Amyelois transitella (navel orangeworm): 106141066
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Entry
106141066 CDS
T09957
Name
(RefSeq) DDB1- and CUL4-associated factor 10
KO
K11802
DDB1- and CUL4-associated factor 10
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atra04121
]
106141066
Ubiquitin system [BR:
atra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
106141066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_EML
Beta-prop_WDR19_1st
WD40_like
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_VPS8
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Motif
Other DBs
NCBI-GeneID:
106141066
NCBI-ProteinID:
XP_060805266
LinkDB
All DBs
Position
18:complement(join(3042955..3043098,3043627..3043758,3044346..3044490,3045042..3045206,3045666..3045745,3046328..3046484,3046609..3046751,3046947..3047006,3047250..3047399,3047552..3047921,3048884..3048997,3049170..3049402))
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AA seq
630 aa
AA seq
DB search
MYSTMANPANSSYMSRYSAFSPYWLRDREMGYGVPIGAGDAMARSLYCGMKPMASWDCDQ
ANVLPTGGVFNLEFSPEGTLLVAACEKKSIQIFDPLTHKRIHTVTGAHTDCVNCVKFLDG
RMFATCSDDTTIALWDVRNMNKKIRSLLGHSSWVKNIEFSFKDKLLVTSELNGSIYTWDI
NSYTECNLVYQRVFHAPGLMRCRLSPDARQMVMCTTGGLLVIVHNLNLSTLAKDLHGFKP
NLYRLMQSSHQLIPIAAAYDRLFEETREENRVEFVSDFPNDAKVVSSLQIHPLGWSALSR
NISHDDRSEWSCIHDIQPMEASSKSVRDCGPSARPAWSARRPPRRLRPRMRRPHAAPSTD
VPPAERERERNREEERPSNPPPLSIEDPEAGPSLAPAEVEMPANPRLQGLSSIQNDVWEA
SITIKQHRVLQELYSRGVGRNFNMQRIMGINTGIAPPAAAAAALRPRALRSAAVRLLPRA
ARGAASASDDSPSPSTSSQSRDRSSPSEDDIDPKYSIRQNRERLLYFIEETNEGKGFIKE
LCYSADGRLVCSPFGRGMRLLALNEDCSELSHCVQAFKGPVPMVDVGQSLGIHQDLVVSS
KFNPRYHMLVTGCLEGKIVWYEPYSGESMY
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgtattctacaatggctaacccagctaattcaagttatatgtcgagatactcagctttt
agtccgtactggttgagagatagggagatggggtacggggtccccataggggctggagat
gctatggccaggagtttgtattgtggtatgaagcccatggcatcttgggactgtgaccag
gccaatgtgctgccaactggtggagtctttaatcttgaattctcccctgaagggactctc
ttagtagctgcctgtgaaaagaaatcaatacaaatatttgacccactcacacacaaacgg
atccacacagtgactggagctcacacagattgtgtcaattgtgtgaaatttttagatgga
cgaatgttcgcaacatgctcagacgacacgacaatagctctgtgggatgtcagaaacatg
aataagaagataagatctctccttggccattcttcatgggtcaaaaacatagagttctct
ttcaaagacaaactccttgttacttctgaattaaacgggagtatttacacatgggatata
aattcttatactgaatgcaatttggtataccaaagagtttttcatgcacctggtttgatg
agatgccgattgtcaccggatgcgaggcagatggtcatgtgcacaacaggagggctcttg
gtcatagtgcacaatctgaacttgtcaacattggcgaaggacttacatggatttaagccc
aacctataccggctgatgcagtcgagccatcagttgatccccatcgcggcggcgtacgac
cggcttttcgaggagacgcgggaagagaaccgggtggagtttgtctccgacttccccaat
gacgcgaaggtcgtcagttcactacagatacatcctttgggttggagtgctttaagtaga
aatattagtcacgatgataggtctgagtggtcgtgcatccacgacatccagcccatggag
gccagcagcaagtctgtgcgggactgcggcccgagcgcgcggcccgcctggagcgcgcgc
cgcccgccgcgccgcctgcgcccgcgcatgcgcaggccgcacgccgcgccatcaacagat
gtgcccccagcggagagggaaagagagaggaatagagaagaagaacggccttctaatcct
ccacctctttccatcgaggatcccgaggccggaccgagtttagcgcccgccgaagttgaa
atgcctgcgaatccgcggctccaaggattatcgagtatacaaaacgacgtttgggaggcg
tctataacgatcaaacagcacagagttctccaggagttatatagcagaggcgtaggccgc
aacttcaacatgcagcgtataatgggcatcaacacgggcatagcgccgcccgccgccgcc
gcggccgcgctcaggccgcgcgcgctccgctcggccgccgtcaggctgctgccgcgggcc
gccaggggcgccgccagcgcttctgatgacagcccctcaccatcaacttcgagccagtcc
cgggacaggtcgagtcctagcgaagacgacatcgaccccaaatactccatcaggcagaac
agggaacgtctgctatactttattgaagaaactaacgaggggaaagggtttatcaaggaa
ctgtgctactcggcggacggccggttggtgtgttcgccgttcgggcgcggcatgagactg
ttagcgctcaatgaagactgcagcgaactgtcacactgcgtgcaggcgttcaaggggcct
gtgcccatggtagacgtggggcagagcctaggtatccatcaagacctggtggtgagctcc
aagttcaacccgcggtatcacatgttagtgactggatgcctcgaggggaagattgtctgg
tatgagccttacagcggggaatctatgtactag
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