KEGG   Amyelois transitella (navel orangeworm): 106142801
Entry
106142801         CDS       T09957                                 
Name
(RefSeq) tubby-related protein 4
  KO
K24720  tubby-related protein 4
Organism
atra  Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:atra00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:atra04990]
    106142801
Domain-containing proteins not elsewhere classified [BR:atra04990]
 Other domain-containing proteins
  Tubby family proteins
   106142801
SSDB
Motif
Pfam: Beta-prop_WDR35_TULP_N Tub Beta-prop_WDR19_1st WD40_CDC20-Fz ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_EML_2 WD40_WDHD1_1st WD40_Prp19 Beta-prop_ELP1_1st TFIIIC_delta Beta-prop_CAF1B_HIR1 Beta-prop_HPS5 DUF3527 Beta-prop_EML
Other DBs
NCBI-GeneID: 106142801
NCBI-ProteinID: XP_060801858
LinkDB
Position
9:complement(join(8863802..8863918,8864173..8864349,8864574..8864724,8865037..8865214,8866391..8868068,8868362..8868483,8869272..8869432,8869723..8869943,8870645..8870869,8871344..8871444,8873670..8873931,8875056..8875229,8880767..8880949,8893053..8893217,8902560..8902655))
AA seq 1336 aa
MHLHFERNVNAKCDCTILSLSWMGKVPDELPEEEGWKLNRNNYYQEGWLATGNVRGVVGV
TFTSSHARRPHELPLRTNYNLRGHRSDVILVKWNEPYQKLASCDSSGVIFVWIKYEGRWS
IELINDRSTPVTHFSWSHDGRMALICYQDGFVLVGSVAGQRYWSSMLSLDARITCGCWTP
DDNQVYLGTASAQLVVMDVHGAMVSQVQLVAEGGITSMAWSCEKFKMEEGEESTESNGGH
VLAVALGNGEIVLLRGHDDVSPARISTGLRGNTLAMEWANSRELLAVAGTLLPETDEPPD
SPPFKNVVKFYSDTGALIYTVPIPYTQARVTALTWGHAARRLFVSVGGAVCTARVWRVVA
PLQLLARVRAAQALREPRLARLLPLPPRLQPALANLFAHTIRCNVPEISELRVFVSRPPG
AGARLHCTMLRHDDEEAGAYTLYLEHLGGLVPLLKGRRTSKIRPEFVIFDPQAEGAVTNP
VRCSSNSSSSSGTGSSSSGGSVAGVSSPRVTRRPPPQGQTSSSDTEPEEGCSGSPRLQRR
RRARSRRKMRHASDKDDAPDELAYIDSLPEDVRLVEVTSNIWGTKFKMHGLAKNVPANLG
QVTYKTSLLHLQPRQMTLMITELRDDYPVGPDPNFNPNIFSEDEEEVFQSMDTINSPSHT
NNNIRRKLTLSERINNTNNIMNQTDVYSTNNNNSSGPSLARAESYDEFPYIDTNDLSSVP
EPVYTVRRGHAAAGAGGRHAISPLRCEGSVPTLQSPKNAVAPTDIIFERPSPQAVTCGGR
GDFCGRADYAVRDNVSLKTNLSNIEQQSFSLNLTLEPSRQVTIKKCDSHVADNCLSKLRK
NICSRGEASYDMNTRILKSLCNKNYEHEVHPDAMTRRVETLKNLQKGEDLKYIDEETPVE
TNISNIVERGREVRVQRTTTVVPISPVCASVPVYDTMTRSCSVGYLDLVDPQVLHAHVSL
TALRGEPPRRLILVNNKRQRRPRRHQRNADAKQAENAKTPSLKKCGKSKSLDSSELSVAA
DKNVRNLKSEPSKADVVSGNSSGRCTSTGTEDTSTTSAEEGGRRSRRDYPVCTVCRLVAP
YDRRPPAPPPYVCAACGPASRPAPPRDPPAPAPVSRPPADSDSDYSKYYSSLEQLALRLL
ASRSGRGSRSAQAREVSSAPASPRPARAAPPPAPATPRRTRYSSASPIRQLLNSPLLNRR
RNKKPSESSDDEYSNGYNEVNSKNYRDLESFQKAQLRNKLKRCGTVGGPCPASSRRQLVM
HNKAPMWNENSQVYQLDFGGRVTQESAKNFQIEYHGKQVMQFGRIDGNAYTLDFQYPFSA
LQAFAVALANVTQRLK
NT seq 4011 nt   +upstreamnt  +downstreamnt
atgcatcttcatttcgagaggaacgtgaacgctaagtgcgattgcacgatattgtcgctg
tcatggatggggaaagtgcctgacgagctgccagaggaggagggttggaaattgaaccgc
aacaactactatcaagaaggctggctggcgacgggtaacgtgcgcggcgtggtcggcgtc
accttcacctcgtcgcacgcgcgccggccgcacgagttgccgctcagaaccaactacaac
cttcggggacatagatctgatgtcatactggtgaaatggaacgagccataccagaagttg
gcgtcgtgcgacagttcgggggtcatcttcgtgtggatcaagtacgagggtcgctggagc
atagagctgatcaacgacaggagcacgcccgtcacccacttctcctggtctcatgatgga
cgcatggcgcttatctgctatcaggatggcttcgtgctggtgggttcggtggcgggccag
cggtactggtcgtccatgctgtctctggacgcgcgcatcacgtgcggctgctggaccccg
gatgacaaccaggtgtacctgggcacagcgtctgcgcagctcgtagttatggacgtgcac
ggtgccatggtctcacaggtgcaactagtggctgagggcggcataacatccatggcttgg
tcgtgcgagaagttcaaaatggaggaaggcgaagaaagcaccgaaagcaatggcggacac
gtattagctgtggcgttgggtaacggggagatagtgttgttgcgtggacatgatgacgtc
