KEGG   Amyelois transitella (navel orangeworm): 106142846
Entry
106142846         CDS       T09957                                 
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106142846
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:atra03041]
    106142846
   03400 DNA repair and recombination proteins [BR:atra03400]
    106142846
Spliceosome [BR:atra03041]
 Complex B
  Other components
   Prp19 complex
    106142846
 Complex C
   Prp19-CDC5 complex
    106142846
DNA repair and recombination proteins [BR:atra03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    106142846
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect Rap1_C
Other DBs
NCBI-GeneID: 106142846
NCBI-ProteinID: XP_013200212
LinkDB
Position
9:join(8593418..8593462,8593545..8593810,8594043..8594173,8594467..8594626,8595067..8595235,8595639..8595773,8596328..8596482,8597132..8597290,8597642..8597717,8598136..8598228,8598558..8598732,8599167..8599349,8599615..8599820,8600131..8600293,8600633..8600772,8601133..8601273)
AA seq 798 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQKKEEGEDMGDDP
RKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELSAAGIAVPIRRKKKRGVDYNSEIPFEKRPAAGFYDTSTEVVDPMAPDFS
RLRQQHLDGELHSEKEERDRRKDKSKLKQRKENDVPQAMLMGDQPARKRSKLVLPEPQVS
DQELQQVVKLGRASEAARAAAGAAGAASDALLADYALTPAPATALRTPAQHQDRILMEAQ
NVMALTHVDTPLKGGLNTPLHQSDFSGALPQSQALATPNTVLATPFRSSRSEVSTPGSFN
TPSQNASQTALATPGLRDKLSINPEDRLSGGDTPQVANQLQKQLKATVRNALQSLPAPRN
DYEIVVPDSQADDADSVASHAALVEDQADADARLLREQEEKRAAALALRSRAVQRGLARP
LEVNAAVLRGAGALAPLQQAEELLKAEMVTMLHYDALKDPPPGVDKKRAVQLQASHLAYL
EQHPYEEFTAEELDAAKAELTKEIEIVKAGMGHGDLSIDAYTQVWEECLAQVLFLPGQNR
YTRANLASKKDRLESAEKRLEQNRNHMAKEAKKCSKMEKKLRVLTGGYQSRAASLIKQFQ
ELQDQIEQANLELSTFKFLAEQEKAAIPRRIESLTEDVNRQTDREKQLQKRYGELQAELE
ELQKGKPVKESQAKMIED
NT seq 2397 nt   +upstreamnt  +downstreamnt
atgccgcgaattatgataaaaggcggcgtttggcgcaacacggaggatgaaatcctcaaa
gcggcggtgatgaaatatggcaaaaatcagtggtctcgtatcgcatctttgcttcatcgg
aagtcagccaagcaatgtaaggctcgatggtatgagtggttggatcccagcatcaagaag
acagaatggtctcgggaagaggacgagaagttgctgcacctggccaagctgatgccaaca
caatggaggaccattgctcctattattggacgcacggctgctcaatgtttggaacgatat
gaatatttactggatcaggcacagaagaaagaggagggagaggatatgggagatgatcct
cggaaactgaagcctggcgaaattgatcccaaccccgagaccaagcccgccagacctgac
cccaaggatatggatgaagatgaattggagatgctatcagaagcccgcgcccgtctcgcc
aacactcaaggcaagaaagctaagcggaaggcccgagaaaagcagctggaggaggctcgt
cgtctggccgctctgcagaaacggcgagagttaagtgctgcgggcattgctgtgccaatc
aggcgcaagaagaagcggggcgttgattacaactctgagattccgtttgaaaagcgtccc
gccgcgggcttctacgacacttccaccgaagtcgtagatcccatggccccggatttctcg
aggctccgtcaacagcatctggatggggaactacattcagagaaggaagagcgcgaccgt
cgcaaggacaaatccaagttgaagcagcgcaaagagaacgacgtaccccaggccatgttg
atgggagatcagcccgctcgcaagaggagcaagctagtgttgcccgagccacaagtctct
gatcaggagctgcagcaggtggtgaagctgggccgcgcgtcggaggcggcgcgcgcggcg
gcgggcgcggcgggcgcggcgtcggacgcgctgctggccgactacgcgctcacgcccgcg
cccgccaccgcgctccgcactcctgcgcaacaccaagacagaatcctgatggaggcccaa
aacgtaatggcactgacacacgtagatacgcccttgaagggtgggctcaacactccactg
caccaatcagatttctccggggccctgccgcagtcacaggcactagctacgcccaacact
gtactagctacacccttcaggtcatcgcgtagtgaagtatcaacgccgggtagtttcaac
acgccaagtcagaatgccagccaaactgcacttgcgacgccaggtcttcgtgacaagttg
agtatcaaccctgaagatagactgtctggtggcgacacaccacaagttgccaaccagcta
caaaaacagctaaaagcgaccgtgcgcaacgccctccaatcgttacccgcgccccgcaac
gactacgagatcgtggtccccgacagccaggctgacgacgcggactctgtcgcctctcac
gctgctctcgtggaggaccaggccgacgctgacgccaggctgctcagggaacaggaggag
aaacgcgcagcggccctggcgctgcggtcgcgcgcggtgcagcgcgggctggcgcggccg
ctggaggtgaacgcggccgtgctgcgcggcgcgggcgcgctggcgccgctgcagcaggcc
gaggagctgctcaaggccgagatggtcaccatgctgcactacgacgccttgaaggacccg
ccgccaggtgtcgacaaaaagcgggcggtacaactacaggcatcacatttagcgtaccta
gaacagcatccgtacgaagaattcacagcggaagaactggacgcggctaaggcggagctc
accaaggaaatcgaaatcgtgaaagcgggcatgggccatggagacctcagtatagacgcg
tacacgcaagtgtgggaagaatgtctggcgcaagtattgttcctgcctgggcaaaacaga
tatacgcgagcgaacctggccagcaaaaaggataggttagaatcagctgagaagcggtta
gaacagaatcgcaaccacatggccaaagaggcgaagaagtgttccaaaatggagaagaaa
ctaagagtattgacaggtggttaccaaagcagagcggcttccctcatcaagcagttccaa
gagttgcaggatcagatcgagcaggccaacctagagctgtccacattcaagtttctcgca
gaacaggagaaagccgcaattccgcgcaggatagagtctttgacggaagacgtgaaccgt
caaacagaccgcgagaagcagttgcagaagagatacggagaactgcaagcagagttggaa
gagctacagaaggggaaaccggtcaaagagtcacaggcgaagatgattgaagattag

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