KEGG   Amyelois transitella (navel orangeworm): 106142537
Entry
106142537         CDS       T09957                                 
Name
(RefSeq) TATA-binding protein-associated factor 172
  KO
K15192  TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
atra  Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:atra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:atra03021]
    106142537
Transcription machinery [BR:atra03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     106142537
SSDB
Motif
Pfam: DUF3535 SNF2-rel_dom Helicase_C HEAT TPR_Trm732_C HEAT_EF3_N HDA2-3 HEAT_ECM29 HEAT_2 TOR1L1_N HEAT_EZ
Other DBs
NCBI-GeneID: 106142537
NCBI-ProteinID: XP_060802750
LinkDB
Position
12:complement(join(2201087..2201336,2201767..2201942,2202863..2203118,2203720..2203868,2204411..2204581,2205273..2205446,2205603..2205898,2206975..2207161,2207504..2207739,2209384..2209516,2211000..2211235,2211972..2212119,2212779..2212948,2213619..2213737,2215646..2215864,2220201..2220343,2221031..2221127,2222040..2222188,2223078..2223194,2224279..2224364,2224866..2225022,2226280..2226423,2227345..2227678,2228430..2228566,2229137..2229259,2231100..2231276,2231598..2231693,2232785..2232993,2233448..2233640,2234497..2234651,2236466..2236606,2238635..2238698,2242800..2242977,2244728..2244738))
AA seq 1876 aa
MTSRLDRLFVLLEAGVGAATRRAAARQLGEVQRAHPEELHKLLGRLMKHLKSPAWETRVA
AAQAVEAILSNVPEWKPAPFTGKTDIKSESEDTGRLRCDTFDLERVLQNGAHLMGSEGRE
YDNDEEALSPADMKEKLAKQRQQLNARLGLDVAAQLGVDLTTVYSNEDLCPSRAQPSKTE
SLRRPVQELVPTSKHLSSREINLAKRKARLAFSKQKSRDCDDPPSAPPTPPVEPDRKKIK
LEHEDLIVDTSLPVPDCSGTWAECSRWPLEGWCGALQAQLFVPSWEARHGAASALRQLLK
AKVASGAGMTSHMTREQMEEAHQEWLEDMALRLLCVLALDRFGDFVSDQVVAPVRETCAQ
TLGVCASQMTSQRVAAVAALLSRLASQPQWEARHGALLGYKYLLAAREEVATCCGAIEQL
VAGLEDAAEDVSAVAAGALVPAARALSAQGETVPHVAARLWRLLQEQDDLAAPAHSYMAL
LAALCALPQAAKMLHPIDLADVLPRLWPYLDHSTSSVRKATLQTLCTLTRPLITTEENGE
TNGDVKSEELKKGEEVNNVEEVKSQETKNDDQYLMWSPELLQEAMRHIYQRVLFEHVCEI
QDIALKVWENLLRHARLEVTLLAGCPLLATWLCLAMQPARLPVDPALLLHTPLKQERRPR
TTSTSSESSSGTSELRNQKWLLGGSEAQQQREHHVTRARTKAADMLGYLSCYLVQPAPGI
EYKAEDESPIDCYVKVIVVYLRSGSALQRLVAALVVAAWARHTAELKLYPPNIQANTTET
CSHGDDVTNCDIISRLAPPLLVNTLHTALNQSLYYDEVALNCNRILQEARDLHALMKHYK
LPVDGEEFNNILRLEQVVHLTTITQPMIASVKIKRIATTLEERRRCLQASVTQCCSEHGT
LNVSVQAALAGACAWLRCAPRQLNPVVRPLMDSAKREPSELLQRLAAAALAALLARLAGR
