Amyelois transitella (navel orangeworm): 106140493
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Entry
106140493 CDS
T09957
Name
(RefSeq) protein Rae1
KO
K14298
mRNA export factor
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106140493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atra03019
]
106140493
03036 Chromosome and associated proteins [BR:
atra03036
]
106140493
Messenger RNA biogenesis [BR:
atra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106140493
Chromosome and associated proteins [BR:
atra03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
106140493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WD40_Prp19
WDR55
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_Nup120_160
ANAPC4_WD40
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
106140493
NCBI-ProteinID:
XP_013197543
LinkDB
All DBs
Position
24:complement(join(7614339..7614422,7614513..7614719,7616304..7616438,7617120..7617260,7617611..7617682,7617913..7618008,7618251..7618328,7618743..7618835,7619204..7619350))
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AA seq
350 aa
AA seq
DB search
MFNQMSNTSNNPNNDLEVVSPPDDTVSALEFSPASVPQTFLIAGSWDCRARCWEVEQSGK
TVPKAAQSMDGPILDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVAAHEAPVKTCHWI
KAPNYTCLMTASWDKTLKFWDTRSNVPMMTMNLSERCYCADVDYPMAVVGTADRGICLYT
LEGKPAEFKRVEAPLKHQHRCIAIFKDKKTKQPTGFALGSVEGRVAIQYVNPINPKDNFT
FKCHRSQGTTSGYQDIYAVNDIAFHPVHGTLATVGSDGSFSFWDKDARTKLKSSELLDQP
LTKCAFNHSGQIFAYAVGYDWSKGHEHFNPAKKNYIFIRPCFDDLKPRST
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaccagatgtcgaacacatccaacaatcccaacaacgacctggaggtggtgtct
ccgccggacgacacggtgtccgcgctggagttctcgccggcgtccgtgccgcagacgttc
ctcatcgccggcagctgggattgccgagcgcgatgttgggaagtagagcagtcaggcaag
accgttcccaaggcggcacagagcatggacggacccatcctggacgtcgcctggcatgat
gacggcacaaaagtgtttatggcgtccacagacaagagtgtgaagtgctgggatctggct
gccaaccagactatgcaggtagcagctcacgaagcgcccgtgaagacgtgccactggatc
aaggcgcccaactacacctgcctcatgactgcttcctgggacaaaacactcaagttctgg
gacacccgcagcaatgtccccatgatgacgatgaatttatcagaacgctgctactgtgcc
gacgtcgactacccgatggcggtggtgggcacggcggaccgcggcatctgcctgtacacg
ctggagggcaagccggccgagttcaagcgcgtggaggcgccgctcaagcaccagcaccgc
tgcatcgccatcttcaaggacaagaagactaagcagccgacggggttcgcgctgggctcg
gtggagggccgcgtggcgatccagtacgtgaaccccatcaaccccaaggacaacttcacc
ttcaagtgccatcgctcgcagggcaccaccagcgggtaccaggacatctacgcagtgaac
gacatagcgttccacccggtgcacggcacgctggccacggtgggctcggacggctcgttc
tcgttctgggacaaggacgcgcgcaccaagctcaagtcctccgagctgctggaccagccg
ctcaccaagtgcgccttcaaccacagcgggcagatcttcgcgtacgccgtcggctacgac
tggtccaagggtcatgagcacttcaacccggccaagaagaactacatcttcattcggcca
tgctttgacgacctgaagccacgctccacataa
DBGET
integrated database retrieval system
