KEGG   Amyelois transitella (navel orangeworm): 106142591
Entry
106142591         CDS       T09957                                 
Name
(RefSeq) small subunit processome component 20 homolog
  KO
K14772  U3 small nucleolar RNA-associated protein 20
Organism
atra  Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:atra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:atra03009]
    106142591
Ribosome biogenesis [BR:atra03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    106142591
SSDB
Motif
Pfam: UTP20_N UTP20 UTP20_C HEAT_EF3_GNC1 HEAT
Other DBs
NCBI-GeneID: 106142591
NCBI-ProteinID: XP_013199858
LinkDB
Position
12:join(3254397..3254441,3255574..3255860,3256136..3256469,3256648..3257877,3257974..3261425,3261674..3261838,3262404..3263451,3263816..3264042,3264435..3264600,3265502..3265684,3265897..3266445,3266815..3267003,3267209..3267469,3267994..3268179)
AA seq 2773 aa
MKSKPVKHKTTNTFRFVPFAERINAIDIRHAALYHIEHAYTRQPEENETHFHLALQKWNV
LNLTENFKKFRKEVLGIVTVPQLLHKKEEVLEALEKYLKLEDQLCLQPLLEILVSLAKDL
RNDFYPHFPRFLDILIVLLNTKDAERLEWTLICLAFLFKVLKPYLKKDIAIVLKKIIPLL
SESHPQYINNFAAESFAFVARDIKDKKKFIDLILNYLKTNEDAISGCGHLVFEILRGVSG
KFHSCIETFLPVLLTSLKDDEDHQGILFKVLTQSLEDSLQTISPKEYNIFWTCILKFTED
ILKEDDEHIKGLEYILRLAGQVIEHEHGKYLTSPPQFVLLLVKVICEQTAENVLEVCAQI
GALLLLSPKVSLSQEHAGIIVKVLLPLPYPSILINFVKNVIDYPQFDMHILPPFLNFVVQ
SNFDNEAMSTLTKICVRKSPLSKNGIKLFEWVKYPLDFDKCLPMFMEYFDSVINDNIENI
VEHPTKLMNVLFCLPHVEKVNVNHCITSINGLISKLLNVLSSYNLENQPDHNKFHCDTTA
LSRCTRLVLFIIVNAMESAIHISSCKKLNEICDIVVLLPMILPCAADPNYLAALHLLDLY
LTAYEHDNGLKYSQLTLVDLYLRNNVSSPFHIVRLLTTHIYKLFENVEELNKTVEVGGSE
ERFEIFSRCFTVESTNPSIQEYRSQINMLQKMAFNTTQYVLAKDTDFKYFALNYMLGVLY
FNFKLLWEPVSEYIAGYGNALTVDEFWPTFYKALETSFANAKKDLKKFQFDDEIDRNNIH
LKELYAEFNSIFERPDLYNYRNLLLKIMTNCIQPCEARNRDVVVLFLNFIEEEYRKNDNT
NALKIDIELRNNTQMEVDEEKPGEENIEDQVESIEETTETVSGKIIFKTLINIMQVLAQL
KNPRALHKEPVFWELYMEFLKHKNPGLQKYALDCVLNYKNKSVTPYKNNLQNLVDENKLK
DELTLFKITEDSKSIQPEDREHVVPIILRILYGKMTSKLGADKKGGGQTRRSLVMRYLAG
CNENELKMFIEMAFSQFKQFMSIEPNEILNNMMSTLDLKSVTSPGKLHSVLNLFEVVREY
FGGYMKDELLGQLFKVFYAVCSTVASVLAQGERVHIAYTKVMKNLRTLSLGTLRKLFEQF
DKYPWSKDELQLLFETLLWPTIPKLHIEGIHSPTALLKLFNEWCQNPRNYILLITCSKED
NTLSALPAIFKLLLAPKTTPGVVNMILDMIEKLLTLTEDDEEKDIPAIETFSALSFDRSM
ETDAPLNINFGSKILIPHIPDILEVMKRRIANSAKSNTVNKRDLLILSRVTELVSTPELC
DELLNLLLPILVRKVCMNMAEENMEHAVTTIINLLGHSTNPKIYIKNIAVLFNRVSLVDV
RKLLIKLLFSIAENAKDNKETLSRLANIVSEMNAFNARWIEQPDFDRRLDAYKQIYKLAE
TNDIDVDLAILIVNNCFYFIRTEKDIGLRDGAGLCLKRILPKLMSKYWSTNDGQFLVRDT
VLSLISTGIRDSKNEIIRNESLALLGELARECPEADVVLSDLAYLTNKEDIEVDFFENMC