GASPNNKVLVNLKAFLRCDPEYTPRVSLENADEPNGDSGSGDSGAEGKTEHALHRGLDRH
NGIVTLREQQRHAERVTPRRGRPPAHSAAPHAPLTPHTPDALALDQLFSHEDEARKILRI
QRRGATLALTSLTEYFEDQLPDKLPKLWEFITEPFSTVMTDAELESQTADAAEELISRLQ
VFEAVCGSLHQKLWERLNGCATAACALTRSTYTAVRHMAARALAAMADRDSVAVMQTVMS
QLIPTLDEGPCPRARCGAAEAVARAVDALQLRLVPYIALLVLPLLGRMSDHCEAVRIMST
RCFASLIQLMPLDGAIPEPDGLSLELRERRARDKHFLEQLFNPKSIKDYKIPIKVSTELR
SYQQAGVNWLRFLYTYKLHGVLCDDMGLGKTLQSIVVVAGAHWERQQIRPPVPEMPSLVV
CPPTLTGHWVFEVTKFIPSQYLKPLQYVGTPVERERLRTRVPFHNLIVASYDIVRKDIDF
FSSIRWNYCILDEGHVIKNVKTKAFKAIKQLIANHRLILSGTPIQNNVLELWSLFDFLMP
GLLGTERQFTARYSRPILAAREPKATPHQLQAGALACEALHRQVLPFLLRRVKEDVLKEL
PPKITQDYYCELSPLQRKLYEHLSKEHMPQGITSHTHAFQALHYLQNVCNHPKLVLTAEH
PQAAAVGAQLRLQHSSLDDIQHSAKLPALKQLLLDCGIGTTTSEETETVVSQHRALIFCQ
LKKMLDIVEQDLLNKHLPGVTYLRLDGSVPPHQRHAIVTRFNNDVSIDLLLLTTAVGGLG
LNLTGADTVIFVEHDWNPTKDLQAMDRAHRIGQKKVVNVYRLITRDTLEEKIMGLQKFKL
QTANTVISSENAAMETMGTDQLLDLFQLSGARGPADPRPGPSRSVLDSLPDLWDDKQYEE
EYDMTNFIKGLNKMSA
NT seq 5631 nt   +upstreamnt  +downstreamnt
atgacttctcggttggaccggctgtttgttctgctggaagctggcgtcggcgccgccacc
agacgtgctgccgcgcgtcagttgggcgaagtccagcgtgcccaccccgaggagctccac
aagctgctcggccggctgatgaagcacctcaaatcgccggcgtgggagacacgggtcgct
gcggctcaggccgtggaagctatactgtcgaatgtcccagaatggaaaccggcgccgttt
acaggcaaaacagatataaaaagcgagtcagaggatacggggcgtctgcggtgtgacacc
ttcgacctggagcgggtgcttcagaacggcgcccacctgatgggctccgagggccgcgag
tacgacaacgacgaggaggctctctcacccgcagacatgaaagagaaactggcgaaacaa
cgccaacagttaaacgcccgacttggcttggacgtggccgctcaattaggagtagatctc
actactgtatactccaacgaagacttgtgcccctccagagctcaaccgagcaagactgaa
tcgcttagaaggccggtacaagagctagtccccacgtcgaaacacttaagttctcgagaa
ataaacctcgccaaaaggaaagcgagactggcgttcagcaaacagaagtctcgggattgc
gacgaccccccctcggctccccccacaccccccgtggagccagaccgcaagaagatcaag
ttggagcatgaggatttaatcgtggacaccagcttaccagtacccgattgttctggcacg
tgggccgaatgcagccgttggccgctagagggctggtgtggagccctacaggcccagctg
ttcgtgccctcgtgggaggcgcgacacggggccgccagcgctctgcggcagctattgaaa
gctaaagtggcttctggcgcggggatgacgtcacacatgaccagggaacagatggaagaa
gctcaccaagaatggcttgaagacatggcacttagacttctgtgtgtgctcgcattggac
agatttggtgacttcgtatctgatcaggtggtagccccagtccgtgagacgtgcgcgcaa
acgctcggcgtgtgcgcatcgcagatgacgtcacagcgagtggcggccgtggcggcgctg
ctgtcgcgcctggcctcgcagccgcagtgggaggcgcgccacggagccctgctcgggtac
aagtacctgctggccgcgagagaggaagtggcgacatgctgcggcgccatcgagcagctg
