Amyelois transitella (navel orangeworm): 106139545
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Entry
106139545 CDS
T09957
Name
(RefSeq) RNA-binding protein spenito
KO
K13190
RNA-binding protein 15
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atra03019
]
106139545
03041 Spliceosome [BR:
atra03041
]
106139545
Messenger RNA biogenesis [BR:
atra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
106139545
Spliceosome [BR:
atra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
106139545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPOC
RRM_1
RRM_3
RRM_Thc1
DUF1521
GYF_2
Motif
Other DBs
NCBI-GeneID:
106139545
NCBI-ProteinID:
XP_013196469
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All DBs
Position
19:complement(3495443..3497692)
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AA seq
749 aa
AA seq
DB search
MIGLPRSDRDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIGRYDDSSDERVTPERVRRRV
RSPSPRGRYVSPHRDDYVRSRELREDSSRPYYKVLCVSALHPKASDEIVKDTLYREYKKF
GDFSIKISHELDERVAYVCFRSAEDARDAKHAKPRIILYDKVAIVDPVYEPVRSEYRSRP
RSITPPDYDRPYSYTWSPVPERRRPPPDDRAYGIPPTVPHHRDFRPPMHEYPMAGPHGPP
MHHRPPMHHPPHPHYMPRPYMPRPHHPPFEKMENKKDKFPNYLHHVQPEDDPLATRTLFA
GNLEINISDEELRRIFGRFGIVEDIDIKRPPPGTGNAFAFVRYQTLDMAHRAKVELSGQY
IGKFQCKIGYGKATPTTRVWVGGLGPWTSVAQLEREFDRFGAIKKIEYAKGEAHAYILYD
SIDAAQAAVKEMRGFALGGPDRRLRIDFADVGNGGPYRPKPYAPPVGEDGRPVEGYEGYE
GTWEDGYTYGTPGYRGRGGHRGRGRGMYRGVYHGSADYRDEEWRRAPVDSEYEGRIRRSG
SREPGVDRSRSRSPRRRSPDSDSDGSPRRSGGMLASARTLPEVVRKATTIWNGALILKNS
LFPTKFHLTDGDSEIIDSLMKDEDGKNQLRITQRLRLDQPKLDDVQKRIATSSSHAIFLG
VSGSTASITNEDASIQTRPMRNLVSYLKQKEAAGVISLLNKETEATGVLYSFPPCEFSTD
LLKRTCHNLTEESLKEDHLVIVVVRGGSA
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgattggattaccgcgtagcgatagagatagagatcgtataacggtgaaaatacgtaac
atgaaaaggagttcgtcaagggacagtatgccgcggtcgaaaaggacgcgcagtagcata
ggccgctacgacgacagctctgacgaacgggttactcctgagagagtgcggcgccgggtt
cgctcgccgagtccccgcggacgctatgtgtccccgcatcgtgatgactatgtccgttcc
cgagaactgcgagaggattcctctcgtccctactataaggtgttgtgtgtcagcgcccta
catccgaaagcatccgatgaaattgtaaaagataccttgtatagggaatacaaaaagttt
ggggatttcagtattaagatttcccatgaattagatgaaagggttgcatatgtttgtttt
cgcagcgctgaggatgcaagggatgctaaacatgcaaagcctaggataatattatatgat
aaagtggcaattgtggatccagtatatgaaccagtaagatcagagtacagaagcaggcca
agaagcatcacaccacctgattatgaccgcccatactcttacacttggtctcctgtgcct
gagagacgtcgcccccctccagatgatagagcttatggaatcccaccaactgtccctcat
catagagattttcgtcctccaatgcacgagtatccaatggcaggtcctcacggccctcca
atgcatcataggccacctatgcatcatccaccccatccccattatatgccacgcccctac
atgccgagaccacatcatccaccttttgagaaaatggaaaataagaaggacaaatttcca
aattacctccatcatgttcaaccagaggatgaccctcttgctacccgaacattatttgct
ggtaatttagaaatcaacatatcagatgaagaacttcgtcgtatatttggccggtttgga
attgttgaagatattgacatcaaacgcccgccgcctggcactggcaatgcttttgccttt
gtgagatatcagactttagatatggctcacagggctaaagtggaactttcagggcaatat
attggcaaatttcaatgcaaaattggatatggtaaagcaactcctactacacgtgtatgg
gtgggtggtttaggcccttggacttcagttgcccaacttgaaagagaatttgacaggttt
ggagctatcaagaaaatagaatatgccaaaggtgaagcacatgcatacattttatatgat
tcaattgatgcagcccaagctgctgtcaaagaaatgagaggttttgctctgggtggacct
gataggcgtctacgtattgattttgcagatgtaggcaatggtgggccgtataggcctaaa
ccatatgctccaccagtaggtgaagatggaagacctgttgaaggttatgaaggatatgaa
ggaacttgggaagatggatacacttatggaactccaggttataggggaagaggtggacat
cgtggaaggggacgtggaatgtatagaggggtctatcatggatcggctgactacagggat
gaggagtggcgaagagctcctgtagacagtgaatatgagggtcgcatacgtcgttctgga
tcgcgggaaccaggtgtggataggtcgcgctcccgctccccgcgtcgcagatctcctgac
agcgactcggatgggtcaccgcgtcgatctggtggcatgctagcatctgccagaacctta
cctgaagttgtacgcaaggcgaccacaatatggaatggagcacttatcctgaaaaactca
ctattcccaaccaaattccacctcactgatggtgattccgaaattattgacagcttaatg
aaagatgaggatggtaagaatcaactgagaatcacccaaagattgcgcttggatcagcct
aaactagatgatgtacaaaaacgtattgccacatctagttcccatgcaatattcttgggt
gtgtcaggatctactgcatctattacaaatgaggatgctagtattcagactcgaccaatg
aggaatctggtgtcttatctgaagcagaaggaagccgctggtgttatatctcttctcaac
aaggagactgaagctacaggagtgctgtactcattcccaccttgtgaattttcaactgac
cttcttaagaggacttgccataatttgacagaagagagtcttaaggaggaccaccttgtt
attgttgtagttcgtggtggttctgcttaa
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