Amyelois transitella (navel orangeworm): 106140042
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Entry
106140042 CDS
T09957
Name
(RefSeq) transcription factor GATA-6 isoform X1
KO
K17897
GATA-binding protein 6
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atra03000
]
106140042
Transcription factors [BR:
atra03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
106140042
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GATA
DUF7573
Zn_Ribbon_TF
eIF-5_eIF-2B
Motif
Other DBs
NCBI-GeneID:
106140042
NCBI-ProteinID:
XP_060810272
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All DBs
Position
4:join(13105279..13106040,13106432..13106608,13106802..13107020,13107342..13107531,13107733..13107911,13108274..13108408,13109241..13109355,13109449..13109569,13110226..13110283)
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AA seq
651 aa
AA seq
DB search
MENVSPINREEPREEDASVEALQLVKNEERVEEQNIEATPAEQSPAVGRPPSPLPHSQSV
ITSRRSVRTITAAGHITETPELADEGVKDEPPEPSQLEQEQLHYAPKLEDNPDARDVAQQ
HYDEERLRLAEAESEARHHAYKQESYRSIPSPSSIDKRLQQQYRIPQRPDYRRNLTFRYG
APHQVLVGQEGEADEHAHEAFLAHKEKAEHLQVYASPAEGVPTSDGRQYGAVLSEQVAAS
SALEMIQTTSLSNQQAVGVAYQPVKYEAREGEPRPSTYASLQPVTSVHGGYSYAGQSPQY
GGAGYSAYVGGSKELLTLYGGGAPPGPGPAAGAPRGDESPPGQLLYRSDPTLSSSSLTAR
GHVVYGSVVPPTQAVYEAPPSPNSQQVTLYTHGNTVQYKVGGEHYLSQGGGVEYVPVSGY
DGGLLVTEGYAAPAQAWSTHNLLDDGFDPGMASIGEMKECVNCAAGNTPLWRRDGTGHYL
CNACGLYTRINGVNRPPLKGQKAKPQQSLQPTNGNRRVGVTCANCRTANTTLWRRNNNGE
PVCNACGLYYKLHNVNRPLSMKKDGIQTRKRKPKSMGGGHSGHVGRPGAPLTVEGHAHKV
LPPLYAAVESAGAGGAGGQPLLLLPPARHQADMVPSLERAGPSTPLHYRPP
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgtttcaccaataaatcgtgaggagcctcgggaagaagatgcttcagtggag
gcgttacagctagtcaaaaacgaagagagagtggaagagcagaacattgaggctactcct
gcggagcagtcccccgcggtgggcaggccgccgtcgccgctgccgcattcccagtccgtc
atcacgtcgcggcggtccgtccggaccatcactgcggccggacacatcacagaaacccca
gagcttgccgatgaaggcgttaaggacgagccacctgaaccctctcagctcgaacaagaa
caattacactacgcaccaaagcttgaagataaccctgacgccagagacgttgctcaacag
cattatgacgaagagagattgagactagccgaagccgagtcagaggcccggcaccatgct
tacaaacaagaatcatatcggtctataccatctccttcgtcaattgataaaaggttgcag
caacaatatagaatccctcagagacccgactacagacgaaacttgacgttccgttatggc
gcaccgcatcaagtgttggttggtcaggagggcgaagctgatgagcatgcgcatgaagcg
ttcctggcgcacaaggagaaggcagagcatttacaagtgtatgcttcgccagcggaaggc
gtgcccacgtccgacgggaggcagtacggggcggttctcagcgagcaggtggcggcgtcc
agtgccttggagatgatccagaccacgtctttgagcaaccagcaggcagtgggcgtggcg
taccagcccgtgaagtacgaggcgcgcgagggcgagccgcggccgagcacgtacgccagc
ctgcagccggtgacgtcggtgcacggcggctacagctacgccggccagagcccgcagtac
ggcggcgccgggtacagcgcctacgtcggcggcagtaaggagctgctaactctgtacggc
ggcggcgcgcccccggggccgggccccgcggccggcgcgccgcgcggcgacgagtccccg
ccggggcagctgctgtaccgcagcgaccctaccctctcctcctcctcgctcacggcgcgg
gggcacgtcgtgtacggctccgtggtgccccccacccaggccgtgtatgaagcaccacct
agccctaattcacagcaggtgacgctgtacacacacgggaacacggtccaatacaaagtg
gggggagaacactacctgagccagggcgggggggtggagtacgtgccggtgtcgggctac
gacggcggcctgctcgtcacggagggctacgcggcgcccgcgcaggcctggtccacgcac
aacctgctcgacgatggattcgaccccggtatggcaagtatcggcgagatgaaggagtgc
gtgaactgcgcggccggcaacacgccgctgtggcgccgcgacggcacgggccactacctg
tgcaacgcgtgcgggctctacacgcgcatcaacggcgtcaaccggcctccgctcaaggga
cagaaggccaagcctcaacaatctctgcagcccaccaacggcaaccggcgcgtgggcgtg
acgtgcgccaactgccgcaccgccaacaccacgctgtggcgccgcaacaacaacggcgag
cccgtctgcaacgcctgcgggctctactacaagctgcacaacgtgaaccggcctctcagc
atgaaaaaggacggcattcaaacccgaaagcgtaagcccaagagcatgggcggcggtcac
agcggccacgtgggccggccgggcgcgccgctaaccgtggagggtcacgcacataaggtg
ctgcctccgctgtacgcggcggtggagtcggcgggcgcggggggcgcgggaggccagccg
ctgctgctgctgccgcccgccaggcaccaagccgatatggtaccctcgctagagcgcgcc
gggccctccacgccgctgcactaccgcccgccctaa
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