KEGG   Amyelois transitella (navel orangeworm): 106142460
Entry
106142460         CDS       T09957                                 
Name
(RefSeq) intraflagellar transport protein 140 homolog
  KO
K19672  intraflagellar transport protein 140
Organism
atra  Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:atra00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:atra03037]
    106142460
Cilium and associated proteins [BR:atra03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   106142460
SSDB
Motif
Pfam: TPR_IF140-IFT172 Beta-prop_IFT140_1st Beta-prop_IFT140_2nd TPR_IF140_C WD40_WDHD1_1st ANAPC4_WD40 WD40_CDC20-Fz TPR_14 Beta-prop_EML_2 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st WD40 Clathrin WDR90_beta-prop_4th Gln_amidase SCRG1
Other DBs
NCBI-GeneID: 106142460
NCBI-ProteinID: XP_013199673
LinkDB
Position
12:join(5252128..5252274,5252766..5253986,5254326..5255885,5256131..5256305,5256815..5256993,5257371..5257556,5257694..5257936,5258226..5258298,5258391..5258483,5259217..5259333,5259602..5259696)
AA seq 1362 aa
MTLYIDTRLSFSDANVISTVGSWHPSLPLLAIGSYNQEKGGFVTIFQENGLALEGCEWPT
LLSNQVTALAWHPSRRLLVVGWDGGELYIWLEYSWARLEAPHNAALTTVAFSIGGGRLLA
SDAAGSLSGWQSASGAPLTSFHHQLGDVITHVSYCTPRPNSDSSIRGLARAAVAGDENAL
DTLAAWRPRTTARMREGAQPDNHACYAAQDNGVILYIDQAGACSEVLNAPGNIIFMGVIN
SIYLLVAWESGGALSLTRFITAEDGLLTTDTHVRMAARNGQCIVLAGNFNVAVITGENLI
RVWDSETGDNDALPNEKEEIAAGGIFTSICYCNLSDTLCCGTSQGNLYLWRRDHRNQWKL
ISSTSIKGTVKEVTWGSEGLMNPLLHVNCITSAFILREQPVCWGYSANVWMVQKSANEIA
ICNKDNIPSSITTTITVRAFAFKDQYVALGDGKVVQIWMCSKESDTKFSLIRSFPWKTDV
LIIYNDVLVGVVNPHIECYTITGNSLGILPSSEGEGEPIGITNTNKFIVIATMDGTLKLA
EITKKGLRMPYPPKNCYQMIEDFGEVMRASVNSSGRYICLSIANAGLAPDPRLYLWDVAN
DVITNTLMSDNSSPPYQSVPIAILWDNNDPRVVAVHMRSADLDKVHLFFCHEGSLYEYKN
WCVSSEEYFMADFMLCNVHAPHVVILSQQNLKKIPMREFEGRSESDTANIRQVLDFLYYM
TTGHLEKAVVVGTNISGGKGTIIWDSLAKECVSRKRPDVGAVCLSKMGDIKGALMMRKAM
SDDNLDDTCKIAILAVNLGMTEEAENLFREAGRPDLVTRLISAKEGGLIEITNGTHEGEN
ILLIKSAQHKLAKVLWANGETGPALKLFESAGTLVPHVPRMLIAQGQASVLAQYVANSND
VSLITWWGHYLESVGDMDGALESYVRANDYGEQTRLLCHMDRIEEAEKLCHKNPASLYQM
ARYLEMQPDKTESAVKMYIKCGAISSAIRVAAEASAWNLVWRAGSSSPAHALHAASILEN
AGQAERAIAAYQKAGKPHMALKLALSSGDTNAMVAAVESLGERVEPEVAHTLAAHLRNAD
RHSHAAALLATAGQYEEALDIVEQSSAPLTEDLSERLAAPAGTSGRDALLRRLADVLGAR
GLYHQAAKRLATAGDKAGAMRWLMRSGDADRIATFAAATRDRAAQLLAADYLRRHADWRT
RPDLVRHIVHFYTRAKVYTKLAAFYADCAKMEADEFENYEKALEALKEAAKCLSKSSDPE
SGAQTVALQEQSTLVKRYLDVRKTLEAGEINTGVTGGQQLLRAVVGRSGLITEEKVLKLL
IQYALNHPEAPNFEQQLRALQKQPEEERRSTDSPDQSIEEII
NT seq 4089 nt   +upstreamnt  +downstreamnt
atgacattgtatatagatacgcgactgtcattttctgatgccaatgtaatatctacagta
ggctcctggcatccatcactaccacttcttgcaataggttcatacaaccaagaaaaaggc
ggatttgttacaatctttcaagaaaatggacttgcattggaaggctgtgaatggcctaca
ttattatcaaaccaagttacagctttagcttggcacccttcaagacgattattggttgtt
ggatgggatggaggtgaactttatatctggttggaatattcctgggctcgtctagaagct
ccacataatgctgctcttacaactgtagcattcagtattggaggaggtcgattgcttgct
tcagacgcagctggatctttatcagggtggcagtcggcttctggtgcaccattgacatcc
tttcaccatcaacttggtgatgttataactcatgtgtcttattgtactcctcgcccgaac
agcgattcttcaataagaggtcttgcccgagctgctgttgctggagatgaaaatgccctg
gatactttagcagcatggcgacctcgcactacagctagaatgagagaaggtgctcaacct
gataatcatgcatgctacgctgcacaagataatggtgtcatattgtacattgatcaggct
ggagcatgttcagaagttctcaatgctcctgggaatattatattcatgggtgtcatcaat
agtatatatcttcttgttgcttgggaatcaggaggagctttgagccttacaaggtttatc
actgctgaagatggcttgttaactacagacacccatgtcaggatggcagctagaaatggc
