Amyelois transitella (navel orangeworm): 106142595
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Entry
106142595 CDS
T09957
Name
(RefSeq) uncharacterized protein LOC106142595
KO
K23112
BRCA1-associated ATM activator 1
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atra03400
]
106142595
DNA repair and recombination proteins [BR:
atra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
106142595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_2
Motif
Other DBs
NCBI-GeneID:
106142595
NCBI-ProteinID:
XP_013199864
LinkDB
All DBs
Position
12:complement(join(2035300..2036178,2036570..2036745,2037112..2037316,2037714..2039140,2045624..2045768))
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AA seq
943 aa
AA seq
DB search
MFKMEVQKYCQTLKKIKLLFEKLETPNYVMNNYYADAFINKLLDRSDPEIAQLATMPLMS
DLIADSLSRSENYHISVKVFLTRLLGLASRKELHFAKMFALIGDNVAKNFKEIHSPSMNA
SLRVAFLEVALSLVRHFSGMMWLIRTGVWKDILMLVNEKRTVFVVRQVYQFVAKFMWALN
DFGDVNNINIALTFILAPIQDIGLVNLNILSDENEIEICKKIEPMCHMLLAICSEKDRIR
TASKLMNCLISECFIITNIGMFFGRLRSEETILMCAKIIFWATLSSIFQLKPLEEGVTYT
QEDFLGLNAFYFNTLRFLIQRRNTKLVLEFCSACNMIWNMVWQNQKPFMNENDKKLEMQT
QILFICVVPLMIWITMGRTTTEIMEEEIIVMHMKNIVNNIYSEHTMRAAYGIRDLMTETD
VMSTVMQTVKMLTCLKTHLTDEQANIMFQSLFFVIKDYDPLKVTESDGEGYSECSEKIVV
MCHVMEIILSLVKNYNITWNESLEVLCLYGVVHGILKKPNLPPKFVVVSLNVLALSVKKF
LTPNLSLLLESTPGSAVYEIGSLINTKMNDLRWEVRDSALELLFVCTDLSYIKFPPFQKQ
IMEENLINVAAAIALNDYESYVQASALKCLGAASRVTSIWEQLKTEYPNIQEQILAILRT
NSEGIVRKEACNVLCEIYQHVKLSAIAKHTLYEYMVSSALSDFHWEVQISALKFWRIVIQ
TLLTEQGMLDGTFPPVTFSKESRKIVTLNAAEIQKRLLKVLDELSSIGCLTVLVKLLNND
SETEIMELALNISLELLDILNKHKLRECIKPNEGDPITADDLICSIKEDDDSNDMETLPS
YTERADNIIEGILKSDDINLLANIYDRHMSLQNSDSEQVKPKIRLLKSASPYLFVNHVTS
KDFKAILEQNKQWKEGIRSLSSLLDDILGIYEVNEDVNSLDCY
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaatggaagttcagaaatattgtcaaactcttaagaaaataaagttgttattt
gagaaacttgagactcccaattatgtgatgaacaactactatgccgacgcttttatcaac
aaacttttggatagatctgatccagaaatagctcagcttgcgaccatgccgcttatgtct
gacttgatagctgactcattaagtcggtctgaaaactaccacatttcagtgaaagtattc
ctaacaagacttcttggtctggcttcaaggaaagaacttcatttcgctaagatgttcgcg
ctaatcggagataacgtcgctaagaatttcaaagagattcactcgccaagcatgaacgca
agcctgagggtggcttttctggaagtggccctttccctcgtcagacatttttcaggcatg
atgtggttgataagaacaggagtgtggaaagacattttgatgttagtcaacgagaagaga
accgtgttcgtcgtccggcaagtctaccaattcgttgccaaattcatgtgggcattaaat
gattttggcgatgtcaacaacattaacatagctttaacctttatcctagcccccattcaa
gatatcggactcgtcaatctgaatatattaagcgatgagaatgaaattgaaatttgcaag
aagatcgaaccgatgtgccatatgctgctagctatttgcagtgagaaagatcgtatacgc
accgcaagcaaactcatgaattgtcttatatcagaatgcttcattatcaccaatatagga
atgtttttcggcagattgcgatccgaagagactatactcatgtgtgctaagataatattc
tgggcaacattgagcagtatatttcagttgaagccgctagaagaaggagttacgtatact
caagaggactttctcggtttgaacgctttttatttcaacacattgagatttttgatacag
aggcgcaacactaagttggttttagagttctgcagcgcatgcaacatgatatggaatatg
gtgtggcagaaccaaaagcccttcatgaatgagaatgacaaaaagttggagatgcaaact
cagatattgtttatatgtgtggtgccgctgatgatttggataactatgggtaggacgact
acagaaatcatggaggaggagattattgtaatgcatatgaagaatattgtgaataatatt
tatagcgagcatacgatgcgcgccgcgtacggtataagagatctcatgacggaaacggat
gtcatgtccacggtgatgcagactgtcaaaatgctgacgtgtttaaagacgcacctaaca
gatgaacaggctaacataatgtttcaatcgttgttctttgttataaaagactatgatccg
ctgaaagtgaccgagtcggatggtgaagggtattcggagtgttcggagaagattgtggtg
atgtgccacgtgatggagatcatactgtcgctggtgaagaactataacataacctggaat
gagagcttggaggtgctgtgcctgtatggcgtcgtacatggtattctcaaaaagccaaat
ttgccgccaaagttcgtggtggtatctctaaacgtacttgcgctatcggtaaagaagttc
ctaactcccaatctctccctgctgctggaatctacaccaggctcggctgtgtacgagatt
ggatcccttatcaacactaagatgaatgatttacgctgggaagtgagggattcggcgcta
gagttgttatttgtttgcacggacctgtcttatataaaattcccgccgttccagaaacaa
atcatggaggagaacctcatcaatgtggccgcggctatcgccctgaacgattacgagtca
tacgtgcaggcttcagccctgaagtgtttgggtgcagccagcagggtcaccagcatctgg
gaacagttgaagacggagtaccccaacatacaggaacaaatactagctatcctaagaact
aactccgagggcattgtaagaaaggaggcctgtaatgtcctgtgtgagatctaccagcat
gtaaaactgtctgccattgcgaaacatacactatacgagtacatggtgtcatcagcatta
agcgatttccactgggaagtccaaatcagcgcgttgaagttctggagaatcgtcatacaa
accctactcacagaacaaggcatgttagacgggaccttcccacccgttaccttctcaaag
gaatcccgcaaaattgtcacattaaatgcagctgaaatccaaaaaagactactaaaagtc
ttagacgaactatcctcaatcggttgcctcaccgtcttggtaaaattgttgaacaatgac
agcgagactgaaatcatggagctggctctgaacatatcgctggaacttttggatatattg
aacaaacacaagttacgtgaatgtataaaaccaaatgaaggggatccgatcacagccgat
gatctaatttgctctatcaaagaggacgatgattctaatgacatggaaaccttaccatct
tacacggaaagagctgataatatcattgagggcatattaaagtcggatgatataaactta
ctggcgaacatatatgatcgtcacatgagcttacagaattcagattctgagcaagttaaa
cctaaaataagactgctgaagtcagcgtctccatatttgttcgtgaaccacgtgaccagt
aaagattttaaagctattctggagcagaataagcagtggaaggaaggtatacgcagttta
tcatcgctcttagatgacatactcggtatctacgaggtgaatgaagacgtgaattcttta
gattgttattga
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