Amyelois transitella (navel orangeworm): 106140233
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Entry
106140233 CDS
T09957
Name
(RefSeq) iroquois-class homeodomain protein IRX-1 isoform X1
KO
K19383
homeobox protein TGIF1
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
106140233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atra03000
]
106140233
Transcription factors [BR:
atra03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
106140233
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
106140233
NCBI-ProteinID:
XP_060805504
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All DBs
Position
19:join(1376807..1376957,1382973..1383247,1383743..1383916,1384309..1384505,1385308..1385410,1385528..1385650)
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AA seq
340 aa
AA seq
DB search
MLPPTAGIAEEQRDRPGMAAFQQRRDVRELTRDIIRDGRVSNRQQSMSPGGRERFPSTSS
TDDNESGTDGEADRSRLARQILHGVHATPPPGIIAVRKRRGNLPKTSVKILKRWLYDHRY
NAYPSDAEKLTLSHEANLTVLQVCNWFINARRRILPEMIRREGHDPLHYTISRRGRKQPG
GASGSGSGVVVSWDGVEGEINEQDRTGEQEYSDGLLVYRSDGDELGDGEEGYSSNDVSEE
DVKYGAPHWNSVVRYGPEDAPAAAAGSSFRTAAVVTVRTSEASEGGWQTQIAHPLRGRIQ
VVPSAAPAEGERDKFKCLYLLVETAVAVRQREQEADHLPG
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgttaccacctacggccggtatagcagaagaacaacgcgaccggcctggcatggctgca
ttccaacaacgccgagacgttagagaattgaccagggatatcattagagacggacgagta
tcaaatagacagcaatcaatgtcgcctggaggccgcgaacgttttccgtcgacgtcatcg
acggacgacaacgagagcggcacggacggggaagccgaccgctcgcggctggcgcgccag
atcctgcatggggtacacgcgacccccccgcccggcatcatagccgtgcgcaaacgccgc
ggcaacctgcccaagacctcggtgaagatcctcaagaggtggctatacgaccacagatac
aacgcctacccgagtgatgcagagaaactgacgctcagccacgaggccaatcttactgtg
ttgcaagtatgcaactggttcataaacgcgcgccggcgcatcctgcccgagatgataagg
cgcgagggccacgacccgctgcactacaccatctcgcggcgcggccgcaagcagccgggc
ggcgcctcgggcagcggctccggggtcgtcgtgtcctgggacggggtcgagggggaaatt
aacgagcaagaccgcaccggcgagcaggagtacagcgacgggctgctggtgtaccgcagc
gacggcgacgagctcggcgacggcgaggagggctactcctccaacgacgtcagcgaggag
gacgtcaagtacggcgccccccactggaactccgtcgtgcgctacggcccggaggacgcg
cccgccgcggccgccgggtcttctttcagaaccgcggccgtggtgacggtgcgcacgtcg
gaggcttccgagggcggctggcagacgcagatcgcgcacccgctgcggggccggatacag
gtggtgccgagcgcggcgccggcggagggcgagcgcgacaagttcaagtgtctgtacctg
ctggtggagaccgccgtggccgtgcggcagcgcgagcaggaggccgaccacctgcccggc
tag
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integrated database retrieval system
