KEGG   Amyelois transitella (navel orangeworm): 106142925
Entry
106142925         CDS       T09957                                 
Name
(RefSeq) DNA polymerase theta
  KO
K02349  DNA polymerase theta [EC:2.7.7.7]
Organism
atra  Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:atra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:atra03400]
    106142925
Enzymes [BR:atra01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     106142925
DNA repair and recombination proteins [BR:atra03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    106142925
SSDB
Motif
Pfam: DNA_pol_A POLQ_helical DEAD HTH_61 Helicase_C ResIII DNA_polI_exo1 Helicase_dom4_arc Dimerisation HHH_5
Other DBs
NCBI-GeneID: 106142925
NCBI-ProteinID: XP_013200333
LinkDB
Position
9:complement(join(8904694..8904983,8906237..8906501,8907417..8907744,8908895..8909064,8910948..8911129,8911591..8911774,8911984..8913956,8914043..8914167,8914251..8916400))
AA seq 1888 aa
MKLKAFFFIILNEMAEVIDSQLLAENVGFLENCFDNSFSLQTSLHIVKEYAAEEAYKVNH
TKGFSQNKSRNNLLQNKTISLDASAIILAKTRNTQVINKNLKAWGLPPEISAKYKQRGIN
EMFDWQVTCLSNPKILLDCCNLVYSAPTSAGKTLVAEILTIKTILERQKKVIVILPFVSI
VREKMFYLQDILSTSGIRVEGFMGSQSPPGGLQAVHLAICTIEKANSLINRLLDEGNISD
IGAVIVDELHLLGDRHRGYILELLLTKIKYVSSKIDDCHIQIVGMSATLPNLEILAKWLN
AELFITDFRPIPLDEYCLVGNKYFDKNGKLVSTIEKESLTAESDYVLQICLDTIKEGCSV
LIFCMTKNRCENLAQSISSSFYKLGCSGSDIGLILRSQLKSESIFEVLEQLKNCPVGLDQ
ILKTTISFGVAFHHAGLTFDERDIIEGGFKSGAIRVLVATSTLSSGVNLPARKVIVRSPV
FQRLPINILTYKQMIGRAGRMGKDLKGESILVCTDTEKKVGFDLMMGALDPVKSCIESED
KYMRAVLEMIASNVVCTKEELDLYSKCTLLYVQQNVTVSQNSLLDSTLDELINYELVRIQ
DDGNENRYVATPLGKACLSSSMAPNDGLSLFCELQKARQCLVLETDLHLIYLVTPYSVSS
QWGEIDWLHLLTLWESLTKAMKRVGELVGVQESFIIRCLRGANKLTNVQNKLNIHKRFYT
ALALQDLVNEVALSEVATKFQCARGFLQSLQQAAATFAGMVTAFCRQLGWKNMEMLISQF
QDRLHFGIHSELLELMKLPSLNGIRARTLFDAGFETVSSIASADVNMIENTLHKSVPFQS
NKEREGDDNEDIRKRNKIKSIWITGCCGMTTRQAAESLISEARKYLENEIGVTEIKWKAS
EQVNEMHSIHNKNSITDLKQEINSTVVNKTSIKSWIKIDKEQVASTHPDPCKIKEEQLVV
KKEHTEIAINQRSDDINNIICLSNKLEDRNEFLSNRFSSPLVENQPHISLNRIIEDEIKS
SPTILPKNVTVQDELIWDSLNFTDVAVENITKIKSAYNSASPNMSFGDSEEKIEESLNTK
STSTNLKSVNDISLFSSDGDNTLFDESLPIDLISSKLLNGEDSAAKVVFESKDKNKSDYN
VTNLQSNTILKAFKTTLIEVEEEEDIKLVYDDENKMSENELEIAFNTSEEVMNTQQVKKT
SIKNIFISPLKRQAENENSVLSQPSYKKLKVNNIKERSQNYSRFDITNIKLNNAKSKHFF
IQLNEFKYQCYVLKEDDIYTNFDILRNVTEAGIYLDIQPVTISSNQLIGSNILKLEKGEP
QMRNSIECKKHPIRGIALYFKDICILLDLTDDVLIQEKLSGWLQMKSLKLNVMNLRSMIL
ALKHTFGININSQCVDISLAEWLLNSDEKIPEILDLVKKYVSVDLSTVFISVDGKSKKWK
QLESFENVCVKAWCLWMVAERQQECLLRQYVAARDTFEIETQTARILSDCEFQGICVDKD
LAARLLIDVRNSQETLQKKAYKICGYHFNFNSSKDVAKVLGIYKGRKVSTKKSVLTSHNS
PMASIVIFWRKLNSILTKTLYPLTEKACVYSAGDRINPSYTMFTCTGRVSMHEPNLQNVP
RTFSMPETYLTIEDTNSSDLVEFNCRNIFKAARGHVLVSADYCQLEMRVLTHYSEDPVLM
RIMKSDVDVFKSIAASWSNLPEEEVDDDLRQKAKQLCYGILYGMGNRTLSQHLDVTELEA
AVFMDTFYKTFPAIRSFTQGLIEECRKKGYVETLMKRRRFLKDISSNIGAKKSAAERQAV
NTTIQGSAADIAKAAMCAIDNKTNSRTYKPRLILQMHDELIYEVPESSKEWFIQVIKNVM
EDTVRLKVPLPVKVKSGATWGSLEEVKS
NT seq 5667 nt   +upstreamnt  +downstreamnt
