KEGG   Amyelois transitella (navel orangeworm): 106139673
Entry
106139673         CDS       T09957                                 
Name
(RefSeq) cytoplasmic FMR1-interacting protein
  KO
K05749  cytoplasmic FMR1 interacting protein
Organism
atra  Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:atra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atra03019]
    106139673
Messenger RNA biogenesis [BR:atra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     106139673
   Factors involved in mRNA localization
    Other mRNA localization factors
     106139673
SSDB
Motif
Pfam: FragX_IP CYRIA-B_Rac1-bd
Other DBs
NCBI-GeneID: 106139673
NCBI-ProteinID: XP_060808297
LinkDB
Position
28:complement(join(3363823..3363975,3364949..3365096,3366276..3366338,3367481..3367653,3368813..3368907,3369845..3369923,3371186..3371310,3372940..3373131,3374050..3374183,3374742..3374941,3376183..3376269,3377105..3377243,3377589..3377762,3378280..3378422,3378833..3378915,3379587..3379757,3381143..3381273,3382944..3383158,3384029..3384220,3384978..3385098,3385482..3385567,3386642..3386746,3387176..3387273,3387979..3388106,3388500..3388681,3389180..3389359,3390505..3390641,3391326..3391401))
AA seq 1269 aa
MSVSEKVSLSDALTNVDVLDELTLPDEQPCIEAAPCSILYQANFDTNFEDRNGFVTGIAK
YIEEATVHANLNELLEEGNAHAVMLYTWRCCSRAIPQPRSNEQPDRVHIYERTVQVLAPE
VDKLLQFMYFQRKAIERFCGEVRRLCHAEKRRDFVSEAYLLTLGKFVNMFAVLDELKNMK
SSVKNDYSTYRRAAQFLKVMSDSQSLQESQNLSMFLATQNKIRDTVKDALEKINGYEDLL
ADVVNICVHMFETKMYLTPSEKHMLVKVMGFGLFLMDSDVCNINRLDQKKKIRLDRIDRI
FKNLEVVPLFGDMQIAPFNYIKRSKHYDPSKWPMSSSPNPPSPQADLMVHLPQIREEHQN
YISELARYSNEVTTTFKEAGSDAENKAVTELCLRGLQLLSSWCSVLTELCSWKLLHPTDH
ASNARCPPDAEEYERATRYNYTSEEKFAMIEVIAMIKGLQVLMARMETVFADAARRSIYA
ELQDFVQLVLREPLRKAIKNKKDLIRSIIVSVRETCGDWARGCEPQQDPALRGKKDAEAS
FTIKVPRRNVGPSSTQLYMVRTQLEALVSDKSGGRRTLRKDLDCGTLAQIEGFHRQSFYW
PYMLHLADSLQKCCDLSQLWYREFYLEMTMGRKVNKCTVRHQHNEECNDLITMEKRIQFP
IEMSMPWILTDHILRSKEPSMMEYVLYPLDLYNDSAQYALTVFRKQFLYDEVEAEVNLCF
DQFVYKLSEQVYAHYKQLAASMLLDKRYRAECSARGAGVVTAAGRYASLLRQRHVALLGR
HVDLCALVAQRINADMHRALDAAVAKFEAGDITGVVELEGLIAVNRLCHKLLSRYLTLDE
FDAILRESDHGVLAPYGRIALHVFWELNYDFLPNYCYNAATDRFVKCRGIQFAAGVSRER
AQQSGHALLWGSKQLTLAYSTQYAQYAGFVGPQHLHALVRLLGYQGVAVVAAELLDVARG
LLHGSLAQFTRALHAAMPRHCKLPRYDYGSPGVLGYYHAQLTDIVQYPDARTELFHSFRE
LGNIILFCMLIEQALSQEEVTDLLHAAPFQNILPRPFTAEGEKPETKQKRLEAKYAALQI
VQNVDKYGTAKQSQLSREGDLLTRERLCCGLSLFSVVLRRLRACLAAPAWPAPAAAHHAP
ADDTGEFHRLWSALQFLYCIPVGDTQFTVEELFGEGLHWAGCTIIALLGQQRRFEALDYC
YHILRVQRVDGKNENVKGIPLKSMVDRIRRFQVLNSQIFGVLARHLAADDERAGVEHVRC
FPPPCAPNH
NT seq 3810 nt   +upstreamnt  +downstreamnt
atgtctgtgagtgaaaaagtgtctctttcggatgctttgaccaacgttgatgtgttggac
gagcttacattaccagacgagcagccatgcatcgaagccgcaccctgctccatcttatac
caggcgaactttgatactaatttcgaagaccgcaatggatttgtcaccggcatcgctaag
tacattgaggaggctacagttcatgccaacctgaacgagctccttgaagaaggcaacgcc
cacgccgtgatgctgtacacgtggcgttgctgcagccgcgccatccctcagcccaggtcc
aacgagcagccggaccgggtgcacatctacgagaggaccgtgcaggtcttagctccggag
gtggacaagctgctgcagtttatgtattttcaacgcaaagcgatcgagcgtttctgcggc
gaagtgcgccgcttgtgtcacgcggagaaacgtcgcgacttcgtttccgaagcgtacctg
ctgacgctcggcaagttcgtgaacatgtttgccgtgctcgacgagctaaagaacatgaag
agctctgtcaagaacgattattctacttataggagagctgctcagttcctaaaagtgatg
tcggacagtcaaagcttacaggaatcacagaacttgtcgatgttcctcgcgacgcagaac
