Amyelois transitella (navel orangeworm): 106142488
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Entry
106142488 CDS
T09957
Name
(RefSeq) caskin-2 isoform X1
KO
K21952
CASK-interacting protein
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
106142488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atra04131
]
106142488
Membrane trafficking [BR:
atra04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
106142488
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
SAM_2
Caskin-tail
SAM_EPH
Motif
Other DBs
NCBI-GeneID:
106142488
NCBI-ProteinID:
XP_060802770
LinkDB
All DBs
Position
12:complement(join(2998780..2999106,2999300..2999884,3000444..3000569,3001775..3001918,3002526..3002633,3003104..3003316,3003607..3003786,3004075..3004271,3006253..3006450,3089143..3089683))
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AA seq
872 aa
AA seq
DB search
MTIDRAGRPPAPRRASSTYRSYDELGIIERTRPLRYRHGGIEDLTGIESPRTYRNYEQQD
LDDITVISSEEMPKPKRKTMEGFANGFRRTFSVRSRRDEPEGIPLDTFNANCEENFASVR
GAPFGRRRSLSRERGSSFLARSSSEGDVRVPLPRAPPAAPTPRLHRCLRALGGSWKNLLL
LGGMSRGGSGAGKTATAKRVPPPAVPGDAFGTPQHRHSGSSFGSQGYASCEEQPYPQPPD
TPSHTRDDHSDYGSTVSGVSGVSGASGSLGKSPAGGGTFTFPPPSQPLTHKAAVYYHHQL
ALSDDQGIDMTQSPGRDSPGSSSGSAGSGSRHSSASLDSGRASGRIPHHHHAACHCGDTA
DRVRAMIAQGLPDADIIHAWLADLQMEEYARLFIEAGYDLPTLTRMTPEDLTAVGIKKPN
HRKRLKAELANLNVPDNLPDYIPGSLEEWLRLLRLEEYGPALVAQGYRTVVDVTQLAWED
LEDMGIVRLGHQKKILLAIKRVKDIRAGKRSISNQGSLDFTRLQPGQELYPRELHYQPWT
HARSYHKPPDLTFDALQTPHCGTDLVPIQIRHPRGKSLESLEDPSERTSHTTFSPEAGFY
YGGGQWRRSYDDGDITPTNDNAYEGGGTLPRPRGLVRPRPVAKIQATPAYRDKSPDYTYD
EIAYSARLQRVAYGASPHVARKPPPEPPKRQSSQYAQFSRFGQTTVEIHPEKSLPLSLPA
YPSSDSLSVSLDSTGLLPPPPAPSSPPRRYEEDKLRTGSDASFKSSSSTESDSIPFANEN
AGTIKQNRSQLGGRPHTVDYSSRGGLPLAGLPPRTAADMKPASSHALPEHKEEAKSTEPV
DVLNDIGNMLANLTDELDAMLEEEKRQGLADS
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgacgatagacagagctggtcgacctcctgctccccggagagcctcttccacgtataga
agctatgatgaacttggaataatagaaagaactagacctctgagatatcgacacggaggt
atcgaagatcttacgggcatagaatcacccaggacgtacaggaattacgagcaacaagat
ttagatgatataaccgtaattagttcggaagaaatgcctaaacctaagagaaaaacaatg
gaaggtttcgctaacgggtttagaagaactttctcagtaaggagtaggagagatgagcca
gaaggaattccattagatacctttaatgcgaattgtgaagagaactttgcttcggttaga
ggtgctcctttcggcagacgtagatccttgtctcgggagcgcgggtcgtcttttttggca
agaagttcttcagaaggtgatgtaagagtgcctcttccccgcgcccctcccgcggctccc
actcctcgtctccatcgctgtcttcgtgctcttggaggaagttggaaaaatcttctatta
ctgggcggcatgtcgcgcggggggagcggcgccggcaagacagcgacggcgaagcgcgtg
ccccctcccgcggtgcccggcgacgccttcgggaccccccagcaccgccactcgggctcc
agcttcggctcccagggctacgcttcttgtgaagagcagccgtatcctcaaccgcctgat
acgccttcgcatactcgagatgaccattcagactatggcagtacggtgtcaggtgtgtcg
ggagtcagcggcgccagtggcagcctgggcaagagtcctgctgggggaggcaccttcaca
ttccccccaccgtcgcagccactcacacataaagcggcggtgtactaccatcaccagtta
gcgctcagtgatgaccagggcatcgatatgacgcagagccccggccgcgacagtcccggt
tcctcatcaggttccgcagggtccggatcccgtcactcctcagcgtcactggacagcggc
agagcatcgggtcgtattcctcatcaccaccacgcggcgtgccattgcggagacacggcc
gacagggttcgagctatgatcgcacagggattgcctgacgcagacattatccacgcgtgg
cttgctgatctccaaatggaggagtacgcgcgcctgttcatcgaagctggatacgatctg
cctacattaacgagaatgactcctgaggacctgacagcggtgggaataaaaaagcccaac
caccgcaagaggttaaaggcagaactcgccaacttgaacgtgccggataacctgcctgac
tatataccgggttccttagaagagtggctacggctgctccgcctggaggagtacgggccg
gcgctggtcgcgcaggggtaccgcaccgttgttgacgtcacgcaactcgcatgggaggac
ttggaagacatgggcatagttcgtctaggtcatcaaaagaaaatattacttgccatcaaa
agagttaaagacataagagcggggaaacgaagcatcagtaaccaaggttctttggacttt
acaagactacaacctggccaggaattatatccgagggagctccattaccagccctggaca
catgcgaggagttaccataaaccccccgacctaacttttgacgccctacaaacgccccat
tgtggcacagatctggttcccatacagattcgtcacccgcgcggtaagtcgctagagagt
ctagaagacccgtcagagcggacgtctcacacgacattctcgcccgaagccggcttctac
tacggcggtggacagtggcggcgatcctacgacgacggggacattacacctacgaacgac
aacgcgtacgaaggaggcggtacactgccgcgtccgagagggctggtgcggccgcggccc
gtcgcgaagattcaagctacgcccgcgtacagagacaagtcgccggactacacgtacgac
gagatcgcttactcggcccggctgcagcgcgtggcgtacggcgcgagtccccacgtggcc
cgcaagccgccgccggagccgcccaagcggcagagctcgcagtacgcgcagttctccagg
ttcgggcagaccacggtggagatccacccggagaagagcttgccgctgagcctgcccgcg
tacccgagctcggactcgctgagcgtgtcgctggacagcacggggctgctgccgccgccg
cccgcgccttcttctcccccgaggcggtacgaggaggacaagctgaggaccggatccgac
gctagttttaagtcaagttcaagcacggaatccgacagcatcccattcgcgaatgagaac
gccggtacgataaagcagaatcgcagtcagctgggaggccggccgcacaccgtggactac
agcagccgcggcgggctgccgctcgccggcctgccgccgcggacggccgccgacatgaag
ccggcctcctcccacgccctccccgaacacaaagaagaagcaaagagcacggaaccagtc
gacgtgctcaacgacatcggcaacatgctggccaacctaacggacgaactagacgccatg
ttggaagaagaaaaacgtcaaggactcgccgattcctaa
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