Amyelois transitella (navel orangeworm): 106140917
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Entry
106140917 CDS
T09957
Name
(RefSeq) protein serrate
KO
K06052
jagged-1
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
106140917
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
atra04090
]
106140917
CD molecules [BR:
atra04090
]
Proteins
106140917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
EGF_TEN
MNNL
hEGF
EGF_DL_JAG
DSL
EGF_2
JAG1-like_EGF2
EGF_CA
EGF_Teneurin
EGF_3
EGF_PEAR1L
cEGF
Motif
Other DBs
NCBI-GeneID:
106140917
NCBI-ProteinID:
XP_060805300
LinkDB
All DBs
Position
18:complement(join(62434..63009,63196..63534,63708..63904,64027..64518,64631..64726,64819..64920,65267..65411,65964..66322,66406..66756,67051..67184,67390..67450,67770..68021,68238..68292,69153..69284,70180..70335,78266..78331))
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AA seq
1170 aa
AA seq
DB search
MLCARARRRPLLLALALACLLPSVAGAGVFELQILEFSNYRLERAGGCCGGQPRAGAAPR
CSAPCRTRFTLCLKEYQSAAAPGACSFGRAASPALGTDSFTLAEPLYTLALPFTFRWTRS
FTLILQAYDDFNYTDPEAGLIEEAWWSGIVEPGAEWHALRHAGAAAAVAYRVRVLCQENY
FNTTCTTFCRPRDDKFGHYSCSGDGDKHCLPGWQGDNCEKPVCKEGCHPTHGRCDRPGDC
DCRPGWRGELCAQCQPYPGCKHGYCNGSSWDCTCDTNWGGILCDQDLNYCGTHEPCQHGG
TCENTAPDQYLCSCAEGFSGVDCERVDNPCAPQPCAHGACSLTAAPRGFGCACEPGWGGA
LCDQDLDDCAGQPCRNGGTCRDRLNHFVCECAPGWTGATCDEDVDECAEKGGRERSFGPC
VNAAACNNTAGGYACACLAGWTGRDCESNVDDCADQCLNGATCIDLVENFHCACAAGFAG
RTCARDIDECAPRPCRNGGECVDLRNAYRCICPVGFSGHDCEDDRDHCAGAPCANGAACY
TAQSDYYCHCAPGWSGQNCTQRQPSPPAPPRSEDCSLSGCGAGGSCLGARCVCRPGWGGD
NCDTEINECAVNPCRNNGTCIDGTGDFTCVCRDGWTGKTCSIREDAIDRCSETSCGNGGT
CVREGEGWRCACAAGWTGATCASPAGSAACPCAPGGVCVAAAGSRACVCREGWTGARCDR
PLDGCSSAPCRNGGRCVGGADWWACECAPGWGGDDCGVARLGAACEPACPPPATCARDPD
AAARCVCPPPPDRAARRCLEQLAGLGAGWEGPGERAAPGACGADNGTWWWGCNACWCAGG
APACTRLWCGLPDCLAPNAMPCRTDEVCVPAAPTLCLRAPCAPLGECRRVSGRRVEPPAL
PAPAPCWPGSRLPPPPGCARAELQLARERLARGAHVERACGALRRALAAALAARVPPAPP
LVLLCDLAPDDDDVLDLAIWVGDEDGPDDDGSGEASALGAAVRALSELVARRRLAAHALL
GAALRLRVPHVSPPAPPPAPAAQSAAPAALLALGAGVALLLLAAVGGAALLVRRRRAAAA
AERSRRCDEEKSNNLQNEENLRRYANPLREEPRARRPPDELPRAHSLYKAQNADARNDTP
PRDKELTKRALPPPAPPAPRAPPERLTVLV
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgtgcgcgcgcgcggcgtcggccgctgctgctcgccctcgccctcgcctgtttg
cttccaagcgtggcgggggcgggcgtgttcgagctgcagatcttggagttcagcaactac
cggctggagcgcgcgggcggctgctgcggcgggcagccgcgcgccggcgcagccccgcgc
tgctccgcgccctgtcgcacgcggttcacgctctgtctcaaggagtaccagtcggcggcg
gcgccgggcgcgtgctcgttcgggcgcgcggcgtcgcccgcgctcggcaccgactccttc
acgctcgccgagccgctctacacgctcgcgctgcccttcacgtttcgttggacgaggtct
ttcacattgatacttcaagcgtacgacgacttcaactacaccgacccggaggcgggcctg
atcgaagaggcgtggtggtcgggcatcgtggagccgggcgcggagtggcacgcgctgcgg
cacgcgggcgcggccgccgccgtggcgtaccgcgtgcgcgtgctctgccaggagaactac
ttcaacaccacgtgcaccaccttctgccgcccgcgggacgacaagttcggacactactcg
tgcagcggcgacggcgacaagcactgcctgcccggctggcagggcgacaactgcgagaaa
cctgtatgcaaggagggctgccacccgactcacggccgctgcgaccgaccaggagattgc
