Amyelois transitella (navel orangeworm): 106140603
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Entry
106140603 CDS
T09957
Name
(RefSeq) syntaxin-16
KO
K08489
syntaxin 16
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
106140603
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atra04131
]
106140603
Membrane trafficking [BR:
atra04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
106140603
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Prominin
DUF2207_C
Orf78
MCPsignal
TRP
Motif
Other DBs
NCBI-GeneID:
106140603
NCBI-ProteinID:
XP_060807314
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All DBs
Position
24:join(7258544..7258624,7259180..7259316,7260504..7260676,7261450..7262069)
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AA seq
336 aa
AA seq
DB search
MVSRSLTEVFLLMRNNAIHSRHIFAEQSGQSERVRLMRSSSQDAEAGVELRTESNAPPPW
TDTLEELHYVITRLKTKLSELQARHERQIRRPALDDTSEQQHIGRLTSEIGRHFNTAHSH
LTAIKAQMRHGSKTEQKLTANVVLALVTTLQELSIQFRSAQSNYLRSLTSREERSNAYFD
LPNFEELSLDDNELTGLSSNQTDLLFSLPSTSGTQKGYDDPETYEKQVMSQKQLLLLQEE
NTKMISEREEEVNKIVRSITDLNEIFKDLGQMVHEQGTILDRIDYNIEQTQTQVYEGLKQ
LQKADSYHRKNRKMHCILILAVFVVVLFALLVIVKS
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcacgaagtttaactgaagtgtttttgttaatgcgtaacaatgcaatacacagc
cgacatatattcgcagaacagagcggtcagtcggaacgtgtgagattgatgagaagcagc
tcgcaagatgctgaagcaggtgttgaactccgaacagaatccaatgcccctccaccgtgg
actgacacattggaagaactacattatgttattaccagacttaaaaccaaattgtccgaa
ttgcaagcgcgccacgagcggcagatccggcggccggcgttagacgataccagtgaacag
caacatataggaagactgacgtccgagataggaaggcatttcaataccgcacacagtcac
ttgacagctatcaaggcgcaaatgaggcatggcagcaaaacagagcagaaactaacagcg
aacgtagttctggccctcgtcacgacactccaagagttgagcatccaattcagatcagct
caatccaactacctccgttccctcacctccagagaggaaaggtcgaacgcttacttcgac
ctgccgaactttgaggaactaagtttagatgacaacgaattaaccggtctatcgagtaac
caaaccgatttgcttttttcgttaccgagtacatccggtacccaaaaaggctacgatgac
ccagagacgtatgagaaacaggttatgagtcaaaaacagttgctccttttacaagaggaa
aacacaaagatgatctcggagagggaggaagaggttaacaaaattgttagatctataacg
gacttgaatgaaatattcaaagatctaggccaaatggtacacgaacagggtactatattg
gacaggatagattacaatattgagcaaacgcagactcaagtgtacgaaggtttaaaacaa
ttgcagaaagctgatagttatcataggaaaaatagaaagatgcattgtatattaatactg
gctgtgtttgttgtagttttgtttgctttgttggtaattgttaagagttag
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