KEGG   Amyelois transitella (navel orangeworm): 106142624
Entry
106142624         CDS       T09957                                 
Name
(RefSeq) nuclear pore complex protein Nup214 isoform X1
  KO
K14317  nuclear pore complex protein Nup214
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    106142624
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atra03019]
    106142624
Messenger RNA biogenesis [BR:atra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     106142624
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40 ANAPC4_WD40 Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 106142624
NCBI-ProteinID: XP_013199908
LinkDB
Position
12:complement(join(6326916..6326946,6327466..6327589,6327818..6327981,6328077..6328137,6329074..6329229,6329592..6329782,6330308..6331424,6331512..6331628,6332009..6332509,6332587..6332964,6333248..6333418,6333992..6334275,6334864..6335046,6335660..6335824,6336291..6336460,6336866..6337072,6337781..6337857,6338217..6338457,6338846..6339060,6339505..6339607,6339822..6339909,6340308..6340428,6340980..6341191,6341322..6341494,6341839..6342005,6342093..6342231,6342404..6342442))
AA seq 1864 aa
MEVQFGPNAQDEPNLLYKLQRKIKVFDTKDALPSRGYNLVASSSKFGIAFVASPDATLSV
FYLNQLIDKECDPQYLSVRLPEKTSHIAVSCHQELLAVTGGQLLCIYNIADFQNPNVSPA
LSMKTEVNPTTFVSSLQWNPCIPDNIAIAFYDGTLLASQVTSGQINKVQSKARCICWSPK
GKQLVTGNSDGTLCQYKPNLTPAKLIPAPNLFEGAPVEVLAVYWISTFQFAAVYKNATDN
SRPSVTIVNTPKAGQPSCLNYEDICYSTGSNRPWYYYLQGIPQWNLILSSSSNSMEIATL
GSADGSSWLQWCQTDEARPELPLTDKKIENYPVGLCIDTSAIHQLPWGENEVLPHMPLLL
VVSQTGLLTIFNVINMNKQAPPLCSPPQQLQLPAAAMATLVPAAPAPTTAPPPQEVQAKP
AQQPQTFAPQPVAPQPIAPLPVAPQQVAPQQATPQQVASQFTPQPQISVLSVATSAFGAP
PTNNAPKMFQPQLPQGISFGQSTQAAQKAVEVKPTIAPASQPQAQVQPKPTPVPAKPQPT
PAQEAAAAAMKAEQEKVNKQKANQELKDMLIKEVNDFQMELYKFMVKTRETQAKLQQDIE
AINTNFNLQSKDAEQLKKECSLDELRNNIFQLKLELVKACAVVAEARTHAEAKDIHQWTQ
VDPLTNKRISSVKKLAYYVQNQVEQAQKALDYKWNIIASNEMNMHKPGHRMIRPILDDVY
QPLVKQQEILCRQQAVLRTLRNTLKECEMTPMFKSASLLRSTPFKNKDPLSKLTKNILNM
SIEPQNKTKEPLLNAQKLDALKDMLSNHKTIKIKPVSVEMRQRLAAMKINYEKNLREKAA
QPIVQETKVLPKVEPPSPVSIASAAPRLVKFEPKQEIKFEPKQEIKPSPISIPSFSAISN
LKPVAPSLSNVARTLFTDEPNYASTKPQLQQPIPISQVQPQTSQVQPQPTLKPKQSTFTF
AAPTSNATNTRSVLKELLQNKQALANAQNEANVAEQKNETHSTAQTSDTNTFTLKKSDSG
SFLEQKNDANIFMGQKICSPSAFGASSTPLTSGPSGSNLFTAKPISDITNMFSKFQPQAF
VPESKPQEQAKPKSSETGEPETPELPKTETKKVEKPMTNLFGMKTSTPLSAQNVPDVLKI
DKPVVKLVEKIEKAKENIPEKSAENATQSTSVPKTEDKIDVIPFGIQSTNKTSLFGTPQT
AVTSASETPVTTEHQKETEIKTDSKPEVEKSDATTTSSSLFAAANAATPTEIKSPPTFTS
TATATTESPTTAVSTLTETTKTSIFGTPPTTASSLFGSAVAASSFPTKTTQSGSIFSTNT
TNANVFASSPSSIFSTPTSATPTSGETTTQSSSIFGTTTPTSSNGESKPSVFSSPTPAAP
SFGTKTTQSSSVFESSPAFATTNNSAFSSTTVFGTTTTTSSIFGGTSPSSVFRTATATTT
AQSLFGSPPSTTSQSVFTSTTSQSLFGGTPTTTQSLFGSTPATTASAFGSTTPTPGAFGV
TTTQSLFATTSPNVFGTATTTQGSLFGAPTTTQSMFGAPSTQSSVFGTSNQSVFENSQAT
QSSIFGSPTQTTQSSLFGGTAVTTTAQSGSLFGGGEANLFAAASISTTSAPSQTSGGNIF
GGGSGGSVFGGGNTSNVFGGKAAFGQSNTSAGSIFGGSASFGQKPAAANNFWSGGNTSGG
GFGSGFGQQATTQASSIFGGTGGSFSQPSTGQPFGSPQQNAGFGENKPSIFGSPQQQTAP
