Amyelois transitella (navel orangeworm): 106142215
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Entry
106142215 CDS
T09957
Name
(RefSeq) protein gooseberry isoform X1
KO
K09381
paired box protein 3/7
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atra03000
]
106142215
Transcription factors [BR:
atra03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
106142215
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAX
Homeodomain
HTH_23
HTH_32
Homeobox_KN
HTH_29
HTH_28
HTH_72
Motif
Other DBs
NCBI-GeneID:
106142215
NCBI-ProteinID:
XP_013199349
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All DBs
Position
17:complement(join(5037662..5037782,5042002..5042612,5043121..5043320,5044884..5045142,5045489..5045661,5057248..5057302))
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AA seq
472 aa
AA seq
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MAVSTLNMTPYFTGYSFQGQGRMNQLGGVFINGRPLPNHIRLKIVEMAAAGVRPCVISRQ
LRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPEVENRIEELKRQNPGIFSWEIRDK
LIKEGICDKNTAPSVSSISRLIRGGKRDESDPRRNHSIDGILGPSSCEDSDTESEPGITL
KRKQRRSRTTFSGDQLEALERAFTRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLR
KQLNSQQLSAFNTMSLQSAFPSVHQQYEPPTTFNAQCASWQQSYSSALGSSSVLNSALAP
SLHQSALTPPSVCQSALTAPSLHPPSSSSFASGNLTPLSHSSELTTPLQPTADTPPSSSP
TAASPSTNQSSAITYQHSTYPNPSEAVSHAYGYGDYSKQEHAMSAHNHWTSRQLSGHPQN
KLAEVSAWPENYSSFFGTNPSHYASHAHSPTEAKSGYPYLGQLGGMDMGRVH
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcggtatcgacattaaacatgactccgtattttacaggatactcttttcaagggcaa
ggtcgtatgaatcaacttgggggtgtgttcatcaacggtcgtccgctgccgaaccacatc
cgcctgaagatcgtggagatggcggcggcgggggtccggccttgcgtcatctcgcggcag
ctcagggtctcccatggctgcgtctccaagatcctcaatagataccaggaaaccggttcc
atccgccctggagtcattggaggatctaaacccagagtggcgacgcctgaagtagaaaac
aggattgaagaattgaagagacaaaacccaggtatattttcctgggaaattagagataaa
cttataaaggaaggcatctgtgataaaaacacagcaccgtcagtcagttccatttcgaga
ttaataagaggaggcaaacgggatgagtcagatcctagaagaaatcacagcatcgatggt
atattaggtccatcatcatgtgaagattcagatactgaatccgagccgggcatcactctt
aaacggaaacagcggagatcaagaactaccttttctggagatcagctcgaagccttagaa
cgtgccttcactagaactcagtatcccgatgtttacactagagaagaactggcacaaaag
accaagctgacggaagcgagggttcaggtctggttctcaaaccgaagagctcggctaaga
aaacagcttaactcccaacaacttagtgcatttaacactatgtcgttgcaatctgcattt
ccatctgtgcatcaacagtatgagcctccaacaacctttaacgctcaatgcgcttcttgg
cagcaatcttactcatcagcacttggatccagttcagttttgaactcggccttagcacca
tcacttcatcaatctgctcttacacccccttcagtatgtcagtctgcattgacagcaccg
tcgctgcatccgccttcatcaagctcctttgcgagtggaaacttgactcctctttcgcat
tcttcggaattaacaactcctttgcaacccactgcagatactccccccagttcgagtcca
actgctgccagtccgtcaacaaaccaaagtagtgcaatcacttaccagcactccacatat
cccaaccccagtgaagctgtttcccacgcatacgggtacggggactactccaagcaagaa
cacgccatgtctgcccacaaccactggacctcgagacaactaagcggtcacccccaaaac
aaattggcagaagtcagtgcctggccggaaaattatagttcgttcttcggcaccaaccct
tcccactacgcgtctcatgcgcactcgcccacagaagctaagtctggatatccttattta
ggtcaactaggcggtatggatatgggtagagtacattag
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