gactgccgcccgggctggcgcggcgagctgtgcgcgcagtgccagccgtaccccggctgc
aagcacggctactgcaacggctcctcctgggactgcacctgcgacaccaactggggcggc
atcctctgtgaccaagatttaaactattgcggcacacacgagccgtgccaacacggcggc
acatgcgagaacacggcgcccgaccagtacctgtgctcgtgcgccgagggcttctccggc
gtggactgcgagcgcgtcgacaacccgtgcgcgccgcagccgtgcgcgcacggcgcctgc
tcgctcacggcggcgccgcgcggcttcggctgcgcctgcgagcccggctggggcggcgcg
ctgtgcgaccaggacctggacgactgcgcgggccagccctgccgcaacgggggcacgtgc
cgcgaccgcctgaaccacttcgtgtgcgagtgcgcgcccggctggacgggggccacttgc
gacgaagacgtggacgagtgcgcggagaaaggagggcgggagcgctcgttcggcccatgt
gtgaacgcagcggcgtgcaacaacacggcgggagggtacgcgtgcgcgtgcctggcgggg
tggacgggccgcgactgcgagagcaacgtggacgactgcgccgaccagtgcctcaacggc
gccacctgcatcgacctggtggagaacttccactgcgcgtgcgcggcggggttcgcgggc
cgcacgtgcgcgcgcgacatcgacgagtgcgcgccgcggccgtgccgcaacggcggcgag
tgcgtggacctgcgcaacgcctaccgctgcatctgccccgtcggcttctccggccacgac
tgcgaggacgatagagaccactgcgcaggcgcaccctgtgctaacggagccgcgtgttac
accgcgcagagcgactactactgccactgcgcacccggctggagcggccagaactgcacg
cagcgccagcccagcccgcccgcgccgcccagaagcgaggactgttcgctgagcgggtgc
ggcgccggcgggagctgcctcggcgcgcgctgcgtgtgccgccccggctgggggggcgac
aactgcgatacagaaataaacgaatgtgctgtgaatccttgtcgcaacaacggaacttgt
atagatggcaccggcgacttcacgtgcgtttgccgagacggatggacaggtaaaacttgc
tccattcgcgaggatgccatcgaccgatgctccgaaacttcatgtggtaatggaggcact
tgcgtacgggaaggggagggctggaggtgcgcgtgcgccgcggggtggacgggcgcgacg
tgcgcgtcgccggcggggagcgccgcgtgcccgtgcgcgccgggcggggtgtgcgtcgcc
gcggcgggatcgcgggcctgcgtgtgccgcgagggctggacgggcgcgcgctgcgaccgc
ccgctggacggctgctcgtccgcgccgtgtcgcaacggtggccgctgcgtcggcggcgcc
gactggtgggcgtgcgagtgcgcgccgggctggggcggcgacgactgcggcgtggcccgg
ctcggggcggcgtgcgagcccgcgtgtccgccgcccgccacgtgcgcgcgcgaccctgat
gcggcggcgcgctgcgtttgtccgccgcctccggaccgcgccgcgagacgctgcctcgaa
caactagcgggtctgggcgcgggctgggagggccccggcgagcgcgcggcgccgggcgct
tgcggcgcagacaacggcacgtggtggtgggggtgcaacgcgtgctggtgcgcggggggc
gcgcccgcctgcacgcgcctgtggtgcggcctgcccgactgcctcgcgcccaacgccatg
ccctgccgcaccgacgaggtgtgcgtaccagcggcgccgacgctgtgtctgcgggcaccg
tgcgcgccgctgggcgagtgccggcgcgtgtcggggcgccgtgtggagccgcccgcgctg
cccgcgcccgcgccgtgctggcccggctcgcgcctgccgccgccgcccggctgcgcgcgc
gccgagctgcagctggcccgcgagcggctggcccgcggcgcgcacgtggagcgcgcgtgt
ggagcactgcggcgcgcgctggccgccgctctcgccgcccgcgtgccccccgcgccgccg
ctcgtattactctgtgatctcgccccggatgatgacgatgtattagatctcgctatatgg
gtcggcgacgaggacgggcccgacgacgacggatctggcgaggcgagcgccctgggcgcc
gccgtgcgcgcgctcagcgagctggtggcgcggcgcaggctggcggcgcacgcgctgctg
ggcgcggcgctgcggctgcgcgtgccgcacgtgtcgccgcccgcgccgccgcccgcaccc
gccgcgcagtccgccgcgcccgccgcactgctggcgctgggcgcgggcgtggcgctgctg
ctgctggcggcggtgggcggcgcggctctgctcgtgcgccgacgccgcgccgccgccgcc
gccgagcggtcgcgccgctgcgacgaggagaagtccaacaacctgcagaacgaggagaac
ctgcggcgctacgccaacccgctgcgcgaggagccgcgcgcgcgccgcccgccggacgag
ctgccgcgcgcgcactcgctctacaaggcgcagaacgcggacgcgcggaacgacacgccg
ccgcgcgacaaggagctgacgaagcgcgcgctgccgccgcccgcgccccccgcgccccgc
gcgccccccgagcgcctcaccgtgctcgtgtga
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