KEGG T09957: 106143154

Amyelois transitella (navel orangeworm): 106143154

Entry

106143154         CDS       T09957

Name

(RefSeq) RB1-inducible coiled-coil protein 1 isoform X3

K17589

RB1-inducible coiled-coil protein 1

Organism

atra Amyelois transitella (navel orangeworm)

Pathway

atra04140

Autophagy - animal

Brite

KEGG Orthology (KO) [BR:atra00001]
09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    106143154
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:atra01009]
    106143154
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:atra04131]
    106143154
   03029 Mitochondrial biogenesis [BR:atra03029]
    106143154
Protein phosphatases and associated proteins [BR:atra01009]
Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     106143154
Membrane trafficking [BR:atra04131]
Autophagy
  Autophagosome formation proteins
   ULK complex
    106143154
Mitochondrial biogenesis [BR:atra03029]
Mitochondrial quality control factors
  Mitophagy factors
   Parkin-independent mechanism factors
    106143154

SSDB

Motif

Pfam:

ATG17_like ATG11 ubiquitin TBK1_ULD

Other DBs

NCBI-GeneID:

106143154

NCBI-ProteinID:

XP_013200622

LinkDB

Position

2:complement(join(4919567..4919651,4920620..4920866,4921374..4921454,4922518..4922632,4923387..4923524,4923808..4923961,4924401..4924537,4925014..4925181,4925779..4926025,4926295..4926827,4928796..4928919,4929148..4929198,4929334..4929617,4929875..4930061,4930363..4930535,4930900..4931082,4932888..4933093,4934116..4934327,4938456..4938583,4938814..4939055,4939814..4940004,4940470..4940537))

AA seq 1317 aa
MLYVFHVDAGQMTTYDMSLTLQTVAMLKAAIERKTKTPSSSLVLLVSGGEVLKSDHMVSS
YSAGTDTNPIYMFSKPSVKESHLKKSMCSDLSPILELESGEFRSGERSFDGKSFADLKAS
VDKCCSLPATVSTVIACATLAQRFSDLAHELSRSCEQLVHEQHLQHQGWAAVVANLEDIF
NEFCDRSRNFKETFKKHRAKKEEYHQQLNTLNEVLEALGKIPILPALQVNAEAHRFSGFD
VFEEADFEGNLYRVSHPLDNSSETKHQEFGVEAFKLSEEDVFEQKDAAAKKDSMQSDDRP
VQESDEGMRFGRYSSESKDELTLLHWILARGNKDSLQDIIDYCQKGLTLIETEPLKEHEE
ELCHILEYANLHGLKQIKGIEERLYRLDQLLNEVRKREKDQHDQAASLIQYRERLNTACD
PSVLPTLVQSHRCQLEKLLKGHQAIADIRRRIIKSKDELSYILKSRLEAVLMIENSMSVQ
DAHGMLSFQCFNRLARYFVIVSQLHRAPAVFVRAVHEVARRRKFSEAHLKWASDLASKLQ
KIHEEESSRRQDFNTLFDGHFLKSLFPGMTELPPPFATQAPPVFDAKLPRITDTDVEYIA
KSFPHLTEEVPKYDMDATVKFFEQRLVSTDDKDNEEIAQTEADAEIEAKGGYFEDIIRAT
PALKVDTATCCSPAVAAAATLTEDNMDTHKINMEKLQEFLISLCSLCRTNIMFIKEELVK
LKGEINEQKKFVKGKYLEILDGWERSNQEAAIRFREHTQRMTVDHELELSDMKAAMTQKD
DVIDSLKREKEDLKLEHQKDLERLDKEHQDTKDLLEKTRMEVKELEKKLAEYDANKQVEI
KELQEKMHLDYKAEIESLRSRFRLVAITNMDRSPSESSLEKIERTDVIEISSHNAIVMQT
KENAEVEKEEAVKEAVAKCDADWRLKLEEELKSFKNKYENEKQVSNDVSRRLIAEKDRQL
DALREREQALVRESNKYRDTIQQLTDPETNDYDALLKTQFASLENDKAVLQQQVADLKKE
LERREEAEKSRDEAEKSREDDSEGRSSPKKETVSRRGVAHTPVGLPGGTLSLSSCLPGHT
VLVLWDAAHHNYTVLQEAPVMFFVYSDCLAALDLSLNVKNESERKLYAVATVESKEYCYA
KRSVNRYNMPRGSRFYRVHVKPLRAQPPPPPPCCDHKHKQDKMKRSVLSVLGENRPLKKW
LTYMHAPDMHRSVDNSQSTSSTTDDAGGSGRAEVATATLINLESPKSPAEPSVASSSSAA
TVPATSEDQLDSIEASEWPARMQVSTASAMTDMECSVGRCAGPEAGEAPELAEEAAP

