KEGG   Amyelois transitella (navel orangeworm): 106142520
Entry
106142520         CDS       T09957                                 
Name
(RefSeq) DNA topoisomerase 3-alpha
  KO
K03165  DNA topoisomerase III [EC:5.6.2.1]
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra03440  Homologous recombination
atra03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    106142520
   03460 Fanconi anemia pathway
    106142520
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:atra03032]
    106142520
   03400 DNA repair and recombination proteins [BR:atra03400]
    106142520
Enzymes [BR:atra01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     106142520
DNA replication proteins [BR:atra03032]
 Eukaryotic type
  DNA Topoisomerases
   106142520
DNA repair and recombination proteins [BR:atra03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Bloom's syndrome complex (BTR)
     106142520
   FA (Fanconi anemia) pathway
     106142520
SSDB
Motif
Pfam: Topoisom_bac Zn_ribbon_GRF Toprim Zn_ribbon_Top1 Zn_ribbon_recom AIR2-like_ZnK4 Zn_ribbon_GRF_2 Zn_ribbon_PaaD
Other DBs
NCBI-GeneID: 106142520
NCBI-ProteinID: XP_013199761
LinkDB
Position
12:join(7465995..7466171,7466253..7466462,7466659..7466911,7467380..7467550,7467902..7468077,7468496..7468778,7469074..7469285,7469597..7469708,7469934..7470163,7470250..7470388,7471002..7471165,7471542..7472031,7472306..7472549,7472719..7472837,7473056..7473237)
AA seq 1053 aa
MSILLRYYGYNLKYKFYSHYSSLLLIRHKSEIMKYLNVAEKNDAAKNIAFHLSRGTARRR
EGLSQYNKIYEFETDVMGQKSQMVMSSVSGHLLALEFVGAYKGWQSCNPLSLFDAPVFKY
CPENYEKIKKTLEREVRSCQGLIIWTDCDREGENIGFEIIQVCTAIKNNLRVYRAKFSEI
TAVSVRRALQNLEEPNKNISDAVDVRQELDLRIGAAFTRFQTLRLQKVFPSKLAESLVSY
GSCQFPTLGFVVERYRAVENFVAEPFWKIKVNHTINDLSVDFTWERQRLFDQEACQVLHD
ICLENPQAKVCEVKTKPKSKWRPLPLDTVELEKLASRKLKINAKETMRIAEKLYTQGFIS
YPRTETNEFPKEMNLGQLVGLQTSDPNWGAFAQGILDSGGPTPRQGNKSDKAHPPIHPTK
YTNSLSGNEQRLYEFIVRSFLACCSKDAQGQETTVSIDVANEKFNASGLMITERNYLEVY
PYDKWSSKEIHVYQTGQTFRPTSIDMLDGSTSPPNLLTEADLIGLMEKHGIGTDATHAEH
IETIKSRSYVALADAIHFVPGLLGMGLVEGYDSMGLNISKPHLRAQLEADLKAISEGRRQ
PHQVLAEQIAKYKEVYLTVTAEANKIDSALAERFNERPSQYTPTTESLPTQMPSVLKCPK
CGSDMTVRQKKNSPDEFYIGCLSYPNCKNAVWLPSIVKTLTVLPDTCSVCGPNYKMVKFE
WRNNSISHIYPPPYTACIGGCDTTFLELLKINLSSVKQIQTQTNTNQGRSNNNQPVHSQV
NTVPVRPNINQPRQFAPPLTANRNQNSTTTRQNGNRQNFNQPRQNPPSTAGNRNQTRMPL
PRGGNNPDDNNVICGCNKPAILLTVQKQNNNFGKKFYKCAAGRDGNGCDFFLWAPESVTN
DTPPPSNSWGEHTPSGGGNTNMSRGWGITPSSSRDSYQASDNGFNCNCGIPAKKLTVHKE
GPNKGRMFYSCPNEYNNRCNFFQWADEGSALQNEWGNGGTTATRGRGRGGRGGGGGRGGG
GGRGARREGGGARRCTLCKQEGHRRDRCPNLQS
NT seq 3162 nt   +upstreamnt  +downstreamnt
atgtcaattttattacgatattatggatataacctcaagtataagttttattcacattat
tcttcattattattaatccgacataaaagcgaaataatgaaatatctgaacgtcgccgag
aaaaacgatgcagccaaaaacattgcttttcacctatccaggggtactgccagacgacgg
gagggattatcccagtacaacaaaatatatgaatttgaaaccgatgtgatggggcaaaag
agtcaaatggtgatgtcgtcggtgtctggccatctccttgctctggagtttgtgggtgcc
tataaaggttggcagtcatgtaacccattatctctctttgatgcaccagtatttaaatac
