ribonucleoprotein 70 kDa isoform X1
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106139372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atra03041
]
106139372
Spliceosome [BR:
atra03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
106139372
Complex B
106139372
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
U1snRNP70_N
RRM_1
RRM_7
Dsh_C
Motif
Other DBs
NCBI-GeneID:
106139372
NCBI-ProteinID:
XP_060808216
LinkDB
All DBs
Position
28:complement(join(307884..308002,308422..308585,309440..309545,310116..310259,311541..311642,317105..317186,317681..317743,318257..318439,319745..319888))
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AA seq
368 aa
AA seq
DB search
MTQFLPPNLLALFAARDPIPYLPPAAKLPHEKKQKGYDGVGAFLNVFEHPSETPPPTRVE
TREERVERRRRERAEQTAYKLEQEIALWDPAANPRSTLDPFKTLFVARINYDTSESKLRR
EFEGYGPIKKIHMVHNTENDKPRGYAFIEYEHERDMHSAYKHADGKKIDGKRVLVDVERA
RTVKGWLPRRLGGGLGGTRRGGADVNIKHSGREDNERERERYRLEQRERDERARHDRADR
AGARRRSRSRSRRRSGSRSRRRDRERERPREEDDTSRRRRRSRSRSERRGGARRERERSD
KERKRRRDRERKEPKVKPEDIKIKQEPADDYPEFSLPAMDMQIKQEPEDDNKYNPEDANG
DDYGYERH
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaatttttaccaccaaatttattggcattatttgccgctcgggatcctatcccg
taccttccaccagcagcgaagcttccacatgagaagaaacagaaaggatacgatggcgtc
ggtgcatttctcaacgtttttgagcacccttcggagacgccgccgccgacgcgcgtggag
acccgcgaggagcgcgtggagcggcgccggcgcgagcgcgccgagcagaccgcgtacaag
ctggagcaggagatcgcgctgtgggaccccgccgccaacccgcgctccacgctcgacccc
ttcaagactctgttcgtcgctaggataaactatgacacatctgaatcaaaacttaggaga
gaatttgaaggatatggaccaattaaaaagatacacatggtccacaacacagagaacgac
aagccgcgcggctacgcgttcatcgagtacgagcacgagcgcgacatgcactccgcgtac
aaacacgccgacggcaagaagatcgacggcaagcgcgtgctcgtggacgtggagcgcgcg
cgcaccgtgaagggctggctgccgcggaggctcggcggcgggctgggcggcacgcggcgc
ggcggcgcggacgtgaacatcaagcacagcgggcgcgaggacaacgagcgcgagcgcgag
cggtaccgcctggagcagcgcgagcgcgacgagcgcgcgcgccacgaccgcgccgaccga
gcgggcgcgcgccgtcgttcgcgctcgcgctcgcggcggcgctcgggctcgcgctcgcgg
cgccgcgaccgcgagcgggagcgccccagggaggaggacgacaccagccggcggcggcgg
cgctcgcgctcgcgctcggagcggcgcggcggcgcgcggcgcgagcgcgagcgctcggac
aaggagcgcaagcggcgccgcgacagggagcgcaaggagcccaaggtcaagcccgaggac
atcaagatcaagcaggagcccgccgacgactaccccgagttctcgctgccggcgatggac
atgcagatcaagcaggagcccgaggacgacaacaagtacaaccccgaggacgccaacggc
gacgactacggctacgagcggcactag
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