NT seq 3954 nt +upstreamnt +downstreamnt
atgttgtatgtgttccatgtagatgctggtcagatgaccacctatgacatgagtctgacc
ttgcaaacagtggccatgttaaaagctgctatagaaagaaagacgaagacaccttcaagt
tccctggtgctattggtcagtggtggtgaggtcctgaaatctgaccacatggtgtcatca
tacagtgcaggcacagacacaaaccctatatatatgtttagtaagccgtcagttaaagag
agtcatctaaagaaatcaatgtgcagcgatctcagtccaatattggagttagaatcaggt
gaattccggagtggggagaggagtttcgatggaaagtcgtttgctgacctcaaggcgagc
gtggacaagtgctgctctctgccagccactgtcagcacggtcatagcctgcgcgactctt
gcgcagaggttcagtgacctcgcgcatgagctgtctaggagctgtgaacaattggtacat
gagcagcatcttcagcatcagggttgggcggcagtggtagcgaacttagaagatatattt
aacgagttttgcgacagatcaagaaatttcaaagaaacgttcaagaagcatcgcgcgaaa
aaggaggaataccatcagcaactgaatacactcaacgaagtattagaagcactaggtaaa
attccgatactgccggcgttgcaagtgaacgctgaagcccatcggttctctggtttcgat
gtgtttgaagaggcagacttcgagggaaacctatacagggtcagccatccgctggacaac
agctcggagacgaaacaccaggaatttggagtcgaggcgttcaagttgtctgaagaagat
gtattcgaacaaaaagatgcggcagcaaaaaaggattcgatgcagtcggacgaccggccg
gtgcaggagtctgacgaagggatgcgattcggaaggtattcctcagagagcaaagatgaa
ctcactctgttgcattggatattggcgaggggcaacaaagattcgttacaagatataatc
gattactgccaaaaaggactcacactgatcgagacagagccattgaaagagcacgaagaa
gaattatgtcacattctagaatatgcgaatcttcacggtttgaagcagatcaagggcata
gaggaacggttgtatcgcctcgatcagttgttgaatgaagtgaggaaaagggagaaggac
cagcacgatcaggctgcctcgctcatacagtatcgcgaacgactaaacacggcatgcgat
ccgtcagtgctgccaacgttggtgcagtcgcaccggtgtcaactagaaaaactgctcaaa
ggacaccaggccatagcggatatccgcaggcggatcattaagtcaaaggatgaactgtct
tatattttaaagtctagattagaggcggtactaatgatagaaaactcgatgtccgtgcaa
gatgcgcacggaatgctgtcgttccaatgtttcaatcgtctcgcgcggtatttcgtgata
gtatcgcagctacatcgcgcccctgccgtttttgtgcgagccgtacacgaagtagctaga
cgcaggaagttctctgaagctcatcttaagtgggcatcagatctagcgtcgaaattgcag
aaaatccacgaagaggaatcatcgaggcgacaggatttcaacactctcttcgacgggcac
ttcctcaaaagtttgttcccgggcatgacagagttgcccccgccattcgcaactcaagcg
ccgcccgtgttcgacgcgaaactgcccaggatcacggacaccgatgtcgagtacatagct
aaatcgttcccgcatttgactgaggaagtgcccaagtatgatatggatgccacagttaaa
ttttttgaacaaagacttgtctcaacagatgacaaagataacgaagaaattgctcaaaca
gaagctgacgcagaaatagaagcgaaaggcggctatttcgaggacataatcagggcgacg
