KEGG   Amyelois transitella (navel orangeworm): 106141614
Entry
106141614         CDS       T09957                                 
Name
(RefSeq) calsyntenin-1
  KO
K22659  calsyntenin 1
Organism
atra  Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:atra00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:atra04515]
    106141614
Cell adhesion molecules [BR:atra04515]
 Cadherins
  Cadherin related
   106141614
SSDB
Motif
Pfam: CLSTN_C Cadherin Laminin_G_2 Laminin_G_3 Glyco_hydro_16
Other DBs
NCBI-GeneID: 106141614
NCBI-ProteinID: XP_060807534
LinkDB
Position
25:complement(join(303291..303358,303634..303748,304558..304748,304950..305088,306087..306185,306518..306634,308281..308912,310208..310385,311515..311642,312070..312252,312867..312947,313844..314044,314904..315050,316589..316800,318708..318829,326662..326822,494023..494107))
AA seq 952 aa
MIVRVLGVLCVGVLVASVRNVEGNNDNEDVPYLELAEPEEGYHGLIRENETLVEVTPAIR
ARGPLCSFLILNNKHHGEAPFEIMVIDENEARLRVRFPLNCEKRRNYKFDIAAVGCDGSY
SNTVPVHITVTDVNEYAPVFNQASYVKAVDEGRLYDEILRVEATDKDCTPRFGDVCKYEI
LTEKSQPFTIDNEGVIRNTEPLDYEKSHNHILSVVAYDCGMMQSAPVMVTVKVNKPCRPG
WKGIAERVDYAPGTGPLALFPAARLEACTSDERCPGVTRIQATVTLQASHQGTGCDRDTY
SLHSQRTICGLDPKTIDLLPSPGAGNEWAKSLKPDSGRDGEQMFEFDGETTSAIVPETLL
PHQLAGSFAVSVWMRHAASPDQDKHRKEHVLCLADDHKMNRHHYALFVRNCRLILLLRRD
FGDGDLNIFRPAEWRWKIPEVCDNEWHHYAINVRFPNVELFVDGEPYRADGKGPEVIDDW
PLHPAHGVNTTMVVGACWQGTESDMKHHLRGWLAGLGVLRGAVQPTRALQCVARCREGLS
LAPELYLRSVAVEGDGVADVETLLRRVAYGDGRAFPTPGRRNVHVSTTVTCDSGRVLSAR
PADSYIMVLQPQTPTILLNGSSDAARDYAHFRAGLRVFPDLMVNVVVADSDAAQRLDSCV
VSVYPALNPDHEALMLRDAADLPLKYDIKAAVTRDGVILTGADSVRNYQKVLREIEYSNK
KPAYYLNRVFKLTCSELNGRFTSNEYVQTLTVVHPHMSGEPLSRELHPSGMADKMDAVRD
KQPSHPHHVSVSQLTPRVFAAHALRDAHAADLPAARVRDLHADGAQPANHVALVIGVVSC
GVVVVLAVAGAARLRTRTPPRRAPPRRAAPAPDAEMAWDDSALTITVNPMDETAAPTCGT
HESSDGSSCSDSDSDRHDSSDEDDDGNDGRVMSGKQHKYRNISQLEWDNSTM
NT seq 2859 nt   +upstreamnt  +downstreamnt
atgattgtgagagttttaggcgttttgtgcgtcggagttttggtggcttcggtgcgtaat
gtcgaaggaaacaacgacaatgaagatgtgccgtacttggagctggcggaaccggaagag
ggctatcacgggctgatccgggagaacgagaccctcgtggaggtgaccccggcgatcagg
gcccggggcccgctctgctccttcctcattctgaacaataagcatcacggtgaagctcct
tttgagataatggtgatagacgagaacgaagcgcgacttcgcgtccgcttccccctcaac
tgcgagaagcgacgcaactacaagtttgacatcgccgctgtgggctgcgacgggtcttat
tctaacacggtaccggtccacatcacagtgaccgatgtgaacgaatacgcgcctgtcttc
aaccaggcgtcgtacgtgaaggcggtggacgagggcaggctgtacgacgagatactcagg
gtggaggccactgacaaggactgcacgcccaggttcggcgatgtctgcaagtatgagatc
