Amyelois transitella (navel orangeworm): 106143122
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Entry
106143122 CDS
T09957
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1 isoform X1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
106143122
Enzymes [BR:
atra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
106143122
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Ortholog
Paralog
GFIT
Motif
Pfam:
GDPD
CBM_20
C2_GDE1
Enterochelin_N
Motif
Other DBs
NCBI-GeneID:
106143122
NCBI-ProteinID:
XP_013200574
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All DBs
Position
2:complement(join(5694282..5694659,5695051..5695197,5696455..5696589,5696764..5696886,5696974..5697183,5698821..5699046,5700221..5701262,5703335..5703452))
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AA seq
792 aa
AA seq
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MSAIQNVNAKSHLSRDEYYSNNTSTSISQQVLSYFAHYTHNRKKKSFIPTKKMTTKEPEP
QPEITSQEWTFTVSVPDVGPREKVYISGSIPELGEWDYKRLVLLENQPGTDIWSTKIIIP
NTCDVCYRYAICIPIEDTSEVIVRYWETSIHPRVILESMMHPITDIFGEINSENKVTRGW
LTVQSIIQFKFMKNPLKLKSRLSERLMNIKVTPVKLSFGTEHPVEDSLSVDTVDGESLPA
VIVEVSTLNNDPAICSPKQQEQFGTEYKPNDVLLVNVITPNLQGLAYLVDVFSYSSRASS
EDPPCHVGYTYVLPNMFKPSEGALELPVTCNVKHRPLGTINIEYLIIHPMPEQLCDMQVS
YAKHWDPTWTGLEVGHRGLGASFKNKEGNNIRENTVASLKKAAASGADLLEFDVQLSKDM
IPVIYHDFHVCISMKRKKEVEFSEMLELPVKDLTLEQLQKLKVYHLVEGRNHEILFFDED
LEEHQPFPTLEDVMKKIDVHVGFNVELKWTMEMDDGTFELNNPFDMNTYVDKVLEVVLKH
AGERRIVFSCFNPDICTMVRYKQNKYPVMFLTLGITNRYQAYRDPRCQSIPAAVQSAVSS
DILGVVVHTEDLLRDPTQVQLATNAGLVIFCWGDDNNDKNTIKRLKEMGLHAVIYDKLDQ
YTTKEVKESIFLVEARESQREIMRLAALDELAASESSASALTPPAPANRLFLDLTMRDKI
QDRSTVTSLESLASSVDLRDDNNADPNSLKRNRDTIGNINKDYQVKEQRNSFRNLFTAGD
GSKGTKKSRKSN
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaatacagaatgtcaatgcaaaatcgcatttatctcgagacgaatattactca
aacaacacaagtacatcgataagtcaacaagtgctttcatattttgctcattatactcat
aaccgcaagaagaaatcctttataccaactaaaaaaatgactacaaaggagccagaacct
cagcctgaaataacttcacaggagtggacttttacagtatcagtaccagatgttggcccc
agagaaaaagtgtatattagtggaagcatccctgaactgggagaatgggactataaaagg
ctggtcctattagaaaatcaaccaggaactgatatatggtctactaaaataatcataccc
aatacttgtgatgtatgctatagatatgctatatgtattccaattgaagatacttctgaa
gtcatagtaagatactgggaaactagtattcatcctagagtcatcttagaatccatgatg
catcccataactgatatttttggtgaaataaattctgagaacaaggtcacaagaggttgg
ctaactgtccaaagcattatacagtttaagtttatgaaaaatcctttaaaattgaaaagc
cgtcttagtgaaagactaatgaatatcaaagtcactccagtaaaactgtcttttggaact
gaacatcctgttgaagattctttaagtgtggatacagttgatggtgaaagtcttcctgca
gtaatagtagaagtatccacattaaataatgaccctgccatatgtagtcccaaacaacag
gaacaatttggtacagagtacaaaccaaatgatgttttgcttgtgaatgttataactcca
aatcttcaaggtcttgcatacctagtagatgtcttctcctatagttctcgtgcctcatct
gaagacccaccttgccatgttggttacacatatgttttaccaaatatgtttaagccttct
gaaggtgcattggagttgccagtgacttgtaatgttaagcatcgtccattggggacaata
aacattgaatatttaataattcacccaatgccagagcagctgtgtgatatgcaagtatca
tatgcaaaacactgggatccaacatggactggcttagaagttggacaccgtggacttggt
gccagttttaaaaataaagaaggcaataatattcgtgaaaatactgtagcttctttaaag
aaggcagctgcaagtggtgcagatttgcttgaatttgatgttcaactaagcaaagatatg
ataccagtaatatatcatgactttcatgtgtgtatctcaatgaagagaaaaaaggaagta
gaattttctgaaatgttagaattgcccgtgaaggacttgaccttggaacagcttcagaaa
ctaaaggtgtatcatttggtggaaggacgtaatcatgaaatattattctttgacgaagat
ctagaggaacaccaaccatttcctacattagaagatgtcatgaaaaagatagacgttcat
gtcgggttcaatgtggaactaaaatggacgatggagatggatgatgggacttttgagtta
aacaatcctttcgatatgaacacatatgttgataaggtattggaggtagtactaaaacat
gctggtgagcgtcgtattgtgttctcctgtttcaacccagacatttgcacaatggtgcga
tacaagcagaataaatatcctgttatgtttctcaccttgggtataacgaatagataccaa
gcttaccgggacccccgctgccagtccatccccgccgccgtgcagagcgcagtcagctcg
gacatccttggcgtagtcgtccataccgaagacctattaagggaccctacacaggtccaa
ttagcaaccaacgccggtctggttatcttttgttggggagatgataacaacgacaaaaac
acaatcaagagattgaaagaaatgggtctacatgctgtgatatatgataaactcgaccaa
tatactaccaaagaagtcaaggagagcatatttcttgtggaggcgcgcgagtcgcagcgg
gagatcatgcggctggcggcgctcgacgagctggccgccagcgagagctccgcgtccgcg
ctcacgccgcccgcgcccgccaacagactgttcctagacctcaccatgcgagacaaaata
caagaccgctctaccgtcacctccctagagtcgctcgcctcctctgtcgaccttagagat
gataataacgccgaccccaattctcttaagcgcaatagagacaccattggaaatattaat
aaagattaccaagtgaaagaacagagaaattcttttcgtaacttgtttactgctggagat
ggttctaaaggaacaaaaaaatctaggaaatctaattaa
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