Amyelois transitella (navel orangeworm): 106142677
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Entry
106142677 CDS
T09957
Name
(RefSeq) nibrin
KO
K10867
nibrin
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106142677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atra03032
]
106142677
03400 DNA repair and recombination proteins [BR:
atra03400
]
106142677
DNA replication proteins [BR:
atra03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
106142677
DNA repair and recombination proteins [BR:
atra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
106142677
BRCA1-C complex
106142677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIBRIN_BRCT_II
FHA
Yop-YscD_cpl
RTT107_BRCT_5
BRCT
Motif
Other DBs
NCBI-GeneID:
106142677
NCBI-ProteinID:
XP_013199990
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All DBs
Position
12:5275554..5277470
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AA seq
638 aa
AA seq
DB search
MWYLTSDNDSRVIYVLPFKQIIIGRSVDGQMCNFAIPDDASISRKHATLDNGGNHLILHD
LGSRYGTFVNNSTSKIDSNVPIQLKAKDVIKLGKLNSLWTVKSANLVTCTSTLKGESLQN
LKSCLNKIGGILKNEWDDFCYYLTMPAITLTIKVVLALVQGSHIVTTEFWSHCIAAVDAN
QPLPDPKNYTPNIVESTLNKEIVSFNPDIRRRSLFSNKKIVFFSKKQFEMYKSVLTKSCG
TPMLLSECKMTKSMLCEQDVIVIQYNITNTESQIVANQVNEIVNYLKNNNKRVIADAEIG
LAVLFCNTEKYCNPNFNFTSEVMKQTPKQEKMPTNVLVQESQETHCVSKKENVVINESLT
SENVDENNTSNNLFKRKHSNDVTENAHKKFASEQGSLLNNKNNKRKNEDINDEQPNKKMT
GASQIDDEIFNFISPSTNKTVNRDNGVGKKLNLMKPQKRKQDAEPGEDDEDNIFNFVHDK
TKSNEDSTNNIFNMKKKSRMEINDEIAEEESIVIKKEVEEKIDISALRGRRLEELMKLNL
ELNGNPVHKIKKEQDDDLDSRMNKLDLGTTIVIINNDLIVKKEPLLIESERNTAGKNFKK
FKKVWPLKMQVSVISTSKSDDHINQQISGRDESCSQVY
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgtggtatttaacatctgataatgattcaagggttatatatgtattgccttttaaacaa
ataattataggtagaagtgtggatggtcagatgtgcaattttgcgattcctgatgatgca
tcgattagtagaaagcatgctacactagataatggaggaaatcatctgatacttcacgat
ttgggatcaagatatggtacgtttgtcaataattctaccagtaaaatagacagtaacgtg
cccatacaactgaaagcgaaagacgttatcaaacttggaaaattaaacagcttatggact
gttaaatcagcaaatctcgttacttgcacgtctacattaaaaggagaaagtctacaaaac
ctaaagtcatgcttgaataagattggtggaatattaaaaaatgaatgggatgatttttgt
tattatctcaccatgccagctataaccttgactatcaaagttgttttggcgcttgtacag
ggatcgcacatagtcacgacagaattttggagccattgcatagcagctgtagatgcaaat
caacctttaccagatcctaaaaactacacccccaatattgttgaatctactctcaataaa
gaaatagtgtcatttaatcctgatatacgaagacgatctttatttagcaataaaaaaata
gttttcttttcaaaaaagcaatttgaaatgtataaatcagtgcttactaaaagctgtggt
actcctatgctattgagtgaatgtaaaatgactaagtccatgttatgtgagcaggatgtg
attgtaattcagtataacatcactaatactgaatcacaaatagtggcaaaccaagttaat
gaaattgttaattatttgaagaataataacaagagagtgattgctgatgcagaaataggc
ctggctgttttgttttgcaacactgaaaaatactgtaatcctaattttaattttacctct
gaagttatgaaacaaactcccaaacaagaaaaaatgccgacaaatgttttggtccaagag
tcacaagaaactcactgtgtgtctaaaaaagaaaatgttgtcataaatgaaagccttaca
tcagaaaatgtagatgaaaacaatacatctaacaatttattcaaaagaaagcacagtaat
gatgttaccgaaaatgctcataagaaatttgcttcagagcaaggatcactgcttaacaat
aagaataataaaaggaaaaatgaagatattaatgatgagcaaccaaacaagaagatgaca
ggggcttcccaaattgatgatgaaatctttaattttattagcccctctacaaataagact
gtcaatcgagataatggagtaggaaagaaattaaatctaatgaagccacagaaaagaaag
caagatgccgaacctggtgaagatgatgaagacaatatatttaattttgttcatgataaa
acaaaatccaatgaagattcaactaacaatatctttaacatgaaaaaaaaatctcgtatg
gagatcaatgatgaaattgctgaggaagaatccatagtaattaaaaaagaagttgaggaa
aagattgatatttctgcattaagaggccgtaggttggaagaattaatgaagttgaatttg
gaattaaatggcaatcctgttcacaaaataaaaaaagagcaagatgatgatttggacagt
agaatgaataagttggatttgggcactacaatagtaatcattaataatgacttgattgtt
aaaaaggagcccttgttgattgaatctgaaagaaatactgcaggaaagaattttaagaaa
tttaagaaagtatggcctttgaaaatgcaagtgtctgttatttcaacatctaaatcagat
gatcacataaatcaacaaatctctggaagagatgaatcatgttctcaggtgtactga
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