AFGGSAVFGSKPAFGQSAAFSSPTSGGFGSFSGLNKSPTSGFGAPATFGGSAFGGGATFG
GTSPSKMFGGSPAGFGSPTQSNATFESLATQNTLTFGNLAQQSGPPPQQQPTFNTSPSFT
GWRG
NT seq 5595 nt   +upstreamnt  +downstreamnt
atggaagtacaattcggtccaaacgcgcaagacgaaccgaacttactatacaaactacag
cgaaaaattaaagtgtttgataccaaagatgcactgccaagccgtggttacaatcttgtg
gctagttcaagcaaatttggcatagcatttgtagcctcaccagatgcaactctatcagta
ttctatttaaaccagctcattgataaggaatgtgacccccaatacctatcagtgagactg
cctgagaaaacatcacacattgcagtcagttgtcaccaagaacttttagctgtaactggt
ggacagttgctttgcatttacaatattgctgactttcaaaatccgaatgtatcaccagca
ctgtcaatgaagactgaagtgaatcctactacctttgtatcatccttgcaatggaaccca
tgcattcctgataatatagccatagccttctatgatgggactcttcttgctagccaggtc
acttcaggacagattaacaaagtgcaatctaaagcaagatgtatatgttggagccccaaa
ggcaagcaattggtgaccggcaacagtgatggcaccctctgccaatacaagcccaacttg
actccggctaaactgataccggcaccaaatttatttgaaggagcaccagtggaagtgctt
gctgtatactggatatctacatttcagtttgctgcagtctataaaaatgctactgataat
agcaggccatctgtcactatcgtgaacacaccgaaggcaggacagccatcttgcttgaac
tatgaagatatttgttacagtactggctccaataggccttggtactattatcttcaagga
ataccacaatggaatttaatactatcttcgtcatcgaacagtatggagattgccacattg
ggatcagcagatggctcgtcttggttgcaatggtgtcagactgacgaagctagacccgaa
ctacctttgacagataagaagatagaaaattatcctgttggtttatgcatcgacacaagt
gccattcatcagctaccctggggagaaaacgaggtgctaccgcacatgcctcttctccta
gtggtatctcaaaccggtcttcttacgatattcaacgtgattaatatgaacaaacaagcg
cctccgttgtgttcgccgccgcaacaattgcagttgccggctgcggcgatggccacttta
gttcccgctgcgcctgcgccgactacggccccaccgcctcaagaagttcaagctaagcca
gctcaacaaccacaaacgtttgcgccacaacctgtcgcaccacaacctatcgcgccacta
cccgttgctccacaacaagttgccccacaacaagctaccccacaacaagttgcatcacaa
ttcacgccgcaaccgcaaatttcagtactatcggtagcaaccagtgcgtttggagcgcca
cctactaataatgcgccaaagatgtttcaaccgcagttaccgcaaggaatttcttttggg
caatcgacacaagcagcacaaaaagcagtagaagttaaaccaacaatagcccccgcatcg
caaccgcaagcacaggtacaacccaagccgaccccagtaccggccaaacctcagcccacg
cccgctcaagaggcagccgccgcggccatgaaggctgaacaagagaaagttaataagcag
aaggcgaatcaggaactgaaagatatgctcataaaggaggtcaatgacttccaaatggag
ctgtacaagtttatggtgaaaactagggagacgcaagcgaagctacaacaagatatagaa
gcgatcaataccaacttcaatctacaatcgaaggacgcggaacaactgaagaaggaatgc
tcattggacgagcttcgcaacaatattttccagctgaaattagagttagtgaaggcatgt
gccgtagttgcagaggcaagaacccatgctgaagcgaaagatatacatcagtggactcaa
gtagaccctctgactaacaagcgaatttcgtcagtcaaaaagttggcgtactacgtgcaa
aaccaggttgaacaagcgcaaaaggcattggattacaagtggaatattattgcctctaat
gaaatgaatatgcacaaaccaggccaccgcatgattcggcccatactcgacgacgtttac
caaccgctcgtcaaacaacaagagatactgtgcagacaacaggccgtgttgagaactctg
agaaacactctaaaggagtgcgaaatgacgcctatgttcaagtctgcgtcgctgttgaga
agtactccatttaagaacaaagatcctctatcaaaactaacaaagaacatactgaacatg
agtatcgaaccgcaaaacaagacaaaggagccattgctaaacgctcaaaaactggacgct
ttaaaagacatgttatcgaaccataagacgataaaaataaaacctgttagcgtagaaatg
aggcagcgactggccgctatgaagataaattatgaaaagaatttgagagaaaaagctgct
cagcctatcgttcaggaaacaaaagttttacctaaggtggagccaccgtcgcctgtgtct
attgcatcagcagcaccaaggctcgtgaagttcgaaccaaaacaagagataaagttcgag
ccgaaacaggaaataaagccgtcgcccatttcaataccatcgttctccgccatcagcaat
ttaaaaccggtagcaccgtcgttgtctaatgttgcaagaaccttatttacggatgaaccc