gtggcggggctggaggacgcggccgaggacgtgtccgcggtggcggccggcgcgctcgtg
cccgccgccagggcgctctccgcacagggcgagacggttccccacgtggccgcgagactg
tggcgcttgctgcaggagcaggacgatttggctgcgccggcgcactcctacatggcgctg
ctggccgcgctgtgcgcgctgccgcaggccgccaagatgttgcacccaatcgacctcgca
gatgttctgcctcgtctctggccgtatctagaccattctacatcttccgtaagaaaagcg
accctacaaactttatgtaccttgacacgtccattaattaccactgaagagaacggtgag
acgaatggagatgtcaaaagtgaggagttgaagaagggtgaggaagtgaataatgttgag
gaagttaagagtcaggaaacgaagaatgatgaccaatacctgatgtggagccctgagttg
ctgcaagaagcgatgagacatatatatcagagggtgctgtttgaacatgtgtgtgagata
caagatatagctttgaaagtgtgggagaacctcctccgccacgctcgcctggaagtcacc
ctcctggccggctgcccgctgctggccacgtggctgtgcctggccatgcagcccgcccgc
ctgccggtggaccctgcgctgttgctgcacacgccgctcaagcaagaacgccgcccacgc
accacgtcgacgtcatcggagagcagttccggcaccagcgagctgcgcaaccagaagtgg
ctgctcggcggcagcgaggctcagcagcagagggagcaccacgtcaccagggccaggacc
aaggctgcggatatgctgggctacctctcatgttacctggtccagccggcacctggtata
gagtacaaagcagaagacgagagtccaatagactgttacgttaaggtgatagtggtgtac
ctgcgttcaggcagcgctctccaacggctggtggccgcgctggtggtggcggcctgggcg
cgacacaccgccgagttgaaactatacccgcccaacattcaggcaaacacgacggaaaca
tgtagtcacggcgatgacgtgacgaactgtgacataatatcgcggttggcgccaccgttg
ctggtgaacacgcttcacaccgccctcaaccaatctctctactacgacgaagtggctctc
aactgtaacaggatattacaagaagcgcgcgatttgcacgcgctgatgaaacattacaag
ttgccggttgatggagaggagttcaacaacatattgagattggaacaggtggtgcacctg
acaacgatcacccaaccgatgatagccagcgtgaagataaagcggatcgccaccaccctg
gaggagcgccgccgctgcctgcaggcctccgtgacgcagtgctgcagcgagcacggcacc
ctcaatgtctcagtgcaagcggcgctggcgggcgcgtgcgcatggctgcgctgcgcgccg
cgccagctcaaccccgtggtgcggccgctcatggacagcgccaagcgcgagcccagcgag
ctgctgcagcggctggcggcggccgcgctggcggcgctgctggcgcggctggccggccgc
ggcgcctcgcccaacaacaaggtgctcgtcaacctcaaggccttcctcagatgtgatcca
gaatacacacctcgcgtcagtctcgagaacgcagatgagccgaatggagattcaggcagc
ggcgacagtggcgccgaggggaagactgaacacgccttgcatcgggggctggacaggcac
aacggcatcgtgaccctccgcgaacagcagcgccacgccgagcgcgtgaccccgcggcgg
ggccggccccccgcgcactcggccgccccccacgcccccctcaccccccacacgcctgac
gcgctggctctggatcagctgttctcccacgaagatgaggcccgaaagattctgagaata
cagcggcgtggtgcaacgttggctctgaccagtttgacggagtatttcgaagatcagctc
ccggataaactgcccaaattgtgggagttcatcactgaaccattctccaccgttatgaca
gacgccgaattggaatcccagaccgcggacgcggccgaagaactaatctcgcgtttgcaa
gtattcgaagctgtttgcggatccctccaccagaaactgtgggagcgtctcaatggctgc