aagatccgggacactgtcaaggacgccctggagaagatcaatggatatgaagatttgctc
gctgacgtcgtcaacatttgcgtacacatgttcgagacaaaaatgtatctgacgccgagc
gagaaacacatgctggtcaaggtaatgggtttcggtctgttcctgatggactccgatgtt
tgcaacatcaaccgtctggaccagaagaagaagattcgtctcgatcgcatcgacagaatt
ttcaagaatttggaagtggtacctttgtttggcgacatgcaaatagcacctttcaattat
atcaagaggtccaagcattacgatccaagcaaatggccaatgtcttcaagtccgaacccg
ccctcgccgcaggcggacctcatggtgcacctgccgcagatacgcgaggagcaccagaac
tacatctcggaactggcccggtacagcaatgaggtcacgactaccttcaaagaggccggt
tctgacgcggaaaataaagctgtaaccgaactgtgtctgcggggactacagttactgtct
tcttggtgttcagtgctgactgaactttgttcatggaagctgttgcatcccacagaccac
gccagcaatgctagatgtccgcctgacgctgaagagtatgagagggccacccgctacaat
tacacttcggaagagaaattcgcgatgatagaagtgatcgccatgatcaagggtcttcag
gtgctcatggcgcggatggagacggtgttcgcagacgcggccaggaggtccatatacgct
gaactccaggactttgtacagctggtgttgagggagccactcaggaaggctatcaagaac
aagaaggaccttatcagaagtataatagtgtcggtgcgcgagacgtgcggcgactgggcg
cgggggtgcgagccccagcaggaccccgcgctccgcggcaagaaggatgcggaggccagc
ttcaccatcaaagtgcccaggaggaatgtgggcccgtcgtccacgcagctgtacatggtg
cgcacgcagctggaggcgctggtgtcggacaagtccggcgggcggcgcacgctgcgcaag
gacctggactgcggcacgctggcgcagatcgagggcttccaccggcagagcttctactgg
ccgtacatgctgcacttggctgactctctccagaaatgctgtgatttgtcccagctgtgg
tacagggaattctaccttgaaatgacaatgggcaggaaagttaacaaatgcactgtccgc
catcagcacaacgaagagtgtaacgacctcattacaatggagaaacgcattcaattcccg
atcgaaatgtccatgccttggatcctgaccgatcacattttgaggagcaaggagccttcg
atgatggagtacgtcttatacccgcttgacttgtacaatgacagcgcacaatacgctttg
acggtgttcagaaagcagttcttatacgacgaagtggaggccgaggtcaacttgtgtttc
gatcagttcgtttacaagttgtccgagcaagtttacgcgcattacaagcagttggctgcc
agcatgctgctagacaagcgttaccgcgcggaatgcagcgcccggggcgcgggcgtggta
acagcggcgggacgttacgcctctttgctgcgacagcgacacgtcgctttattgggtaga
catgtggatttgtgcgctttggtggctcaacgtatcaacgcggatatgcaccgcgcattg
gacgccgcggtcgccaaattcgaagcgggcgacattactggtgtagtggaacttgagggt
cttatagccgtcaaccggctgtgtcacaaactgctcagccgttacctgaccctggacgag
ttcgacgccatcttgcgggagtcagaccacggcgtgctcgccccctacggcaggatagcg
ttacacgtattctgggagctgaattacgacttcctacccaattactgctacaacgccgct
actgacagatttgtaaagtgtcgcggcatccagttcgcggcgggggtttcccgcgagcga
gcgcaacagtcgggacacgctttgctgtggggctccaagcagctgacgctcgcttacagc
acgcagtacgcccagtacgctgggttcgtgggcccgcagcacctgcacgcgctggtgcgg
ctgctgggctaccagggcgtggcggtggtggcggccgagctgctggacgtggcgcgcggc
ctgctgcacggctcgctggcgcagttcacgcgcgcgctgcacgccgccatgccccgccac
tgcaagctgcccagatacgattatggttcgccaggcgtcctcgggtactaccacgcgcaa
ctgaccgacatagtgcagtatcccgacgccagaactgagctgttccactcgttccgggaa
ttggggaacattatactgttctgtatgctgatcgagcaggcattaagtcaggaggaggtg
actgacttgctacacgccgctccattccagaacattctgccccggccgttcactgctgag
ggcgaaaaaccggaaacaaagcagaaacgcctcgaggccaaatacgcggcgcttcaaata
gtccaaaacgtggacaagtatggcactgccaaacaaagccagctgtcgcgcgagggcgac
ctgctgacccgcgagcggctgtgctgcgggctgtcgctgttctcggtggtgctgcggcgg
ctgcgcgcgtgcctcgccgcgcccgcctggcccgcgcccgccgccgcgcaccacgcgccc
gccgacgacaccggcgagttccacagattgtggtcggcgcttcagttcctctactgcatt
cctgttggtgatacacaattcactgtcgaggagctattcggcgagggcctccattgggcg
gggtgcactatcatcgctctgctcggccaacagcgcaggttcgaagccctggactactgc
taccatatcctgagggtgcagcgggtggacggcaagaatgagaacgtcaaaggaatccca
ctgaaaagcatggtggaccgtatccgtcggttccaagtgctgaactctcagatcttcggc
gtcctggcgcgccacctcgccgccgacgacgagcgcgcgggcgtcgaacacgtgcgctgc
ttcccgccgccctgcgcgcctaaccactga

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