tgccctgaaaactatgaaaaaataaagaaaactttagaaagagaagtaagaagctgtcaa
ggactgatcatatggacagattgtgatcgagaaggagaaaatattgggtttgaaatcata
caagtttgtacagcaattaagaacaatttaagagtgtacagagccaaattctctgagatt
acggctgtgtctgtcagaagggcgttacaaaatctggaggagccaaataagaacattagt
gatgcggtagatgttagacaagagctagatttgagaataggtgcagcatttactagattc
caaacattgagacttcaaaaggtatttcctagtaaactggcagagagtcttgttagttac
ggctcctgtcagttccccactttgggctttgtggtggagagataccgagctgtggaaaat
tttgttgctgaaccattctggaagatcaaagtgaaccacactataaatgacttgagtgta
gactttacatgggagcgtcaaagactattcgatcaagaagcatgccaggttttacatgac
atttgtttagaaaacccacaggcgaaagtgtgcgaagtcaaaactaaacctaaatccaaa
tggcgcccattgccattagatacagtggaattggaaaaactagcgtcacggaaactcaaa
atcaacgcaaaagagacaatgcggattgctgagaaactgtacacccagggtttcataagt
tacccgcgtacggagaccaatgagttcccaaaggagatgaatcttggccagttggtgggg
cttcagaccagtgacccgaactggggggcctttgctcaggggatactggacagcggaggc
cccaccccgaggcaaggcaacaagagtgataaagctcatcctcctattcatcccacaaag
tatactaacagtttatcaggcaacgaacaacgtctatacgagtttatagtgcggtcgttc
ctcgcctgctgctccaaagacgcgcaaggccaggagaccacggtctctatagacgtggcc
aatgagaagttcaacgctagcggcttgatgattacggaaagaaattatctagaagtttac
ccatatgacaagtggtcgtcgaaggaaatacacgtttatcagacaggtcagacatttaga
ccgacgagtatcgatatgttggatggaagcacttcgcctcccaatctgttaacggaagcg
gatcttataggtctgatggagaagcatggaataggtaccgacgcgactcacgcggaacac
atagagacaataaaaagtcgttcgtacgtcgctctcgcggacgccatacatttcgtgcca
gggctgttgggcatgggccttgtggaagggtacgattccatgggactcaatatatccaaa
ccgcatttgagagcacagctggaagcagacttgaaggctataagtgaaggtagaaggcaa
cctcaccaagttttagcagaacagatagcgaaatataaagaggtctaccttacagtgacg
gcagaggcgaacaaaatagacagcgcgctggccgagcggttcaacgagcgacccagccag
tatacgcccactactgagtcgttgcccactcaaatgccttctgttctgaaatgtcctaaa
tgtgggtcggacatgactgtcagacagaagaagaacagccccgacgagttctacatcggc
tgcttgagttatccgaactgcaaaaacgccgtgtggcttcctagtatagtcaagacgttg
actgtgttgccagatacctgttctgtgtgtggtccgaactacaaaatggttaaattcgag
tggagaaacaattccataagtcacatatacccgcctccatatacagcttgcataggaggc
tgcgacaccacgttcttggaactcctcaaaattaatttatctagcgtcaaacagattcaa
acacaaaccaatacaaatcaaggacgaagcaataataatcaaccagtacattcccaagtg
aatactgttccagtgaggccaaatataaatcagccaaggcaatttgcccctccactaact
gcaaatagaaaccaaaattctacaacaactaggcaaaatggaaacagacaaaattttaac
cagccacggcaaaaccctccatcaaccgctgggaataggaaccaaactagaatgccactg
ccgaggggtggaaacaaccctgatgataacaatgtcatatgtgggtgcaacaaaccagcc
attttgctcactgttcagaagcaaaataataattttggtaaaaagttttacaaatgtgct
gcgggtcgagacggcaatggttgcgatttctttctatgggcgcccgagtccgtcaccaac
gacacgccgccaccctccaactcttggggcgaacacacgccctctggcggcggaaataca
aacatgtccagagggtgggggataactcccagctcgtctagagacagttatcaagcaagt
gataatggttttaattgtaactgcggcattcctgctaaaaagttaacagttcacaaagaa
ggccccaacaaagggcgtatgttttattcatgtcctaacgaatacaataatcgttgtaat
ttcttccaatgggcagatgaaggatccgctttacagaatgaatggggcaatggtggcacc
acagctacaagaggccgaggccggggcgggcgcggaggcgggggcgggcgcgggggcggc
ggcgggcgcggcgcgcggcgggagggcgggggcgcgcgtcgctgtacactttgcaagcag
gagggacataggagggataggtgtcccaatttacagtcctag

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