agcccagcgaggataagcactggactcagggggaacactctggctatggagtgggccaac
tcgagagaactcctcgccgttgctgggaccttgttacctgaaacagacgagccgcccgac
tcgcctccctttaaaaacgtggtcaaattctactcggatacaggcgcgttaatttataca
gtgccgataccctatacacaggcacgcgtaacagcattaacatggggtcacgcggcgcgg
cggctgttcgtgagcgtggggggcgccgtgtgtactgcgcgcgtgtggcgtgtggtggcg
ccactgcaactgttggccagagtacgagcggctcaggcgctgagagaaccacgtctggcg
aggttactgccgctcccgccaagattgcagccggcgttagctaacctcttcgctcatact
atacggtgtaacgtgccagaaataagtgaactccgcgtgttcgtgtcccggccgccgggc
gccggggctcgattacactgcaccatgctgcgtcacgatgacgaggaggctggagcttat
actctgtacctggagcatctgggaggactcgtgccgttactgaaaggccgccgaactagc
aagatcagacctgagtttgttatattcgaccctcaagccgaaggtgccgtcaccaacccg
gtgcggtgtagcagcaacagtagtagcagcagcggcaccggcagcagcagcagcggcggc
agtgtggccggtgtcagctcgcccagagtgacgcgacgaccgccgccgcaaggacaaact
tcctcctctgatacggagccggaagaaggttgctcgggctctcccagactacagcgccgc
cgccgcgctcgctcgcgccgcaagatgcgccacgcgagcgacaaggacgacgcgcctgac
gaactcgcctacatcgactccttgcctgaggacgtaagactggtagaagtgacctccaac
atatggggcactaagttcaaaatgcacggcctagcgaaaaacgttccggcaaacttagga
caagtgacgtacaaaacgtccttactacacctccaaccgcgacagatgacgctcatgatt
acagaacttcgggacgactacccggtgggaccagacccaaacttcaacccaaatatattc
tcggaggacgaggaagaagtcttccagtctatggacactatcaattctccgtcgcacact
aacaataacatcagaagaaagttaacgctgagcgagagaataaacaacactaataacatc
atgaatcaaactgacgtttattcgacgaacaataacaacagtagtggaccgtcgctcgcg
cgagcagaatcttacgacgagtttccatacattgatactaacgatttgagtagcgttccc
gagccagtgtacacagtgaggcgcgggcacgcggcggcgggtgcgggggggcgccacgcc
atctccccgctgcgctgcgagggctccgtgcccacgctgcagtcccccaagaacgccgtc
gcgcccacagacatcatttttgagagaccctccccgcaggccgtcacatgcggaggacgc
ggagacttctgtggacgcgcggactacgctgtacgcgataacgtctccctcaaaaccaac
ctctccaacatagaacagcaatcgttcagcttaaacttaaccctagaaccgagtaggcag
gtcacaatcaagaagtgcgacagccacgtcgccgacaactgcctctcgaaactgcggaaa
aatatctgcagtagaggcgaggcatcgtacgatatgaacactaggatattgaaatcgttg
tgtaataagaattacgaacacgaagttcatcctgatgcgatgacgaggcgggtggagacg
ctgaagaatttgcagaagggtgaagacctaaagtacattgacgaagagacacctgttgaa
acgaacattagtaacatagttgaaagggggagggaggtgagagtgcagaggaccactaca
gtcgtgccgatcagtccggtgtgcgctagcgtgcccgtgtacgataccatgacgaggagt
tgcagcgtgggctacctggacctcgtggacccgcaagtgctgcacgcgcacgtcagcctc
acggcgctgcgcggggaaccgccgagacggctcatattagtgaacaacaagcgccagcgc
aggccgcgacgacatcagcgcaacgccgacgcgaaacaggccgagaacgcgaagactccg
agtttgaagaaatgcgggaaatcgaagagcttagactcgagcgagctttcggtggcggcg
gacaagaacgttaggaatttgaagtctgaaccgtcgaaagcggacgtcgtttccgggaac
tctagcggtcggtgtacgagcacgggcacagaggacaccagcacgacgagcgcggaagag
ggtgggcggcggtctcggcgggactacccggtgtgcacggtgtgccgcctcgtggcgccc
tacgaccgccgcccgcccgcgccgccgccctacgtgtgcgcggcctgcgggcccgcgtcc
cgccccgcgccgccccgcgacccgcccgcgcccgcgcccgttagccgcccgcccgctgac
agcgactcagactacagcaagtattatagttcgctagagcagcttgctctacgtttgttg
gcgtcgcgatcggggcggggctcgcgcagtgcgcaggcgcgggaggtgagctcggcgccc
gcctccccgcgccccgcgagggccgccccgccccccgcgcccgccacaccgaggcggacc
agatactcctctgcctcgcctataagacaattgctcaattcgcccctcctgaaccggaga
cgcaacaagaagccgtccgagagctccgacgacgagtactccaacggctacaacgaggtc
aacagcaaaaactaccgcgacttggaaagcttccagaaagcacagctaagaaataagcta
aaacgctgcggcactgtcggagggccgtgcccggcgtcgtcgcggagacagctggtgatg
cacaataaggcgcccatgtggaacgagaacagccaagtctaccaactggacttcggaggc
cgagtcacgcaggagtccgccaagaacttccagatcgagtaccacgggaagcaggtaatg
caattcggtcgcatagacggcaacgcgtacactctggacttccagtacccgttctcagcg
ctgcaggccttcgcggtggcgctcgccaacgtcacgcagcggctcaagtga

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