Amyelois transitella (navel orangeworm): 106142381
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Entry
106142381 CDS
T09957
Name
(RefSeq) leucine-rich repeat protein soc-2 homolog
KO
K19613
leucine-rich repeat protein SHOC2
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
106142381
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GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_1
LRR_4
LRR_9
Motif
Other DBs
NCBI-GeneID:
106142381
NCBI-ProteinID:
XP_013199576
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Position
12:join(9454372..9455450,9456459..9456556,9456995..9457263)
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AA seq
481 aa
AA seq
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METADEKLTGEKNGLTNGITKDVDSSYLNWAEHITIIDLSNKNLKNIDEKTKFPPNLYDL
SLSHNNLSEVPNVVLKLDKIRHLDLSYNSITYFDDTPSFCHTIEALNLSWNHLAGPPYWV
WLESPKNLSELNLNYNVNITNSLTDIYIEELLNYSVKVANIKIANCRLHTNVDLICTFER
AKSLELGVANFSSFCNVLEEIPCIGLDKCCDIERLNLQNTRIYNIKANIDMFMHLVEIDL
SMNNIGGLPKEFCNLEKLEICILSYNNLLYLPDDINKLKKLVRLHMDNNELCMLPDRIIE
LKSLEFVDLYNNCLNEVPDEIQNVKELDLAQNYFDEPDNEEYLVKKEKLRINITDRYDGR
KVERVRQDSEHSNDITDDEEEFLKSIEENNKTVYQQYDPPSSPEDWDSDKYWVPCSELHC
TTPSLSPWMFYVKQKMAEGNFCPMDAHTVPIVELVKYENKCNPKVWVEVEGQFDDYSDDD
S
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggagacagctgacgaaaaattaactggtgaaaaaaatgggttaacaaatggaatcacg
aaggatgtggatagcagctatttaaattgggcagaacatatcacaattattgatttaagt
aacaagaatttaaagaatattgacgagaaaactaagttcccgccgaatctctatgacttg
agtttgtctcataacaatttgtcggaagtgcctaatgtagtgttaaaacttgataaaata
aggcatttggatctttcatataacagtattacgtactttgatgatacacctagtttctgc
catactattgaggctctaaacctttcatggaaccatttggctggaccaccttattgggtt
tggttagaatcaccaaaaaacctgtcagaattaaatttgaattataatgttaacataaca
aactcactaactgatatctatattgaagagttattaaattattctgttaaagtagcaaat
attaaaatagctaattgtagattgcatacaaatgtagaccttatatgcacatttgaaaga
gcaaaatcactagaacttggagttgctaatttcagcagcttttgtaacgttcttgaagaa
ataccatgcataggtctagataaatgctgtgatatagaaaggctgaatctacaaaatact
agaatatataatattaaagcaaatatagacatgtttatgcatcttgttgaaattgatcta
tcaatgaataatatagggggtctaccgaaggaattttgtaatttagagaaattagaaata
tgcatattgtcttataataatttgttgtacttacctgatgatattaacaaattgaagaag
ttagttcgtcttcacatggataacaatgaactttgcatgttacctgatagaattattgaa
ttgaaaagcttggaatttgttgatttgtacaataattgcttaaatgaagtgcctgatgaa
atacagaatgtgaaagagttggatctggcgcagaattactttgatgaacctgacaatgag
gagtatttggtgaagaaggaaaagttaagaatcaatatcactgatagatatgatggaaga
aaagtggaaagagtaagacaggatagtgagcattctaatgatataactgatgatgaagag
gaattcttgaagagtatagaagaaaacaacaagacagtatatcaacaatatgaccctccg
agctctcctgaagactgggactctgacaaatattgggtgccttgttccgaactccactgt
accacaccctcactctctccctggatgttctacgtcaaacagaagatggccgaaggtaac
ttctgcccgatggacgctcacacagtgccgattgtggaattagtgaaatatgaaaataag
tgcaatcccaaagtatgggtggaagttgaaggacaatttgatgattattccgatgatgat
agctga
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