KEGG   Amyelois transitella (navel orangeworm): 106142576
Entry
106142576         CDS       T09957                                 
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
  KO
K03267  peptide chain release factor subunit 3
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    106142576
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atra03019]
    106142576
   03012 Translation factors [BR:atra03012]
    106142576
Messenger RNA biogenesis [BR:atra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     106142576
Translation factors [BR:atra03012]
 Eukaryotic type
  Release factors
   106142576
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 PAM2 MMR_HSR1 G-alpha
Other DBs
NCBI-GeneID: 106142576
NCBI-ProteinID: XP_013199832
LinkDB
Position
12:complement(join(5666061..5666104,5666332..5666500,5667185..5667289,5667485..5667643,5667922..5668125,5668781..5668898,5669526..5669680,5670136..5670281,5670530..5670676,5671095..5671200,5673369..5673586,5674742..5674985))
AA seq 604 aa
MSNNGAPDSWESQADLIGEQGAKDPNDVSTKFSTLNVNAVEFVPSFCKPSQGSDNTDSDS
PTTPQKSESPSTNSAASPVLNGCGDGGGESGDNGAASASPRVEEPPPVPAVAAAAPPVPP
DVSPTADSWEAEADDALLTPEESNEPDEEEVDQQEDGETAKKIPKKKPPRVEDTRSKKEH
VNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSRESWYLSWALDTNQEER
DKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISARKGEFETGF
DRGGQTREHAMLAKTAGVKHLVALVNKMDDPTVNWDEKRYNECRDKIMPYLKKLGFNPAK
DLSFLPVSGQTGQGLLERVSEEICPWYRGPSFIQLIDELPSLNRKMDGPFIMPVVDKYKD
MGTVLMGKVEAGTTRKGAILFLMPNRAQVNVDQLWSDDIEVTSIGPGENVKVKLKGIEEE
DVSPGFVLCDVTEPITTGRIFDAQVVILEHKSIICAGYSAVMHIHCAAEEVTVKALICLV
DKKTGEKSKTRPRFVKQDQVAIMRIECAGVICLEPFKKFAQMGRFTLRDENKTIAIGKVL
KVIE
NT seq 1815 nt   +upstreamnt  +downstreamnt
atgtccaataacggtgctccagactcctgggaaagtcaagcagacctaataggtgaacaa
ggtgcaaaggatcccaatgatgtgtccaccaaattttccacgttgaatgtaaatgctgtg
gaattcgttccttcgttttgtaaaccttctcagggtagcgataatactgattctgactcc
cctactacaccacaaaaatctgaaagtccgtctactaattctgcggcaagtcctgttttg
aatggttgcggcgacggcggcggcgagagcggagacaacggggccgcgtcggcgtccccg
cgtgtggaggagcctccgcccgtgcccgccgtggcggccgcggcgccccctgtcccgccc
gacgtgtcccccacggccgacagctgggaggcggaagccgacgacgctctacttacccct
gaggaaagcaatgaaccagacgaggaagaggttgatcaacaggaggatggtgagacggcg
aaaaagattccgaagaaaaaacctccccgagtggaggatacgaggagcaagaaagagcat
gtaaatgttgtatttattggacatgtcgatgctggaaagtctacaattggtggtcaaata
atgtcgttgactggaatggtggacaagagaacattagagaaatacgagagagaggcgcgt
gagaaatccagggagtcttggtacttatcgtgggccctcgacactaaccaagaagaacgt
gataagggtaaaactgtagaagtggggagagcatacttcgagactgagaagaagcatttc
acaattcttgatgcaccaggtcacaagagttttgtaccgaacatgataggtggcgcggcg
caggctgaccttgcagtattggtaatatctgcgcgtaaaggtgaattcgaaacgggattc
gacagaggggggcaaactcgtgagcacgctatgttggccaagactgcgggcgtgaaacac
ttggtcgcgcttgtcaacaaaatggacgaccccaccgtcaactgggatgaaaagagatac
aatgaatgtcgtgacaaaattatgccatacctcaaaaagttaggattcaatccggccaag
gacctttccttcttacccgtgtctggacaaactggtcaaggcttattggaaagagtgtct
gaagaaatctgtccatggtacagagggccctcatttatccagcttattgacgaattgcca
tcactcaaccgcaaaatggatgggccatttatcatgccagtcgtagacaagtataaggat
atgggcacggttctaatgggaaaagtcgaggcaggaactacgcggaagggagctatctta
ttccttatgcctaacagagcacaagtaaacgtcgaccagttatggtcggacgacatagaa
gtgacttctattggacctggtgagaatgtcaaggtgaaactcaaaggaattgaagaggag
gatgtgtcacctggatttgttttatgcgacgttacagaacctatcactacaggcagaatt
ttcgatgctcaagttgtgattttagagcacaaatcgatcatctgcgcaggttactcggct
gtcatgcacatacattgtgcggctgaggaagtaactgttaaggcacttatttgtttggtg
gacaagaagactggtgagaagtcgaagacgagaccgcgtttcgtaaaacaggaccaagtg
gcgatcatgaggatagagtgtgcgggcgtcatctgtttggagcccttcaagaagttcgcc
caaatgggcaggtttacacttagagatgagaataaaactattgctattggaaaagtacta
aaagtgattgagtaa

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