HLQMHRRVRALMKFCKVAKKMIKCPTPRTLTNFILPLATTYVCDDKYTDKNTLIDACIEV
ISTCCRLLPWYHYEVILKLYLNKMRHSTDHQKQLTRILIGIIDAFHFDFSKVKSIELPKA
LVSNMESGKVEIKVNTDDSAQEKDVNEGQDVDKSVQDVNDKEANLEGNIESELKEADNEA
ENDESIKEVSNVPAFERVTCVSPSVAKRIIKSLSAGLLPQLHRAIGKMTDHEESHKVNRR
RTGLERQEEDMLRVPIALALVKLLQQLPGDVLRHQLPGIIIKLCSFLKSPLKQVRIAARD
IVKKVMVTVGTGYLKILLEHLTLLLTKGFQVHVLVSTIHTVLDALKSDFKSGELNDSIQY
ILDVCTNDLFGVLSEEKEVDKLHYKTPEAKPSKKSYVTLMIVSQNITENCLINLLLPFKE
VLQKHHSKKIVVKVQEALTHISSGLVTNKFIDIESLFIFLHGIASESIPEFVLHAPKREI
TEAQKEKMLRAKPDCFIIPETPKRNKESQAKHVKTSSKANAHVLVEFSLNILYVLLKREK
VPRMDCRAFVDPLIPLLVDSLKSDHVKVTTVAMKCIATLWTIRVSTPTLEEMTEDIVKTI
FLILHKYATFEISKQNDNFHLVRNAFKAITVLIRNVKYHRLDNDQLKTLLLYAEEDCQND
DRQANSFSLLKAILEAKLISNELHEVMEKVSKICILSESARSRDEARGIFVSYLTNYSPG
KRMDKYIQFFVSQLNYELQHGRESSLKFLEMIISKLSEQNLSIQSDYLLLALGASMLNDS
APECRSAAAGCIEAMLKRLPLLQRNKLFDLVLKFFEDKQPVHFELAAQLSTRFVNVEEEE
FKNRLNIVLPIVSGKILLLGNDITEGRFVKIQLEQSDDKTDEEKQKEKDHSLIQMLNLIE
KITVSCPSTLKNNKFLSDYDDLAQQCQVLLAYPHAWVRLKAAKILGAVLSTVDPADLDLV
VRKKVDSERGFLYYDTEDKIRSIVLDLCAQYTPAITQEMAEQVTTVLFLILKLVHSMSSF
KLTDKARIEEDQAETTAKVNIRWILFKLRKAVNVEVAKAPNSMNIRSSIFTMWMHLISSL
ETEVLHKIIDVILPPLVRELSTGDPLSPASVAKQLASRLGKKLRRKIGDLEYSKMVADVQ
TRLNIRRAERKKLLLQEKVNNPEKAAKRKLQLKEKKKQSKKMKLEMLHGKRPRPKKRKAE
EIDIEDQLLKDDN
NT seq 8322 nt   +upstreamnt  +downstreamnt
atgaaaagcaaaccagtaaaacataaaactacaaatacatttcggtttgttccatttgct
gaacgaataaatgccatagatataagacatgctgccctctaccacattgagcatgcatac
acaagacaacctgaagaaaacgagactcacttccatttggcccttcaaaaatggaatgtt
ctaaatttgactgaaaactttaagaaatttaggaaagaagtattgggcatagtgacagtg
ccacagttgctacataagaaggaagaagttttagaagctttggaaaaatatttaaaatta
gaagaccagttatgtttgcagcccttgctagaaatattggtttcattagcaaaggatcta
aggaatgatttctacccacactttccaagatttttggatatacttattgtacttttgaac
acaaaggatgctgagagactagaatggactttaatctgtcttgctttcctttttaaagtt
ttaaaaccatatttgaaaaaggacatagccattgttctaaagaaaataataccattgttg
agtgaaagtcacccacagtatattaataattttgcagcggagagttttgcttttgttgct
cgtgatattaaggataagaagaaattcatagacctaatattgaattacctgaaaacaaat
gaagatgccatatcagggtgcggtcacctagttttcgaaatattgaggggagtgagtgga
aagtttcacagctgcatagaaacattcctccctgttttattgacttccctaaaagatgac
gaggaccaccaggggatattgttcaaagtactcacacagtcccttgaagacagcttacag
accatctcaccaaaggaatacaatatattttggacatgtattttaaaattcactgaagac
atactcaaggaagatgatgagcatatcaagggcttagagtacatattaagacttgctgga
caggtcattgaacatgaacatggaaaatatttaacaagtccccctcagtttgttcttcta
ttggtaaaagtaatatgtgaacagactgctgagaatgttctagaagtttgtgcgcagatt
ggtgcgctgttacttctttcgcccaaagtgtcactttctcaagaacatgctggcattatt