gcgaccgccgcctgcgcattgacacgtagtacgtacacggctgtgcggcatatggccgcc
agggctttggctgcgatggccgatagggactccgtcgctgtgatgcagactgtaatgtca
cagttaatcccgacattggatgaaggcccctgcccccgcgcccgctgcggcgccgcggag
gcggtggcgcgcgcggtggacgcgctgcagctgcggctcgtgccctacatcgcgctgctg
gtgctgccgctgctgggtcgtatgagcgaccactgcgaagccgttcgcattatgtctacg
cgttgcttcgcatcgctcatacaactgatgcctctggacggggccatacccgagcctgac
ggcctgtcactagagctcagggaaaggcgagcaagggataaacatttcctggaacaactg
ttcaacccaaagtctataaaagactataagatcccgatcaaagtgtcgacggagctgagg
agttatcagcaggcaggagtgaactggctccgtttcctatacacgtacaagctccacgga
gtgttatgtgatgacatgggcctcgggaagacattgcagtccatcgtggtggtggcgggc
gcccactgggagaggcagcagatccgcccccccgtgcccgagatgccttcgctggtcgtg
tgtccccccactctcactggccactgggtcttcgaagtgaccaaattcattccgtcccaa
tacctgaagccactacagtacgtgggtactccggtcgaacgcgaacgtctgcgcacgcgc
gttccgttccacaacctcatagtggcctcgtacgacatcgtgaggaaggacatagatttc
ttcagcagtatcaggtggaattactgcattttggacgagggccacgtgatcaagaatgtg
aagacgaaggcgttcaaagcaataaaacagctgattgcgaatcataggctgattttgtcc
ggaacgccgatacagaacaacgtgctagaactgtggtcgctgttcgacttcctgatgccg
ggcctcctgggcacggagcggcagttcacggcgcggtactcgcggcccatcctggcggcg
cgcgagcccaaggccacgccgcaccagctgcaggccggcgcgctcgcctgcgaggcgctg
cacagacaggttctaccattcctactgcggcgcgtgaaagaagacgttctgaaggaactc
ccgccgaagatcacccaagactattactgcgagctcagcccgctgcagaggaagctgtac
gagcatctgtccaaggagcacatgccgcagggcatcactagtcacactcacgctttccag
gcgctgcactacctgcagaacgtgtgcaaccaccccaagctggtgctgacggcggagcac
ccgcaggcggccgccgtgggcgcgcagctgcggctgcagcactcctcgctcgacgacatc
cagcactccgccaagctgcccgccctcaaacaactcctcctggactgcggcataggcacc
acaacatcggaagaaaccgagacagtggtctcccagcaccgagcgctgatcttctgccag
ctgaagaagatgctggacatcgtggagcaggacctgctgaacaagcacctgcccggcgtc
acgtacctgcggctggacggctccgtgccgccccaccagcggcacgccatcgtcacgcgc
ttcaacaacgacgtgtccatagatctgctgctgctcaccaccgctgtgggcgggctgggg
ctgaacctgacgggcgcggacacggtgatcttcgtggagcacgactggaaccccaccaag
gacctgcaggccatggaccgcgcgcaccgcatcggccagaagaaggtggtcaacgtgtac
cggcttatcaccagggacaccctggaggagaagattatggggttgcagaaattcaaattg
caaacggcgaacacggtgataagcagcgagaacgcggccatggagaccatgggcaccgac
cagctgctcgacctgttccagctgtcgggggcccggggcccggcggaccccaggccgggc
cccagcaggtccgtgctggactccctgccggacctgtgggacgataaacagtatgaggag
gagtatgatatgactaatttcattaaaggcttgaataagatgagcgcttag

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