cccgcgctgaaggtggacacggcgacgtgctgctcgcccgcggtggcggcggcggccacg
ctgacggaggacaatatggacacacacaaaatcaacatggaaaagctacaggaattccta
ataagtttatgcagtttatgtagaactaatattatgtttattaaagaagaattggttaaa
ttaaaaggtgaaattaatgaacagaagaaattcgttaagggtaaatatttagaaatttta
gatgggtgggagagaagtaatcaagaggcagctataagatttcgtgagcacactcagaga
atgactgtagaccacgaattagagttgagtgatatgaaagcggccatgacacaaaaagat
gacgtcatagattctctcaaaagggagaaggaagatttgaaattggaacatcaaaaagat
ttagagagactagataaagagcatcaggacaccaaagatcttttggaaaaaactcgaatg
gaagtgaaagagctagaaaagaaattggcggaatatgatgcgaataaacaagtggagata
aaagagttgcaggagaagatgcatttggattacaaagcagagatcgagtcattgcggtct
aggttccgcttagtagcaatcacaaatatggatcgttctccgtccgaatcgagtcttgag
aaaatagaacgaaccgatgttatagaaatttccagtcacaacgcgatcgtcatgcagacg
aaggaaaacgccgaagtggaaaaggaggaggcggtaaaagaggcggtcgcgaaatgtgac
gccgattggagacttaagctcgaggaggaattgaaatcctttaaaaataaatatgaaaac
gagaaacaggttagtaacgacgtgagtcgtcgcctcatcgctgaaaaggaccgtcaattg
gacgcattacgcgagcgagagcaagcgttggtcagggaaagtaataagtacagggacaca
attcaacaactcacagatcccgagaccaacgattacgatgccctgctcaagacacagttc
gcgtcccttgaaaacgacaaagccgtgctacagcagcaagtagcagatttgaaaaaggag
ttggagaggagagaggaagcggagaaaagcagagacgaagcggagaagagcagagaagat
gacagcgagggcagatcgtcccccaagaaggagacggtcagccgccgcggcgtggcgcac
acgccggtggggctccccggggggacgctgagcctgtcgtcgtgcctccccgggcacacc
gtgctcgtgctgtgggacgccgcccaccacaattacaccgtgctgcaggaagctccggtc
atgttctttgtatatagtgattgtctggccgcccttgatctcagtctgaacgtgaaaaac
gaatcggagcgcaaactgtatgccgtggcgacggtcgagtctaaggagtactgctatgct
aaaaggagtgtgaaccgctacaatatgccgcgtggttcccgcttctaccgcgtgcacgtg
aagccgctgcgcgcgcagccgccgccgccgccgccttgctgcgaccacaagcataagcag
gataaaatgaagcgcagcgttctctccgtgttgggcgaaaaccgaccgctcaagaaatgg
ttgacctacatgcatgccccagacatgcacagatcggttgacaacagtcagtcgacgagt
tcgaccaccgacgatgctggtggtagcggtcgtgctgaagtggctaccgctaccctcatc
aacttggagtcccctaaatctcccgcggaaccgagcgtagcgtccagcagtagcgcggcc
acagtgcccgcgacatcggaagaccagctggattctatagaagccagcgaatggccggcc
aggatgcaagtgtctactgctagcgcaatgacggacatggagtgcagcgtggggcgctgc
gcgggccccgaggcgggcgaggcgcccgagctggccgaggaggccgcgccctga

DBGET integrated database retrieval system