| Entry |
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| Name |
(RefSeq) ubiquitin carboxyl-terminal hydrolase 1 isoform X1
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| KO |
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| Organism |
atra Amyelois transitella (navel orangeworm)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:atra00001]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
106142790
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:atra01002]
106142790
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:atra04121]
106142790
03400 DNA repair and recombination proteins [BR:atra03400]
106142790
Enzymes [BR:atra01000]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106142790
Peptidases and inhibitors [BR:atra01002]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106142790
Ubiquitin system [BR:atra04121]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106142790
DNA repair and recombination proteins [BR:atra03400]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
106142790
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
9:join(9548554..9548557,9548788..9549057,9550064..9550244,9550672..9550879,9551992..9552142,9552645..9552750,9553184..9553392,9553932..9554095,9554453..9554655,9559349..9559527,9559745..9559929)
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| AA seq |
619 aa
MGILKMPVNSVPETKKGIEKPRSLSLNRNNAILSNRKRKVEDLNKISSPLKLSINCNKEN
KPLKRPMNGTYNNTLSAAKKLKPLTLATTLSEKIIDPELIIAELKPASSAMLNGHHPPDS
QYAGSIQRKTPIATLSNLGNTCFLNSVLYTLRYAPRFLHNLHHLVSDLASVEQKLGSIRQ
KSSSLGRSAAGLASSGARSWSSKDLLSLGQSDNSSGKSKIQIATEKLHETYFNLRAGESK
CLNSGSADSSPEPFAADAFLAALRDVNSTFEGNRQQDAHELLVCVLDTVRETCRALAARA
ARLEPDSNGIGRQPSLDGDGGKPTLGNLRKSWKKRKELKASDKNHSPTEERAPSPSELHR
DERTRPGWDFVADDFEGTMVVRTMCLECETVTEKAEALCELCVPVGDEDATDDEPFKAAC
LSSEYLRDQNKYWCERCLRYNEARRSVAYSRLPRLLVLQLKRFSGGMEKITRHVPTPLLM
PCFCEACAKRPPDHAPTHRYILWAVIMHLGQTLTGGHYVAYARDGPPPAACARQPGAAPA
PPAGFMRALFSRPPRAPAGCAAKECCVPRARAEAGWLACDDELVKPISNEEFEDLLSSEP
KMRSAATPYLLFYVKSEIG |
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| NT seq |
1860 nt +upstreamnt +downstreamnt
atgggtattctgaagatgccagttaattctgtaccggaaacaaagaagggtattgaaaaa
cctagatctctgtcattaaacaggaataatgctatactgagtaacagaaaacgaaaagtt
gaagacctgaataaaatttcatcgcctttaaagctctctattaactgtaataaggaaaat
aagccactcaaaagacctatgaacggcacctataataatactttgagtgcagccaagaaa
ctcaaacctctcaccttagcgaccacattatcagaaaaaattatcgatccagagttaata
atagctgagctgaaaccagccagctctgccatgttgaatggccaccacccaccggacagc
cagtatgcagggagcatccaaagaaagacccctattgcgacactctccaatcttggaaac
acatgttttcttaatagtgtgctttatactttaagatacgctccccgcttcctccacaac
cttcatcacttggtatcagacctggccagcgttgaacagaagctgggcagcatccggcag
aagagctcctccctcggcaggagcgccgcggggctggcgtcctccggcgctaggtcgtgg
agcagcaaggacctgttgtctttgggccagtctgataatagttcggggaaaagcaaaata
cagatagcaacggagaaactccacgaaacttacttcaaccttcgggcgggggagagcaaa
tgtctcaatagtggctcagcggactccagtcctgaaccatttgcggcggacgcttttcta
gcggcgctaagggatgttaactccacttttgaaggcaaccggcaacaggacgcgcacgag
ctgctggtgtgcgtgctggacaccgtgcgcgagacgtgccgcgcgctcgccgcacgcgca
gcgcggctcgagcctgacagcaacggcatcggccgtcagccaagcttggacggcgacggt
ggtaaacccacgctggggaaccttcgcaagtcgtggaagaaacgcaaggaactcaaagct
agtgacaagaatcactcgcccactgaagaaagggcgccatcgccctcggagttacataga
gatgagaggactaggcctgggtgggacttcgtcgctgatgactttgaaggcacaatggtg
gtccgaacgatgtgcctcgaatgtgagacggtgactgaaaaagctgaagctctatgcgag
ctgtgtgttccggtgggagatgaagatgccacggacgatgagccgttcaaggcggcgtgc
ctttctagcgagtacttgcgggaccagaacaagtactggtgcgagcgctgcctccgctac
aacgaggcgcggcgcagcgtggcgtactcgcgcctgccgcggctgctggtgctgcagctg
aagcgcttcagcggcggcatggagaagatcacgcggcacgtgcccacgccgctgctcatg
ccgtgcttctgcgaggcctgcgccaagcggccgcccgaccatgcgcccacgcataggtac
atcctgtgggcggtgatcatgcacctcgggcagacgctgacgggcgggcactacgtggcg
tacgcgcgcgacggcccgccgcccgccgcctgcgcgcgccagcccggcgccgcgcccgcg
ccgcccgccggcttcatgcgcgcgctgttcagcaggccgccgcgcgcgcccgccggttgc
gccgccaaagaatgctgcgtgccgcgcgcgcgcgccgaggcgggctggctggcgtgcgac
gacgagctcgtgaagccgatctccaacgaggagttcgaggacctgctgtcctcagaaccc
aagatgaggtccgccgccacgccctacctactcttctacgtcaaaagcgaaattggctag |
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