Amyelois transitella (navel orangeworm): 106143080
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Entry
106143080 CDS
T09957
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atra03041
]
106143080
Spliceosome [BR:
atra03041
]
Common components
Common spliceosomal components
General mRNP proteins
106143080
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
Motif
Other DBs
NCBI-GeneID:
106143080
NCBI-ProteinID:
XP_013200506
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All DBs
Position
2:join(6110088..6110141,6112768..6112847,6113211..6113751,6114039..6114305,6114377..6114592,6114894..6115018,6115459..6115747)
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AA seq
523 aa
AA seq
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MAEDLDVEAMLEAPYNKSDNTSSSKHRSDKYTDKHKEKERDSGRRRSRSREKRRSRDRDS
RRSRDRDDKKDRDRDRDRERDRDRRDRDRDRSHRDKDRDREKERERDRDKRRTSKDKERS
RERDRSRDKSHKREKSREKERDPSKEYRSKSRGLEPKLEELPPEERDLRTVFCMQLSQRI
RAKDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDAESVPLALGLTGQKLLGVPII
VQHTQAEKNRVGNTLPNLAPKASNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMT
DPENGKSKGYGFLTFHHAADAKKAMEQLNGFELAGRPMKVGNVTERADGGSNTRFDADEL
DRAGVDLGATGRLQLMFKLAEGTGLQIPPAAASVLMGTGSALVAPQPQVAPPIATQCFML
NNMFDPATETNPNWDIEIRDDVISECNKHGGVLHVYVDKASPQGNVYCKCPTIATAVASV
NTLHGRWFAGRVITAAYVPLVNYHSLFPDAMTALTLLLPSRQR
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagatttagatgtagaggctatgttggaagcgccttataataaatctgataac
acttcctcttcaaagcatcgctcggacaagtatactgataagcacaaagaaaaggagagg
gacagcggtagaagacgaagccgatcaagagaaaaaagaagatcgcgtgaccgggactct
cgccgatccagagatagagatgacaagaaggacagggatagggacagagatcgcgaaaga
gatagggaccgtagagatcgcgatagggatcgtagtcatagggacaaggaccgggacagg
gagaaagagcgggagcgtgacagagacaaacggcgaactagtaaagataaagaacgcagc
cgagaaagagatcgcagtagagacaaatcgcacaaaagggagaaaagtcgcgaaaaagag
agagacccaagtaaagaatatcgctccaaatcaagaggcctcgaacctaaattagaagaa
ttgccaccagaagagagggatctcagaactgtgttttgtatgcaattgtctcaaagaatc
agggctaaagatttagaagagtttttctcatcagttggcaaagtcagagatgtaagactt
attacatgtaataaaaccagaagattcaaaggaattgcttatatagaattcaaagatgca
gagtctgtaccattggctttgggattgacaggacaaaaacttttaggagtaccaatcatt
gttcagcatacacaggcagagaaaaatagagtaggcaatacattgcctaacttggctcca
aaggcgagtaatggcccaacaagactgtatgttggctctctacattttaatattactgaa
gacatgttaagaggtatatttgagccatttggaaaaattgatcacattcaacttatgact
gacccagaaaatggcaaaagtaaaggatatggatttttaacattccatcatgctgccgat
gcaaaaaaagcaatggaacagcttaatggctttgaactggcggggagaccgatgaaagta
ggcaatgtaactgagcgtgctgatggagggtctaatacaagatttgatgcagatgagtta
gatagagctggtgtcgatctgggagctactggccgtttgcagcttatgttcaaacttgct
gagggaacaggtcttcagataccaccagctgcggcgtcagttttaatgggcactggctca
gcattagttgctccacaaccacaagtggcaccccccatagcgacacaatgcttcatgctc
aacaacatgtttgatcctgctacggaaacaaatccaaattgggatattgagatcagagat
gatgtcatcagcgagtgcaataaacacggtggcgtcttacatgtttatgtggataaagca
tcgccacaaggaaatgtttattgtaaatgtccaacaatagctacagctgtagcatccgta
aacactttacatgggcggtggttcgcaggtcgtgttatcactgcggcctacgtacctttg
gtcaactatcattctctattcccagatgcaatgactgctcttacattattgcttccatcc
cgacaacgataa
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integrated database retrieval system