aactacgcatcaacgaagcctcaattgcaacaaccgatcccaatcagccaagtgcaaccg
caaaccagtcaagtgcaaccccaacctactttaaaaccgaaacaatctacctttacattt
gctgcgcctacgtctaatgcaacaaacacgaggagcgttctcaaagaattgttacaaaat
aaacaggctttggcgaacgctcaaaatgaagcgaatgttgcggaacagaaaaatgaaaca
cattctacagcacaaacaagtgatactaacactttcacattgaaaaaaagtgattcaggt
agctttttagaacagaagaatgacgcaaacatatttatggggcagaaaatatgttcgccc
tcggcatttggagcgtcatccacacctctcacctcagggccatctgggtctaatttattt
acagcaaaaccaatatcagacataaccaacatgtttagtaagttccaaccacaagcattt
gtacctgaatcgaaacctcaagaacaagcgaagccgaaatcatctgaaacgggagaacca
gagactccagaattaccaaaaacagaaacaaagaaagtagaaaagcctatgactaattta
tttggtatgaaaacttctacgcctttatccgctcaaaatgtacctgatgttctaaaaata
gacaagccagttgtaaaacttgtagaaaaaattgaaaaggcaaaagaaaacattccggag
aaatctgcggagaatgcaacacaaagtacatcagtgccgaaaacagaggacaagattgat
gtgataccatttggaatacagtcaaccaataaaacttctttatttggaactccacagaca
gcagtgacaagtgcaagcgagactccagttacaacggaacatcaaaaagaaactgaaata
aaaactgatagtaaaccggaagtggaaaaatctgatgcaacaacaaccagttcatcactt
tttgctgcagcaaacgcagctacaccgactgaaattaaatccccgccaacattcacatcc
actgcaactgcgacaactgaatcgcctacaacagcagtctctactctaactgaaaccaca
aaaacatctatatttggaactcctccaaccactgcatcgtcattatttggctcggccgtc
gctgcctcttcttttcctactaaaacaacccaatctggatcaatatttagtacaaatact
accaatgccaatgtttttgcttcatcgccatcatctattttcagtacccccacttctgcc
acacctacttcaggagaaacgacgactcaatcttcgtcaattttcggtacaacaactcca
acatcaagtaatggtgaatctaaaccatcagttttcagttcccctactcctgctgcacca
tcttttggtacaaagacaactcagtcttcgtcagtttttgagtcatctcctgcattcgct
actacaaataattcggcatttagttcaacaacggtttttggaaccactaccactacctct
tctatatttggcggcacttcgccatctagtgtgtttaggacagcaaccgcaactactacg
gcacaatctttatttggtagcccaccatcaactaccagtcaatctgtctttacttctaca
acttcccagtctttattcggtggaacgccaacgactacgcaatctctatttggctctaca
cccgcaacaactgcatcagcatttggcagtacaacgcctacgccaggtgctttcggggtt
actacaactcaatcgttgtttgcaacgacatcaccaaatgtatttggaacagcaactact
acccaaggttccttatttggtgctcctactaccactcaatcgatgtttggtgcaccttca
actcaatcttctgtatttggaactagtaaccagtctgtatttgagaactctcaggctacg
caatcttcaatatttgggagtccaacacaaactactcaatcttcgctctttggcggtaca
gccgtgacgacgacggcgcaaagtgggtcattatttggaggaggtgaagccaatttgttt
gccgctgcgagtatatctacaactagcgctccgtcgcagactagtggtggaaatatcttt
ggtggtgggtcaggcggttccgtgttcggcggaggtaacacgagcaacgtgttcggtggt
aaggccgcctttggccaatcgaacacgtctgccggatccatctttggaggcagcgcctct
ttcggacagaaacccgccgccgctaacaacttctggtcgggtgggaataccagcggagga
ggatttggatctggttttggtcaacaagcaacaacccaagcttcgtcaatcttcggaggc
acaggtggcagtttcagtcagcccagtactggccaacctttcggtagtccccaacaaaac
gccggcttcggcgagaacaaaccttcgatctttgggtcccctcagcagcaaactgcacca
gccttcggagggtctgcagtattcggatcaaagcctgcatttggccaatcagcagctttc
agctccccaactagcggcggtttcggttcgttcagcgggctgaacaagagccctacgagt
ggtttcggcgcgcccgccaccttcggggggtcggccttcggcggtggagcgaccttcggg
ggaacctcgcctagcaagatgtttggcggctcgccggctggtttcggatcaccgacccag
tctaacgctacgttcgagagcttagcgacacaaaatacgctgactttcggcaacttagcc
cagcagtcggggccgccgccgcaacagcaacccacttttaacacatctccatcattcact
ggttggcgcggctga

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