atgaaattaaaagcatttttcttcatcatattaaacgaaatggctgaagtgatagattct
caattactagccgaaaacgttgggttcctcgaaaattgtttcgacaattcgttttcgcta
caaacatcattacatatcgtaaaggaatacgctgctgaagaggcttacaaggtaaaccat
acgaaaggcttttcgcagaataaaagtaggaataacttattgcaaaataaaaccatctcc
ttagacgccagtgcaataattctagctaaaactcgaaatactcaggtcattaataaaaac
ttaaaagcatggggcttaccacctgaaatttctgcaaagtataaacagcgtggcatcaat
gaaatgtttgattggcaagtgacctgcttaagcaatccgaaaattctattagattgttgc
aacttggtatattcagccccaacttcagctgggaaaactcttgttgctgaaattttaaca
attaaaaccatattggaaaggcaaaaaaaagtgattgttatactgccttttgtctctatt
gtgcgagagaaaatgttttatttgcaagacattttatcaacatctgggattagagtggaa
ggttttatggggtcccagtctcctccaggaggtttacaggctgttcacttggcaatttgt
acaatagagaaagctaatagtctgattaacaggctcttggatgaagggaacatatcagat
ataggagcggtcattgtcgacgaattgcatttgttaggagatcgacataggggatatatt
ctggagcttcttttgacaaaaattaaatatgtatcatcaaaaatagatgactgccatata
caaattgttggcatgtctgcaacattgcctaatttggaaatattagctaagtggctaaac
gcagaattatttatcacagatttccgaccaataccacttgatgaatattgtttagttggt
aacaaatacttcgataaaaatggaaaacttgttagtaccattgagaaagaatcacttact
gcagaatcagattatgttctacaaatttgtttagatacaattaaggaaggatgttcagtt
ttgatattttgtatgaccaaaaacaggtgtgaaaatttagctcaaagtatatcatcttca
ttttataaacttggctgttcaggaagtgatattgggttgattttaagaagtcagctgaaa
tccgaaagcattttcgaagttcttgaacagctaaagaactgtccagttggtttggatcaa
attttaaaaacaacaatatcatttggtgttgcatttcatcatgctggtttaacatttgat
gagagagatatcatagaagggggtttcaaatcaggagcaatcagggttttagtagctaca
tctactttgagttcaggagtcaatttgcctgcaagaaaagttatagtgagatctccagtt
ttccaaagactaccaattaatattttaacatataaacaaatgattgggagggcagggcga
atgggtaaggatttaaagggagaaagcatattagtttgcacagatactgagaagaaggta
ggatttgacctcatgatgggagcattagatcctgttaaaagttgtattgagagtgaagac
aagtatatgagagcagttcttgagatgatagccagtaatgtggtctgtaccaaagaggag
ttggacctctattcaaaatgcactttactatatgttcagcaaaatgtaacagtatcacag
aattcactattagatagtactttagatgaattgataaattatgagttagtaagaattcag
gatgatgggaatgaaaatagatatgtagccactcctttaggcaaagcatgtttatcttca
tctatggctccaaatgatggtctgtcactattttgtgagcttcaaaaggctcggcaatgt
ctggttttagagacagatcttcacctcatatatttagtgacaccatatagtgttagcagt
cagtggggtgaaatagactggcttcacttgttaactttatgggagtcattaacaaaagcc
atgaaaagagttggtgagttagtgggggtgcaggaaagcttcatcattagatgtttgaga
ggagccaataaattgaccaatgtacagaataagttgaacatacataaaaggttctataca
gcacttgctttacaagatttagtgaatgaagtagcactgtctgaagtagcaacaaagttc
caatgtgcaagaggatttcttcaaagccttcaacaagcggctgctacatttgctggaatg
gtaacagctttttgccggcagcttggatggaagaatatggaaatgttaatatcacagttt
caagatcgattgcattttggtatccattcagaattattagaactaatgaaattgccgtct
ttaaatggaatcagagctcgtacactatttgatgctggtttcgaaacagtgtcgagtatt
gcttcagctgatgtcaacatgattgaaaatacgctccataaatctgtaccatttcaaagt
aacaaagagagagaaggagatgataatgaagatattagaaaacgtaataaaataaaaagt
atttggataactggttgttgtggtatgactacaagacaagctgcagaaagcctcatatca
gaagctaggaaatatctagagaatgaaattggcgtaacagaaataaagtggaaagcttct
gaacaagtaaatgaaatgcatagtattcataataagaatagtataacagatttaaaacaa
gaaataaatagtactgtagttaacaaaacttctattaaaagctggataaaaattgataaa
gagcaagtggcatccacacatcctgatccctgtaaaattaaagaagaacagttagtggtt