gtcaaagtcttactgcctttaccataccccagcattctgataaattttgtcaaaaatgtg
attgattacccccaatttgacatgcacattttgccgccgttcttaaatttcgtcgtacaa
tcaaattttgataatgaagctatgagtacactaactaaaatctgtgtcaggaaatctcca
ttatccaagaatggtataaaactatttgagtgggtcaaatatccccttgattttgacaag
tgtttaccaatgttcatggaatactttgatagtgttataaatgataacatagagaatatt
gtggagcaccctacaaaactgatgaatgtgctgttttgtttgcctcatgttgagaaagta
aatgttaaccattgcatcacaagtataaatggccttatatcgaaactgttgaatgtttta
tcaagttacaatctcgagaatcagcctgatcataataagttccattgtgacacaacagca
ttgtcacgctgtactaggttggtgcttttcataattgtgaatgcaatggaaagtgcgatt
catatatcgagttgtaagaaattgaacgagatctgtgatattgttgtgttactgccaatg
atattaccttgcgcagcagaccctaattatttggcagctttacacttgttggatttgtat
ctgactgcttatgaacatgataatggattgaaatactcacaacttaccttggtggatttg
tatttgaggaacaatgtgtcttcgccatttcacattgttcgacttctaactacccacatt
tacaaattgtttgaaaatgttgaagagttaaataaaactgtagaagttggtgggtcagaa
gaaaggtttgaaattttcagtaggtgttttacagttgagtctacaaatccatctattcaa
gagtacagaagccaaattaatatgttacaaaaaatggcgttcaacactacacaatatgtt
ttagctaaggatactgattttaaatattttgccctaaattatatgctcggagttttatac
ttcaacttcaaattactctgggaaccagtgtcagaatatattgcgggatatggcaatgct
ttgactgttgatgaattctggccaacattttacaaagccttggaaacgtctttcgctaac
gctaaaaaggatttgaagaagtttcaatttgatgatgaaattgatagaaataatattcat
ctaaaagaattgtatgctgagttcaatagtatttttgagagaccagatttgtataactat
aggaatcttttgttgaaaataatgacaaattgtatacaaccatgtgaagcaaggaatcgt
gatgttgttgttttgttcctcaattttattgaagaagagtatagaaagaatgataacacg
aacgctctgaaaatagatatcgagcttagaaataatactcaaatggaagttgatgaagaa
aaacctggtgaagaaaatattgaagatcaggttgaatcaattgaagaaacaacagaaaca
gtttctggcaaaataatatttaaaactcttataaatattatgcaagtactagctcaatta
aaaaatcccagagctctccataaagaaccagtgttttgggaactttacatggagtttttg
aaacacaagaatcctggtcttcaaaaatatgccttagattgtgttctgaattataaaaac
aaaagtgttacgccatataaaaataatttgcagaatttagttgatgagaataagttgaaa
gatgagcttacattgttcaaaattactgaagattccaaaagcattcaaccggaagataga
gagcatgtagtacctattattttgaggatattgtatggaaagatgacgtcaaagttagga
gcagacaaaaaaggaggcggtcaaactaggaggtcactagttatgaggtatttggcaggt
tgtaatgaaaacgagctgaaaatgtttatagaaatggcattttctcaattcaagcaattt
atgtctatagaacccaatgaaatcctaaataatatgatgtcgactttagatcttaaatct
gttacaagtcctggaaaacttcatagtgttttaaatttgtttgaagttgtccgagagtat
ttcggaggttacatgaaagatgaactgcttggtcaattatttaaagttttctatgcagta
tgttctactgttgcaagcgtattagctcaaggagaaagagtccatattgcatatacgaaa
gtcatgaaaaaccttagaacactttcattaggaacactcagaaaattgtttgaacaattt
gataagtatccatggagcaaagatgaattgcaattattatttgaaacattgctttggcct
acaatacctaaacttcatattgaagggatacatagcccaacagcgttgttgaaattattc