cagtgtatagtacttgctgggaattttaatgtagctgttattactggtgaaaaccttatc
agagtttgggatagtgagactggggataatgatgctttacctaatgaaaaagaggaaata
gctgcagggggcatctttactagtatttgttactgcaatttaagtgatactctttgctgt
ggcacttcacagggcaatctctacttgtggaggagagatcacagaaatcaatggaaactg
ataagtagcacttctattaaaggtacagtaaaagaagttacctggggttcagaaggccta
atgaatccactcttacatgtcaattgtataaccagtgcattcattttgagagaacagcct
gtctgctggggctattcagcaaatgtttggatggtgcagaagtccgccaatgagatagct
atttgcaataaagataatataccatcgagcataactactacaatcacagtgcgtgctttt
gcattcaaagatcagtatgtagcattgggggatgggaaagttgttcagatttggatgtgt
agtaaggaaagtgacacaaaattttccctcattagaagttttccttggaaaactgatgtc
ctgattatctacaacgatgttctcgtaggcgttgttaatcctcatatagaatgttacacc
atcacaggaaacagtttgggaatacttccaagttctgaaggcgaaggagaacctattggc
atcacaaacacaaataagtttattgttattgccactatggatggtacacttaagttagca
gaaattactaaaaagggtcttagaatgccatatcctccgaaaaattgttatcaaatgatt
gaagattttggagaagtgatgcgggcgtcagtaaattcatcaggcagatatatttgcttg
agcatagcgaatgcgggcctggcgccagatcccaggctctacctttgggatgttgctaat
gatgtcatcacaaatacattgatgtcagataattcaagccctccatatcaaagtgtccca
atcgcaatattatgggataataatgatccaagagtagtagctgtacacatgagatcagct
gatttagataaggttcacttatttttctgccatgaaggtagcctgtatgaatacaaaaat
tggtgtgtatcatctgaagaatattttatggcagattttatgttatgcaatgtacacgca
ccacacgtcgttattttatcgcaacaaaatctaaagaaaataccaatgcgtgaatttgaa
ggccgaagcgaatctgatacagcaaatatccgtcaagtgttagatttcctttattatatg
acaacgggtcatttggagaaagctgttgttgttggaactaatatttcaggaggtaaggga
acaataatttgggatagtttagctaaagaatgcgtatcccgtaagcgaccagatgtaggg
gcggtgtgtttgagtaaaatgggcgacatcaaaggcgctttgatgatgcgtaaagcaatg
agcgatgataatttagatgatacatgtaaaatcgccattctcgctgtaaatcttggtatg
acggaagaagcagaaaatttattcagggaggcagggcgaccagatctcgtcactagacta
atatctgcgaaagaaggcggtctgattgaaataaccaatggaactcatgaaggagaaaat
atacttttaataaaaagtgctcagcataaattggcaaaagttctatgggctaatggagaa
actggaccagctttaaaattattcgagagtgcggggactttggtaccacatgtgccaaga
atgttaattgctcaaggccaggcttcagtattggcccaatatgtagcgaattctaacgat
gtctcccttataacatggtggggtcattacctcgaaagtgtgggggatatggatggtgct
ttggaatcgtatgttcgcgccaatgactatggcgagcagactaggcttctttgtcacatg
gatcgtatagaggaagccgagaaattgtgtcataagaatccagcatccttatatcaaatg
gctcgttatttggaaatgcaaccagacaaaactgaaagtgctgtaaagatgtacataaaa
tgtggcgcgatatcgtccgccattcgcgtagcggcggaggcgagcgcgtggaatctcgtg
tggcgcgccggttcatcgtcgcctgcgcacgcgctgcacgccgcttccatattggaaaac
gcggggcaggctgaacgagctatagccgcgtatcagaaagcaggtaaaccccacatggct
ctgaagttagccctaagtagcggcgatactaacgcgatggtggcggcggtggagtcgctg
ggggagcgagtggagcccgaggtggcgcacacgctcgccgcgcacctccgcaacgccgac
cgacactcgcacgccgccgcgctgctcgccaccgccggacagtacgaagaagcgttagac
atagtcgaacagtcttcagcgccgttgacagaggatctgagcgagcgtttggcggctcca
gccggcacgagcggcagagacgcgctgctgcggcggctagctgacgtgctcggcgcgcgc
gggctctaccatcaggctgctaagcgactggccactgctggggataaggcaggcgcaatg
cgttggctgatgcgctctggcgacgcggaccgcattgcgacgttcgcggcagcaacacgc
gaccgcgcggcacaactgctggctgcagactacctgagacgccacgctgattggcggaca
cggcccgacctcgtgcggcatatcgtacacttctatacgagggcgaaagtgtacacaaaa
ctggcggctttctacgccgactgcgccaagatggaggctgatgagtttgaaaactatgaa
aaggctcttgaggcgctaaaagaagctgcgaaatgcctatcaaagtcttcggaccctgaa
tcaggtgctcaaactgtggcgctacaagaacaaagtacactagtcaaacgttacttagac
gttcggaagacattagaagctggtgaaataaataccggagtaacaggtggccagcaattg
cttcgcgccgtcgtgggccgctctggtctgataactgaagaaaaagtactgaagttgctt
atacaatacgcgctgaaccacccagaagcaccaaatttcgaacagcagcttcgagcatta
caaaaacagccagaagaagaacgccgatctactgattctcctgatcaaagcatagaagaa
ataatttaa

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