Amyelois transitella (navel orangeworm): 106142154
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Entry
106142154 CDS
T09957
Name
(RefSeq) translation initiation factor IF-2
KO
K19192
histone deacetylase complex subunit SAP130
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
atra03036
]
106142154
Chromosome and associated proteins [BR:
atra03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
106142154
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAP130_C
Motif
Other DBs
NCBI-GeneID:
106142154
NCBI-ProteinID:
XP_013199263
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All DBs
Position
12:join(4086347..4086580,4087000..4087342,4087541..4087702,4088107..4088289,4088632..4088753,4089034..4089154,4089559..4089670,4090149..4090364,4090676..4090755,4090987..4091174,4091431..4091553,4092009..4092161)
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AA seq
678 aa
AA seq
DB search
MSSNLENDRSVTTGKMYPIDLAPQKITIVKNVSSEVKMAHVIPCQPKTTSSGQIITHAGP
VGLMRPAAQILAPNVASQPQMIVSGSPILQGTQIMSQGQSTQIMSQSQLITPSGQLISPG
TQIISQGTQLSAPLNNTSNTQTSVAATVSGTQVVNMGAQLVSGPANLVMSPSVRTLPPVR
VLPPLPHHNTRPVISNMTVSSAGNVFVGKSVAVTSHTPHVPRGLAAGASLAIRQVLPGVG
SQPVNSGTAWSSNNRGPRNALVYGARGPLPRAAPRPVTPAPAFPTTPISTPAQHSAIVTL
ATTSVLTTGGVISGAIRSVAPRATTLTPTTTTAGPRALPLLQRNYPPKVLGVGSVRGVVG
NSAPAQLYYEVPRPAPTPPSPRPAAPHQVSVVNTVQSQPLPESRPPATVTPVLPRPSILR
KRDVDDSPTKTGGVGPPVYGRADGTGWEDVPTGSARGSGGSGGSTTISASSSPAPDDEPD
PPQLDGGVSPRKKPRKQMLTNEVRQCEFPQEEAPPTPPPIVPPKRPQLKSSYVCSWRATA
LHFTRPSDVRKKEPRAKDIIAIASQKHVLASADGWKVHHLTAQMEDLISLESDVSRQQGG
LLKSLETASGRVLSSLKPHSHTLLELLKSNIQRSKKVCEGIEEARDDLLKVFTHRNFVSD
ILTRQADKRSFRKHRSQS
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcaatttagaaaacgataggtcggtcactactggcaaaatgtatcctatcgat
ttggcgccgcagaagataactattgtaaagaatgtctcaagcgaagttaaaatggctcac
gttattccttgccaaccgaagacaacatcgtcggggcaaattattacccacgccggaccg
gtaggattgatgcgtccagctgcccagattctcgctcccaatgtcgcatctcagccacaa
atgattgtaagtggatcaccaattctacaaggcacccagattatgtcgcaaggacagagt
acccagatcatgtcccagtcacagttgataactccaagtgggcagttaattagtccaggg
acacagatcataagtcaaggaactcagttatcagctcctttgaataacacaagcaataca
cagacaagtgtggcggctacagtgagtggcacacaggtggtgaatatgggtgctcaattg
gtaagcggaccggccaatttagtaatgagcccttctgtacgtactctaccaccagtgagg
gtgctaccaccattgccccatcataatactagaccagtgatatcaaacatgacagtgagt
tcagcaggcaatgtgtttgtcggtaagagcgtggcggtgacaagccacacgccacatgtg
ccgcgcggactcgcagccggcgcttcactggctataaggcaagtgctgccaggagttgga
tcacaaccggtcaattcaggtacagcgtggtcgagcaacaaccgcggcccccgcaacgcg
ctcgtgtacggagcccggggcccgctgccccgcgcggcgccgcgccccgtgacccccgca
cccgccttccccaccacgcctatatcgactcccgcgcagcattctgcgatcgtcacgctc
gctactacgtctgttttgacaactggtggagtgatatccggtgcaataagaagcgtagct
ccaagagccactactctgacgccaaccaccaccacagctggacctcgtgcattgcccttg
ttgcagaggaattacccacctaaggtgttaggcgtgggcagcgtgcgcggcgtggtgggc
aacagtgcgcccgcgcagctctactacgaggtgccgcgacccgcgcccacgccgccctcg
ccgagacccgccgcgccacatcaagtgagtgtggtgaatacggtccagtctcagccgttg
ccggaaagccggccgccggccaccgtcaccccggtcctgccaagaccttccatactcagg
aaacgagatgttgacgattcgccaacaaaaacgggcggcgtgggtcccccggtgtacggg
cgcgcggacggcaccgggtgggaggacgtgcccacgggctcggcgcgcggctccggcggc
tccgggggctccaccaccatctccgcctcgtcctcgcccgcgcccgacgacgagcccgac
ccgccgcaactggacggcggcgtgtcgccgaggaagaaacccaggaagcagatgttgact
aatgaagtaagacaatgtgaattccctcaagaagaggcgcctccgacgccgccgccaatc
gttcctcctaaacgtccccaactcaagtcaagctacgtgtgcagttggcgggcgaccgcg
ttacacttcactcggccttcggacgtccgcaagaaagagcctcgagctaaggacatcata
gcgatcgcgagtcagaaacatgttctggccagcgctgatggatggaaggtccaccatttg
accgctcagatggaggatttgatatcactggaatcagatgtaagcaggcagcagggaggt
ttattgaagtcattggagacggcgtcaggacgggtactttcgtccctcaaacctcattcg
cacacattattagaattgcttaagagtaacatacaaagaagcaaaaaagtttgcgaaggt
atcgaagaagcccgagatgacctcctcaaggtgttcactcatagaaattttgtctccgac
atcctcactcgccaggctgataagcggtcctttagaaaacatagatcgcaatcgtag
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