aacgaatggtgtcaaaatcccaggaattatatattattaattacttgctcaaaggaagac
aatacattaagtgccttaccagctatatttaagttacttttagctcctaaaacaactccg
ggcgtcgtcaacatgattcttgatatgatagagaagctattaactttaactgaggatgat
gaagaaaaagatataccagcaattgaaacatttagtgctttatcatttgatagaagtatg
gagactgatgcgccacttaacatcaactttggaagtaaaattctgattccacatatacct
gatattttggaagtgatgaaacgtcgtattgctaattcagctaagtcaaatacagtgaat
aagagagatttacttatactttcaagagtgacagaactggtatcaactccagaactttgt
gacgagttactaaatttactgcttcccatattagtaagaaaagtatgtatgaatatggca
gaagaaaatatggagcatgctgtaacgacaataataaatctgctaggccatagcacgaac
ccaaaaatttatattaaaaatatagcagttttattcaatagagtgtcactggttgatgtt
agaaaactacttattaaacttcttttttctatagctgaaaatgcgaaagacaataaggaa
acactatctcggctagctaacatagtttccgaaatgaatgcatttaatgcaagatggata
gaacagcctgattttgatagaaggctagatgcttacaaacaaatatataaattagcagaa
acaaatgacattgatgtggatctagcaatattgatagttaataattgcttttatttcatt
cgtactgagaaagatattggtttgcgcgatggtgctgggctatgtctgaagaggatttta
ccaaaattgatgtccaagtattggtcgacaaatgacggtcaatttttagtacgcgataca
gttttgtcacttatatctacgggcataagggattctaagaatgagataattcgaaatgaa
agtttagctttgcttggggagcttgcaagggaatgtccagaagcagatgtcgtcctttct
gatctagcttatctaacaaataaagaagatatagaggttgatttctttgaaaacatgtgt
cacctgcaaatgcatagacgcgttagagcactaatgaaattctgtaaagtagcgaagaaa
atgataaagtgcccgacacccaggactttgacgaatttcatattgccattagcaacgact
tatgtatgtgatgataaatatacagacaagaatacattgattgatgcttgtattgaagtg
atttctacatgctgtcgattactcccttggtatcactatgaggtgatattaaaactgtat
ctgaataaaatgcgccattccactgaccatcaaaaacagcttacacgtattttgataggc
atcatagacgcgttccattttgatttttccaaagtgaaaagtattgaattgcctaaagca
ttggtttcaaacatggaatcgggaaaagttgaaattaaggtgaatactgacgatagcgct
caagagaaagatgttaatgaaggtcaggatgttgataaatcagttcaagatgtaaatgat
aaagaagctaatttagaaggaaatatagaatctgagttgaaggaagcagataacgaggcc
gaaaatgacgaaagtattaaggaagttagtaatgtgccggcgttcgagagagtcacttgt
gtatcgccttctgttgctaagagaattattaagtcactttcagctggtttgctacctcag
ttgcatagagcaataggcaagatgaccgaccacgaggagtcgcacaaggtgaacagacga
cgcaccggtctagagagacaggaggaggacatgctgcgagtgcccattgccttggcgttg
gtgaagctgctgcaacagttgcccggggatgtgttgaggcatcagttacctgggatcata
attaagttatgctcattcctgaaatctccgttgaagcaagtcagaatagcggctcgtgat
atcgttaagaaagtgatggtcacagttggcaccggttatttgaaaatactgcttgaacat
ctcactttattactcacaaaaggattccaagttcacgttcttgtttccacgatacacact
gtattagatgcgttgaaatcagatttcaaatctggcgaattaaatgatagcattcaatat
atcctcgatgtgtgtactaatgatctatttggagtgttatctgaagagaaggaagtcgac
aaactacattacaaaacgcccgaagcgaagcctagtaaaaaaagttacgtgacactcatg
attgtatcacagaatataacagaaaactgtctaataaacttattgctacctttcaaagaa
