Amyelois transitella (navel orangeworm): 106142162
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Entry
106142162 CDS
T09957
Name
(RefSeq) poly(A) polymerase type 3 isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106142162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atra03019
]
106142162
Enzymes [BR:
atra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
106142162
Messenger RNA biogenesis [BR:
atra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
106142162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
106142162
NCBI-ProteinID:
XP_013199281
LinkDB
All DBs
Position
27:join(1999489..1999612,1999891..2000120,2000665..2000772,2001220..2001331,2001822..2001980,2002872..2003083,2003802..2003922,2004458..2004634,2007127..2007234,2008433..2008488,2009087..2009248,2009802..2009957,2016926..2017063)
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AA seq
620 aa
AA seq
DB search
MSRMWPSQYSHTNHQGPPKSNEHQNQQNLKTLGMTSAISMAGPKPIDIEKTNELKESLKP
YGVFESDTEMHHRMEVLGQLHRLVRQWIRDESLRKNMPPSVADTVGGNIYTFGSYRLGVH
HRGADIDALCVAPRHIDRSDYFTSFYELLKQQPQVRDLRAVEDAFVPVIKMNFDGIEIDL
LFARLALKEIPDSFDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIDNFRLTLRAIK
LWAKRHGIYSNTLGYLGGVSWAMLVARTCQLYPNALPATLLHKFFLVFSQWKWPQPVLLK
QPDTVNLGFPVWDPRVNLSDRFHLMPIITPAYPQQNSTFNVSASTRTVIMEEFRVGLSIT
DEIMLNKSGWERLFEAPNFFSRYKHFIVLLASSANPDDQLQWCGLIESKIRHLINTLERN
QHITIAHVNPECYNSVPLNTNNGQPLAMPPGAPMPVPADPAPVVEKNENGEVMPNHCSMW
FIGLVFEKTNLNVDLTYDILSFTKAVHYQADHANMLRDGMTIEARHVRRKQLHQYLSPCL
LKRERTASSSKRKPEPPTTAQQAPAKKTKRVSETSNDEVSLLSYNEDSNSSNLFEVQLQN
GSHTDKQTDKAESSSSIAVT
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaggatgtggccgtcacagtattcccacaccaaccaccaaggtcctccgaagagc
aatgagcaccagaaccagcagaaccttaagacgctggggatgacctccgctatttctatg
gctggacccaagcccattgatattgagaagacgaatgagctgaaggagtcactcaaaccg
tacggtgtcttcgaatcggatacggagatgcaccatcgtatggaggtactcggacagctt
caccgcttggtccggcagtggatccgggacgagtccctgaggaaaaacatgcctccgagc
gtggctgacaccgttggaggcaacatatacacttttggatcttataggcttggtgttcat
cacagaggtgcggatattgatgccttgtgcgtggcgccgcgtcacatagatagatcggac
tatttcacgtcgttctatgagctgttgaagcagcagcctcaggtgagagatttgcgagcc
gtggaagacgcctttgtgcctgtgatcaagatgaatttcgatggcatagagattgatttg
ctgttcgcaaggcttgctctcaaagagataccagattcgttcgaccttcgcgatgatatg
ctgctcaagaatttggaccaaaagtgcgtccgttccctcaacggttgccgtgtgactgac
gagatattgagattggtgcccaatattgacaacttcagattgaccctgcgcgccatcaaa
ctgtgggcgaaacgtcacggcatctactcgaacacgctgggctacctgggcggcgtgtcg
tgggccatgctggtggcgcgcacgtgccagctgtaccccaacgcgctgcccgccacgctg
ctgcacaagttcttcctggtcttcagccagtggaagtggccgcagccggtgctgctcaag
cagcccgatacggtcaacctcggcttccccgtctgggatcctagggtgaacctatcggac
agattccatctgatgcccatcatcacaccggcatacccccaacagaattccacgttcaac
gtgtcggcttcaacacgcactgttatcatggaggagtttagagtcggactgtcaataacc
gacgagatcatgctgaacaagagcggatgggagcgtttgttcgaagcgcccaacttcttc
tcgcgctacaaacacttcatagttctactggcgtcgtccgcgaacccagatgatcagttg
caatggtgcggactgattgagagcaagatcagacatctgataaacacgctggagagaaac
caacatataaccatagcacacgtgaatccggagtgctacaattctgtacctctcaacact
aacaacgggcaaccgttggcaatgccgccaggtgctccaatgccagtgccagcagatcca
gcgcctgttgttgagaaaaatgagaatggcgaagtgatgcccaaccactgttccatgtgg
ttcatcggtttggtgttcgagaaaaccaatctgaacgttgacctgacatatgacatactg
tcgttcaccaaagccgttcactaccaagcggaccatgccaacatgctgagggatggcatg
actattgaggcccgtcacgtgagacgcaaacagctgcaccagtatctgtctccgtgtttg
ctgaagcgagaacgaaccgcgtcctcctcgaaacggaagccggaaccaccaacaactgcg
caacaagcccccgccaagaaaaccaaaagggtatctgagactagcaatgacgaggtcagc
cttctgtcgtacaatgaggactcaaattcatcgaatctcttcgaggtgcagttgcaaaac
ggatcgcacacagacaaacagacagacaaggccgagtcgtccagctctatagccgtcacg
tag
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integrated database retrieval system
