KEGG   Amyelois transitella (navel orangeworm): 106142727
Entry
106142727         CDS       T09957                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 35
  KO
K18468  vacuolar protein sorting-associated protein 35
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:atra00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    106142727
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:atra04131]
    106142727
Membrane trafficking [BR:atra04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Retromer subcomplex
    106142727
SSDB
Motif
Pfam: Vps35 SOR
Other DBs
NCBI-GeneID: 106142727
NCBI-ProteinID: XP_060807154
LinkDB
Position
24:join(6019749..6019823,6020437..6020557,6021428..6021621,6022659..6022787,6023478..6023563,6024025..6024217,6025704..6025832,6027500..6027604,6029159..6029307,6030036..6030255,6031316..6031425,6032298..6032466,6034494..6034591,6035039..6035217,6036372..6036505,6037153..6037326,6042759..6042917)
AA seq 807 aa
MTNQASPVEEQEKLLEEALNVVKVQAFQMKRCLDKSKLMDALKHASTMLGELRTSLLSPK
SYYELYMAITDELRHLELYLLEEFQKGRKVADLYELVQYAGNIVPRLYLLITVGLVYIKT
STNLRRDLLKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDTAEAENENEGTVRDAIDF
VLMNFAEMNKLWVRMQHQGHSRDKERRERERSELRILVGTNLVRLSQLESVTVEHYRKLV
LPGILEQVVSCRDAIAQEYLMECIIQVFPDEFHLANLQPFLKSCAELQPGVNIKNIIIAL
IERLAAYSQRNEGTINLNVVTEDGQEQEVQLFEVFSDQVAAITQSRADMPQEDMLSLQLA
LLRLSQRVHPGQLGYVDRVLAHTHNICQDIHNTSGKTHLEHNTPVFKELMKILKLPADHY
KNMLTLIQLEHYTPLICHLSHGGRVTLAVHLCGRVLDQADFISTPQHVEAVLGMLDVLVK
DQPDQPPADEDPEDFMEEQGLLARLIHHFKSDNPDQQYLILSTARKILSAGGARRIQHTF
PPILFHAYQLAFLYKDLKDQDDMWEKKCQKIFQFCYQMIGTLVKAELAELPLRLYLQGAL
AISEIGFANHETMSYEFLSQAFSLYEDEISDSKAQLAAITLIIATFEQINCFGAENAEPM
RTQCALAASKLLKKPDQSRAVALCAHLFWKGVKDGNQWPLNDANRALDCLKKAARVAQQC
MDGGVQAQLLAELLGRYALLRERGNASLTVNLIETVIQKIREELANLDQSEEVEQITKHF
HNTLQHLKNRMENPDPDGLGYEGLQLS
NT seq 2424 nt   +upstreamnt  +downstreamnt
atgacaaaccaggcatctcctgtggaggagcaggagaagcttctggaagaagctttgaat
gttgttaaggtccaggcgttccaaatgaagagatgtctggacaagtccaagctgatggac
gcgttgaagcacgcttcaacaatgctcggagaactcaggacttctctgctctctccgaaa
agctactacgaactttacatggcaataacagatgagctgagacacctggagctgtacctc
ctggaggagttccagaagggtcggaaggtggctgatctgtacgagttggtgcagtacgct
ggaaacatagtgccgaggctgtacctgctcatcaccgtgggccttgtctacatcaagacc
agcaccaatctccggagagatctgcttaaggacctggtggagatgtgccgcggggttcag
cacccgctgcgggggctgttcctcaggaactacctgctgcagtgcaccaggaacatcctg
cccgacaccgccgaggcggagaacgagaatgaggggacggtgcgcgacgccatcgatttc
gtcctcatgaatttcgctgagatgaacaagctctgggtgaggatgcagcatcagggtcac
tccagggacaaagagcgtcgcgaacgcgaacgttccgaactacgcatcctggttggcacc
aacttggtacgcctttcccagctggagagcgtgacggtggagcattacaggaagctggtg
ctgccggggatcctggagcaggtggtcagctgcagggacgccatcgcccaggagtatctc
atggagtgcatcattcaggtgttcccagacgagtttcacttggccaacttgcagccgttc
ttgaagtcctgcgctgaactacagcccggggtcaacattaagaatattatcattgcactg
atcgagagacttgctgcttatagccagaggaacgaaggtacaatcaacttgaacgtagtg
acggaggacggccaagaacaggaggttcaattgttcgaggtcttctcggaccaagtagcc
gctattactcagagccgcgcggacatgccccaggaggacatgctgagcctgcagctggcg
ctgctgcggctgtcgcagcgcgtgcaccccggccagctgggctacgtggaccgcgtgctt
gcgcacacgcacaacatctgccaggacatacacaacaccagcggcaaaacccacttggaa
cacaacacgcccgtcttcaaagagctgatgaagatattgaagttgccagccgaccactac
aagaacatgctgactctaatacaactggagcattacacccccctcatctgtcacctgagt
cacggcggccgcgtgacgctcgccgtgcatctctgcggccgcgtgttagaccaggccgac
ttcatatctacaccgcaacacgtggaagcggtcctgggcatgctggacgtgctggtgaag
gaccagcccgaccagcctccagctgatgaggacccggaagacttcatggaggagcagggc
ttgctggctagattgatacaccatttcaaatcggacaatcctgaccaacagtatctcata
ctaagtacagcacggaaaatattgtccgctggaggggcgaggcggattcagcacactttc
ccgccaatattgttccacgcgtaccaattggcctttttgtataaggacctcaaagatcag
gacgacatgtgggagaagaaatgccagaagatattccaattctgctatcaaatgattgga
actctcgtcaaagcagagctcgccgaattgccgctaagattatacctccaaggagcccta
gcgataagcgagataggtttcgccaatcacgagacgatgtcgtacgagttcctgtcgcag
gcgttctccctgtacgaggacgagatatccgacagcaaggcgcagttggcggccatcacg
ctcatcatcgccacattcgagcagatcaactgttttggtgctgagaacgctgagccgatg
cgcactcaatgcgccctagcagccagcaagctgctgaagaaacccgaccagagccgggcg
gtggcgttgtgcgcacaccttttctggaagggggttaaagatggcaatcagtggcctcta
aacgacgcgaacagggctctggactgcctgaagaaggccgcgcgcgtcgcccagcaatgc
atggacggcggtgtgcaagcgcagctcctggccgagctgctgggcagatacgctctgctc
agggagagggggaacgcgagtctcactgtcaaccttatagagacggtgatccaaaagata
cgcgaggagctagcgaacctcgaccaatcggaagaagtggagcaaataacgaagcatttc
cacaacacgcttcaacacctcaaaaacagaatggagaaccccgacccagacggtttgggg
tacgagggactgcagttgtcttga

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