gtattacaaaaacatcactcgaagaaaatcgttgttaaagttcaagaggccctaactcat
atatctagtggattagtgaccaataagtttatagatatcgaatctttattcatatttcta
catggtattgcgtcagaaagtataccagaattcgttttacacgcgccgaagagagaaatc
actgaggcgcaaaaggagaagatgttgagagcaaaacccgattgttttattattcctgaa
acgccaaaacgtaataaagaaagtcaagcgaagcacgttaaaacttctagtaaagctaac
gctcatgtgttggttgaattcagtttgaatatactgtatgttttgcttaaaagagaaaag
gttccaagaatggattgtagagcgtttgtggatccattgattcctttgttagtcgattca
ttgaagagcgaccatgtcaaagtaacaacggtggctatgaaatgtatcgctacattgtgg
actattagagttagcacgccgactttggaagaaatgaccgaagatattgtgaagacaatt
ttcttgattctgcataagtacgcgacatttgaaataagcaagcagaatgataattttcat
cttgtgaggaatgctttcaaggctataacagtgctcattcgcaacgtgaaataccatcgt
ttggacaacgaccaactcaaaacactgctgctatatgccgaagaagactgccaaaatgat
gatagacaagccaattcgttttctttactaaaagcgatactcgaggcgaagttgatatcg
aatgagctgcatgaagttatggagaaagtgtcgaagatttgtatactgagcgagtccgct
aggtctagggacgaagcccgcggtatattcgtgtcttacctgaccaactattctccaggc
aaacgtatggacaaatacatacagttcttcgtgtctcaacttaactatgaactacaacat
ggtagagagtcctcactcaagttcttagagatgattatcagtaagctatcagagcaaaat
ctgtcaattcaaagtgactacctactcctcgctcttggcgcttcgatgttaaacgacagc
gctccggaatgccgttcagccgctgcgggatgtatcgaggcgatgttaaagcggcttcca
ctgcttcaaaggaacaaattgttcgatcttgtactgaaattctttgaggataaacagcca
gtacacttcgaactcgctgctcaactgagcacgcgattcgtaaacgtcgaagaggaagaa
ttcaaaaatcgcctcaacatagtccttcccattgttagtggcaaaatattattactaggc
aacgatataaccgaaggtagattcgtcaaaatacaactggaacaatccgatgataaaaca
gacgaggaaaaacagaaagagaaagaccacagtctaatacaaatgttgaatttaatagaa
aaaatcactgttagttgtccgtctacattgaaaaataataagtttttaagcgattacgac
gatttagcgcagcaatgtcaagtgttattggcttatccccacgcgtgggtgagattgaaa
gcggcaaaaatacttggtgctgttttatcgacggtcgatcctgctgatttggatttggtt
gttagaaaaaaggtggatagtgaaagaggtttcttgtattacgatacggaggataagata
agaagtatagtgttggatttgtgtgcgcagtacacgcccgcgattacacaagaaatggct
gaacaggtcacgacagtattgttcttaattctgaaactggttcattcgatgtctagcttt
aaactgacagacaaagctcggatagaagaagatcaagcagaaactacggctaaagttaac
attcgttggattctgttcaaactgaggaaagcggtcaacgtagaagttgctaaggctccg
aattctatgaacattagatcgtcaatattcaccatgtggatgcatctaatcagctcattg
gagaccgaagttcttcacaaaattatagacgtgatcctaccgccgctagtgagagaacta
tctacaggggatcccctatcccctgcttctgtggccaaacaactagctagcagacttggc
aagaaattaaggaggaaaataggggatctggagtatagcaagatggtcgccgatgtacag
acgaggttgaatatcagaagggctgagaggaaaaagttactcctccaagaaaaggtgaat
aaccccgagaaggcggctaagcgtaaacttcagctgaaagaaaagaagaagcaatctaaa
aagatgaaattggaaatgttacacggcaagagaccgcggcccaagaagaggaaagctgag
gaaattgatattgaagatcagttattgaaagatgataattga

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