ctgactgagaagagccagcccttcaccattgataacgaaggagtgataagaaacactgag
cccctggactacgagaagtcccacaaccacatcctgtcggtggtggcctacgactgcggc
atgatgcagtcggcgcctgtcatggtcaccgtcaaggtcaacaagccctgccgacctgga
tggaaaggaattgctgaacgagtggactatgccccgggcactggacccttggctctgttc
ccagctgcccgcctggaagcctgcacgtccgacgagcgctgccctggcgtcaccaggatc
caggccactgtcacactccaggcctcccaccagggcaccggctgcgaccgagatacttac
tcccttcattcccagaggactatttgtggcttggacccgaagaccatcgacttgctgcct
agcccgggagctggcaacgaatgggccaagtctctcaaacccgactcaggacgcgacggc
gagcaaatgttcgaattcgacggcgagaccacctcggccatcgtcccggagacgctgctt
cctcaccagctcgccggcagcttcgccgtctccgtgtggatgaggcacgccgcctcccct
gaccaggacaaacatcgcaaggagcatgtcttgtgtttggctgatgatcataaaatgaac
cgccaccactacgccctcttcgtccggaactgccggctcattctgctgctgaggcgtgac
ttcggagacggtgacttgaacatcttcaggcctgcggagtggcggtggaagatacctgag
gtgtgcgacaacgagtggcatcactacgcgatcaacgttcgattcccgaacgtggagctg
ttcgtggacggggagccctaccgcgccgacggcaaggggcccgaggtcatcgacgactgg
ccgctacacccggcccacggggtcaacactaccatggtcgtaggcgcttgttggcaaggg
acagaaagcgacatgaagcaccaccttcgcggctggctggccggcctgggcgtgctgcgc
ggcgccgtccagcccaccagagccctgcagtgcgtggcgcgctgccgcgagggcctcagc
ctggcgccggagctgtacctgcgctccgtggccgtggagggcgacggcgtggcggacgtg
gagacgctgctgcggcgcgtggcgtacggcgacgggcgcgccttccccacgccgggccgc
cgcaacgtccacgtctccaccaccgtcacctgcgacagcggccgcgtgctgagcgcgcgc
cccgcagactcctacatcatggtgctccagccacagacccccaccattttgttaaacggc
tcctcggacgcggcgcgggattacgcccatttcagggccggcttgagggtgttcccggat
ttgatggtcaatgtggtggtggccgattctgatgcggctcagaggctggactcgtgcgtg
gtgtcagtgtacccggccctgaacccggaccacgaggcgctgatgctgagggatgcggcc
gatttgccgctcaagtacgatataaaggcggccgtgaccagggatggagtgatactgact
ggcgccgattcagtgcgtaattatcagaaggttctccgcgagatcgagtatagcaacaaa
aagccggcgtattacttgaaccgcgtgttcaagctgacatgctcggagctgaacgggcgg
ttcaccagcaacgaatacgtgcaaacgctaaccgtggtgcacccccacatgtcgggcgag
ccgctgtcccgcgagttacaccccagcggcatggccgacaagatggacgccgtccgggac
aaacagccatcgcacccgcaccacgtgtccgtgagccagctgacgccgcgcgtgttcgct
gcgcacgcgctgcgggacgcgcacgccgccgacctgcccgccgcgcgcgtgcgcgacctc
cacgccgacggcgcgcagcccgccaaccacgtggccctggtgatcggcgtggtgtcgtgc
ggcgtggtggtggtgctggcggtggcgggcgcggcgcggctgcgcacgcgcaccccgccc
cgccgcgccccgccgcgccgcgccgcgcccgcgcccgacgccgagatggcgtgggacgac
tccgcactgaccatcactgtcaatccgatggatgagacggcagccccgacttgtggcact
cacgagtcgtccgacggctcgtcgtgctccgactccgactccgaccgacacgactcctcc
gacgaggacgacgacggcaacgacgggagagttatgtccggtaaacaacacaagtacagg
aacatcagccagctagagtgggacaacagcacgatgtaa

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