Amyelois transitella (navel orangeworm): 106140185
Help
Entry
106140185 CDS
T09957
Name
(RefSeq) E3 ubiquitin-protein ligase Topors
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atra04121
]
106140185
03036 Chromosome and associated proteins [BR:
atra03036
]
106140185
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
atra03037
]
106140185
Enzymes [BR:
atra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106140185
Ubiquitin system [BR:
atra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106140185
UBL E3 ligases
106140185
Chromosome and associated proteins [BR:
atra03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
106140185
Cilium and associated proteins [BR:
atra03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
106140185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-ANAPC11
zf-rbx1
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
106140185
NCBI-ProteinID:
XP_013197202
LinkDB
All DBs
Position
3:complement(join(9959388..9960936,9961184..9961384,9962268..9962443,9962884..9963093))
Genome browser
AA seq
711 aa
AA seq
DB search
METVSPVAQDDSSGANPNSVKSEDSSPQHESGRGSPPPNCAICLGTCKNKSFTDSCLHQF
CFTCLLTWSKVKAECPLCKQNFKSIIHNVRSNHQYEEYMVEQRETEEDTIARFDIDNTIT
QATRRFRYRTTLTLPRRDSLAIQQLLLQAAAPLPPRGPRRRSPGSFRRTVYRHNLYARPL
PDFTGRFRDCSPQFYRYNDTQMHRLVPWLNRELHYLLNENIGHISYVITRILELLPQYHI
NSPEFRAAVQPYFRDRTEHFLHELYCFASTPYDMTGYDRNVQYTTDTRISTMINEVISSS
ESDASVDSDIVMVSSSEPAEAPPGPSRVAGPSRVPQPVYPHNYIAEPSVIPIETISHSDT
DDDSSEVMVVGYIKPPQDRTPEVVDLLGSDSDVIVQDTTPPPQPAPSAEQEPGAGSLVKL
ILKRHMAANEDSSDNDSTYRPRPRSRRRRRSGDTATTSDTWRSTPEPPREPWLPQLAQLG
NSTSDSMSSGTATTPSSKSSSEALFTDYSSSSSLSSDDRRSRPVKKKTKRKSRRETASKE
KKKSKKRTSRPRKDKVGVDKDKKSKRKTSSGKGVKSSKKHALPEAGAPEERPPVTEEQPS
TSGTSNSHKSRSDRKRRRSSRSSRENKRLKSVVNVINKKTLEEPSSSSTSLSSAVINPNS
TSVNPSSTPPLDVDLPELQSSSVAVATNDYTDSDCDDLPLNLSVQKTFHYL
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggagacagtatcgccagtggctcaggatgacagttcaggagccaatccaaatagtgtc
aagagtgaagacagcagcccacaacatgaaagtggccggggctcgccaccgcccaactgt
gcaatatgtttaggcacctgcaagaacaaatccttcacagactcatgtctacatcaattc
tgctttacgtgtcttctcacatggagtaaagtcaaagcagagtgtcccttatgcaagcag
aactttaaatcaatcattcacaatgtgcgttctaatcatcaatatgaggagtatatggtg
gaacagagggagacggaagaggacaccatcgctagatttgatattgacaatacgataaca
caagccacaaggcgctttagatacaggacaacgctaacactgccgcgtcgcgactcgctg
gcgatccagcagctgctgctgcaggcggcggcgccgctgcccccgcgcgggccgcggcgc
cgctcgcccggctcgttccggcgcaccgtgtacaggcacaacctgtacgccaggccgctg
cccgacttcaccggccggttcagggactgctcgcctcagttctacaggtacaatgacacc
cagatgcatcgattagtgccttggctcaatcgagaactccactacttattgaatgaaaat
ataggacacatttcatatgtgataacacgtatattagaattacttccgcagtaccacatc
aactcaccagaatttagagccgctgtgcagccttattttagagatagaacggaacatttt
ctccacgagctatactgcttcgcctccacaccttacgatatgacgggctacgaccgcaac
gtccagtacaccacagacaccagaatatctaccatgatcaacgaagtaatttccagctct
gaatctgacgccagtgttgattcagacatcgttatggtgtcgagttcagagcccgcggag
gctcctcccggcccctctagagtagccggcccttctagagtcccacagcccgtttatccc
cataattacatagcggagccgagcgtgattcccatcgagaccatatcgcattctgatacg
gacgacgactcatccgaagtgatggtcgtaggctacatcaaaccaccgcaagaccgaacg
ccggaagtcgtcgacttgctcggttcggatagcgacgtgatagttcaggacaccacgccg
ccgccgcagccggctcccagcgcggagcaggagcccggcgcgggctcgctcgtcaagctg
atcctcaaacggcacatggcggccaacgaggactccagcgacaacgacagcacgtaccgg
ccgcggccgcgctcgcggcggcggcggcgctccggcgacaccgccaccaccagcgacacg
tggcgctccacgcccgagccgccgcgcgagccctggctgccgcagctggcccaactcggc
aactccaccagcgacagcatgtcctccggaaccgccaccaccccctcctccaagtcgtcg
agcgaagccctcttcaccgactactccagctcgtcctccctatccagtgacgacagaaga
agtagacctgtcaaaaagaaaactaagagaaagagccgcagggagaccgcctctaaagaa
aaaaagaaaagtaaaaaacgaacttcgcgtccacgtaaagataaggttggggtagataaa
gataaaaagagtaaacgtaaaactagttcggggaaaggtgttaaatcgtcaaagaaacat
gctttgcccgaagctggtgctccagaagaacggccgccagtcacggaagagcagcctagt
actagtggcacgtctaatagccataaaagtcggagcgaccgcaaaagaagacgctcgagt
cgttcgagccgcgagaataaaagactgaaaagtgttgtaaatgtaattaataagaaaacg
ttagaagagccaagttcgagttcgacgtcattaagtagtgctgtgattaatcctaactct
acctctgtcaatcccagcagtacgcctccgttagacgtggatttacctgaactgcagtcc
agttctgtagccgtagcaacaaatgactacacagattcagactgtgatgaccttcctctg
aatttatcagtgcaaaaaacatttcattacttgtag
DBGET
integrated database retrieval system