aaaaaagaacatactgaaattgctattaatcaaagaagtgatgatataaataatataatt
tgtctatcgaacaaattagaagatagaaatgaatttttatctaaccgtttttctagtcct
ttggtagaaaatcaaccgcacatatctctaaatagaataatagaagatgaaataaaaagc
agccctacaattttacctaaaaatgtcactgttcaagatgaacttatttgggattctctc
aattttactgatgttgctgttgaaaatattacaaaaattaagtctgcatataactcagct
tcaccgaatatgagttttggtgatagtgaagagaaaatagaagaatctcttaatacaaaa
tctacttcaacaaatttaaaatctgtaaatgatataagtttgttttcttctgatggtgat
aatactctttttgatgaaagtttgcctatagatctgatatctagtaaattgcttaacggc
gaagattcggcagctaaagttgtgtttgaatcaaaggataaaaataaatcagattataat
gtgactaacttacaaagcaataccatattaaaagcttttaaaactactttgatcgaggta
gaggaagaggaggacataaaactagtttatgatgacgagaataaaatgagtgaaaatgaa
ttagaaatagcatttaacacttcagaagaagttatgaatactcaacaggtgaaaaaaaca
tctatcaaaaatatttttattagtccgcttaaacgacaagctgaaaacgaaaatagtgtt
ttatcacaaccttcatataaaaagttgaaagtgaataatataaaagaacgatcgcaaaat
tatagcagatttgacataacgaatatcaaattaaacaatgccaaatcaaaacattttttt
atacaactaaatgaatttaaataccaatgttatgttctaaaagaggatgatatttacacc
aattttgatattttgaggaatgttacagaagctggtatatatttagacatccaacctgtg
acaataagttcaaaccaattaattgggagtaacatattaaaactagaaaaaggtgaaccc
caaatgagaaattctattgaatgtaaaaagcatcccattagaggaatagctttgtatttt
aaagatatctgtatcttactagaccttactgatgatgttttaattcaagaaaaactctct
ggatggttgcaaatgaagtcattaaaattaaatgtaatgaatttaagatctatgattctt
gccttaaaacacactttcggcataaatataaattcgcaatgtgttgatatttcattggct
gaatggttgctgaatagtgatgagaaaatacctgaaatcttggatttggtaaaaaaatat
gtcagtgtagatctatcgacggtttttataagtgttgacgggaaatcaaagaagtggaag
cagttagagtcgttcgagaatgtctgtgtaaaagcttggtgtctatggatggtggccgaa
aggcagcaggagtgtttgttgaggcagtatgtagcggctcgagataccttcgaaattgaa
acacaaactgcgagaatactctcagactgcgaatttcaaggaatttgcgtcgataaagat
ctcgccgcgcgacttctgatcgacgtcagaaattcacaagaaactctacaaaagaaggcc
tacaaaatttgcggttaccatttcaacttcaattcatcgaaggacgttgctaaggttctc
gggatatacaaaggtcgcaaggtgagcaccaagaagagtgtgctgacatcccacaacagt
cctatggccagcattgtgatattttggaggaaactgaactctattctaacaaagactttg
tatcccctaacggagaaggcgtgcgtttatagtgctggagacagaataaacccatcgtac
acgatgttcacttgcacgggccgcgtgagcatgcacgagccgaacttacaaaatgtgcct
cgaacattctccatgcctgaaacgtatcttactatagaggatacaaactcaagtgatctg
gtagagtttaactgtaggaatatattcaaagcggcgcgcggccatgttttggtgtctgcg
gattattgccagttggagatgagggtcctgacgcattatagcgaagacccggtgctgatg
aggataatgaagtcggatgtggatgtgttcaagtctatagcggcttcttggagcaatctg
cctgaagaagaggtggatgatgatctccgtcaaaaggcgaagcagctatgctacggaatc
ctctacggtatgggtaaccgcactctctcgcagcacctcgacgtgacagaattagaggcg
gcggtcttcatggacactttctacaagacgttccccgccataaggtccttcacgcaaggt
ctcatcgaagagtgcaggaagaagggatacgtcgaaacgctcatgaaacgacgcaggttc
ttgaaagatattagcagcaatatcggtgcgaaaaagagtgccgctgagagacaagcagta
aataccacgattcaaggatcggcggcggacatcgcgaaagcggcaatgtgtgccatagat
aacaaaacaaactcacgaacatataaacctagactgatccttcaaatgcatgatgaactc
atttatgaagtgccagagagtagtaaggagtggttcatacaagttataaaaaatgtaatg
gaagacactgttcgtctgaaagtgcctttacctgtcaaagtaaagagtggggccacgtgg
ggttctttggaagaagtcaagtcttga

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