KEGG   Amyelois transitella (navel orangeworm): 106141106
Entry
106141106         CDS       T09957                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106141106
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:atra03041]
    106141106
   04121 Ubiquitin system [BR:atra04121]
    106141106
Spliceosome [BR:atra03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    106141106
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    106141106
Ubiquitin system [BR:atra04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    106141106
SSDB
Motif
Pfam: SART-1 HIND
Other DBs
NCBI-GeneID: 106141106
NCBI-ProteinID: XP_060803820
LinkDB
Position
14:join(5958957..5959095,5960954..5961083,5961741..5961895,5962241..5962373,5962629..5962734,5963148..5963282,5963633..5963746,5963938..5964141,5964610..5964738,5965004..5965091,5965482..5965606,5965974..5966135,5966628..5966804,5967299..5967396,5967664..5967892,5968381..5968506)
AA seq 749 aa
MGSKKHKKESKKKKHRSRSRSPLEGEERERKKHRKHKDRKKDRSPDVEEVPVDSHLFYED
GAKHSRSRSPASERDRRARELRVRDEPAHSEKSKRTRDRSPSPATSENAGGAAQESLSIE
ETNRLRVKLGLKPLEVAEKPADDGKFKDDLGEFYHKPAANISEQKKSEKLREKLEQRKEK
RKMEQKLQTTLLADEPEEDDALAWVKKSREIERQKREAAKRAAMLDELDAEFGVSALVAE
EEKQDRAQSYVSQHLRGLRVAHDINALGDEREVVLTLADKDVLAEDSEDVLVNVNIVDDE
KYKKNIEDRKKAKAGYQAYDDEADLEAAALGYSRPVLAKYDEEIQPGDASKKKGFRIGDE
DALEAERFKEMLRRERMQGGIEKRLESLQMPELRLASDYMNEAEIQAKFKKPKRKGKLRK
KAKEEPIDVDDYDAGMAPLETDDTEVKPEQLGLPVDEHETEPDTELQAALARARRLRQEA
ATAQPRVEEILERVKEEPTFPEQEPESSMVLDATAEFCRTLGDIPTYGLAGNRDHAEQIM
DFERAEAEPEPEAEAGGRAGAWSRVQPAAERAPPPAAPLGAEPALGAGVAGALRLALSKG
YLERSGQMPAPRPANHHLLAARHYSIEDKTAGEDDKYGRRERGGYSGPLQDFREKPGFRP
NIKLEYVDDDGRPLCPKEAFRYLSHKFHGKGPGKNKQEKRIKKVVQEGLMKKMSSTDTPL
GTLQMLQEKQRETKSAYVVLSGTKRENNN
NT seq 2250 nt   +upstreamnt  +downstreamnt
atggggtcaaagaaacacaagaaggaatctaaaaagaagaagcatcgtagtcgctcaaga
tcgcctttggaaggtgaagagcgtgaaagaaaaaagcataggaaacacaaggaccgcaaa
aaggatcgttctcctgacgtggaggaagtgccggtggactcgcacttgttctacgaagat
ggcgctaaacactcgcgcagtcgtagtccagccagcgagcgagatcgccgcgctcgcgaa
ctacgcgttcgggatgaaccggcacacagtgaaaaaagcaaacgcacgcgcgatcgctcc
ccatcgcccgctacgagcgaaaacgcaggcggcgcggcgcaagagagcctctccatagag
gagaccaaccgactgcgagtcaaactcggcctcaagccgctagaggtcgctgagaaacca
gccgacgatggcaagttcaaggatgatcttggcgagttctaccacaagccagctgccaat
atctcggaacagaaaaagtcggaaaaattacgtgaaaaacttgagcagcgcaaagagaaa
cgtaaaatggaacagaaattacaaactactctattagcggacgagccagaagaggatgac
gcgctggcttgggtgaagaagtcgagggaaatcgagcggcagaagagagaggctgctaag
agagcggcgatgttggacgaactggacgcggagtttggcgtctcggcgttagtcgctgaa
gaggagaaacaggatcgcgcgcaaagttacgtgtcacaacatctgcgagggctccgagtg
gcgcacgatatcaatgcgctgggtgacgaacgtgaagtggtcctgactttggcagataaa
gacgtgcttgctgaagacagcgaagacgtgttagtaaacgtcaatattgtggacgacgaa
aagtacaaaaagaacatagaagaccgcaagaaggccaaagctggttaccaagcgtacgat
gatgaagcggacctcgaggccgctgccctgggctactcgcggcccgtgctggccaagtat
gacgaagaaatccagcccggagacgccagcaagaagaaaggcttccgtattggagacgaa
gacgcgcttgaggctgagcgtttcaaggaaatgctgcgccgcgagcgaatgcagggcggc
atagagaaaaggctggagtctctacaaatgcccgagctgagactggcttcagactacatg
aacgaggcagaaattcaagccaagttcaagaaacccaagagaaagggcaagttacggaag
aaagccaaagaggaacctatagatgtcgacgactatgacgcgggcatggcgcctcttgaa
accgacgacacagaggtgaagcccgagcagctggggctaccggtggacgagcacgagacc
gagcccgacaccgagctgcaggcggcgctggcgcgcgcgcgccggctgcggcaggaggct
gccacggcacagcccagggtggaagaaatcttagagcgtgtaaaggaagagccgacgttt
cccgagcaggaaccagagtcgtccatggtactcgacgctacggcagaattctgtcgaaca
ctgggtgatatccccacgtacggactcgctgggaaccgagaccacgccgagcagatcatg
gacttcgagcgcgcggaggccgagcccgagcccgaggcggaggcgggcgggcgcgcgggc
gcgtggagccgcgtgcagccggccgcggagcgcgcgccgccgcccgccgcgccgctgggc
gccgagcccgcgctgggcgccggggtggccggcgcgctgcggctggcgctcagcaagggc
tacctcgaacgtagcggacagatgccagcaccgcggcccgccaaccaccatctgttagcc
gcaagacattactctattgaagacaagacggccggtgaggacgacaaatacggtcgtcgt
gaacgcggtggctactcgggcccccttcaagacttccgcgagaaacccggcttcaggccc
aacatcaagttggagtatgtggacgacgacggcaggccgctctgtcccaaggaggcattc
cgctacctttcccacaagttccatggtaaaggacctggcaagaataaacaagagaaacgc
atcaagaaggtcgtgcaagaagggctgatgaaaaagatgagctccacagatactccattg
ggtacactgcaaatgttgcaagaaaaacaacgcgagacaaaatcagcttacgtcgtgttg
agcggtactaagcgcgaaaacaacaactga

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