Amyelois transitella (navel orangeworm): 106143178
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Entry
106143178 CDS
T09957
Name
(RefSeq) alsin isoform X1
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
atra03036
]
106143178
Chromosome and associated proteins [BR:
atra03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
106143178
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Ortholog
Paralog
GFIT
Motif
Pfam:
MORN
WD40_RLD
PH_alsin
VPS9
RCC1
HA_Alsin
Alsin_RLD
DH_Alsin
RCC1_2
DH_ALS2
PH
Motif
Other DBs
NCBI-GeneID:
106143178
NCBI-ProteinID:
XP_013200653
LinkDB
All DBs
Position
2:complement(join(3025428..3025472,3025791..3025954,3026392..3026582,3026856..3027032,3027301..3027551,3027981..3028314,3028842..3029056,3030914..3031245,3032630..3035681))
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AA seq
1586 aa
AA seq
DB search
MNQHKFWKGLTPLEINSSSQVPEKIVKLCSLGSDFIVLGNDHGLYHCDIEEGRLGFSRIN
GISAIDISYHNEILYIIDIHGRLYKTNNSFKNKEEIVVKEDAKCCPHGFKSSSYKVKFRN
VVSSDFGQLFISSDGQLWGSGVMPQISLDTSSIKKVPFFEGRTVYSASVGQNFAAVIARK
NVKRSGNYDTESDNDDEEVFASNCSQCQTIIGLASPASVPSLSETCPLGVQISRSSEDSS
STTAPQTDVHVDAHSLTEDSSPSTEVSKVQNDVTNNPVVEIKSHQDGTVEEDDSTEAETE
THLNNEKINNIFINTDAARQFLSRQLSWVSAGEDYLVECTEKPTRIIKENVSNLTNLVYE
GVRTVGDKVATLSRHVSGSSDNNEVVELQIRINNEDLMHSCTSNCNLDDLHISTSTISSD
KQLEACRKNENVKNMAKLGKNILATELWTWGDISYGQLGIGDTVKRIKPMVVMTLSGFGL
QKVSCGNWHCSALTLDGRLFIWGNNHYHQVSFDSREDKSGPKQFTENSDSDRVRDMIATE
HHTLAYTHNENIFYMGKHTDGYTESIVNLNQKAEEEVTENGKDLTMKILDLQIPSKPQNM
CYHWRILSSGNISYCSVEEVTKSPEFQDLSIAQRYLEEMLLIYHSLIKPFLKKSKSITLH
SNIYETVCDNFGDILNITALNVLSIWQYAEKHINECDISLIKNLEEYIYLYRKYYVAVSN
LIVVGGFSQINNIVDVPSTIYSLFSDQLPSNKQKNNKKTLEAIVALAFVQPLTRLSSYKC
IAQSLLRYKTKRKKGDAQTNIEERLSKVVSSLDTLIEEQEKKRKEAEITKLFWETTGKSL
DQYKTPERRLVRESKSRALNLVNPGRFSSHWFVLFNDLFVRVNGSTPNLHPLETLWVESV
PNTDSLSNIIQLTTPEELISVSTTTEQEKTEWIHAFNTTIRLRLNKDSSFKPPSIRSACY
TFSNKVPFYKEATYTGRWLDGKTHGNGKAEWPDGKHYVGQFQLNALCGHGKMEIPGVGIY
EGQWKDNLQNGYGVLKYTTGDIYEGYFKDGLPHGHGIKKQGDFTTSTATIYTGEWVNGAR
QGYGVMDDIGKGEKYLGNWSDNKKHGCGLIVTLDGIYYEGLFMQDVLTGHGVMVFEDGTH
YEGEFRSAGVFSGKGVLTFSSGDKIEGSLCGAWTEGVKISNATMQLNVSNPAPPANSKPN
SFGKLSVASNQKWNALFRQCFQCLGVTETILTPTGNHFANGPVATIDNVKIWQKVAVAIS
CSHKDKHKTPLKKPKGCDMEKSVDCLEVIPHFGQKNLDLDSYFELKQYLQNACESTHHPL
GQLVLALTNAFNTTYGGVRVHPLLLSHAVKELKSITTRLYQVVRLLFPALPPEGTDVVLP
YKTDEGNVDSNPIDGEVVSAASLLQPTLLPRVHPALFVLYALHNKREDDLYWRRLMKWNR
QPDLTLMAFLGIDQKFWIGYNTRNSQMSPPYSPLKEQLFQEAVETLQQLKTTFSPIEKLL
VIRSTFQKMTTAVQQELGQNYLWSMDELFPVFHFVVVRARILQLGSEIHFVEDFLEPGMQ
HGELGLMFTTLKACYFQILQEKMSMN
NT seq
4761 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaacataaattttggaaaggtttaacaccgttggaaattaattcttcatcacaa
gtacctgaaaaaattgtgaagttatgttcccttgggtctgatttcattgtgctgggaaac
gaccatggactgtaccactgtgacattgaagaaggccgcttgggttttagcagaataaac
ggaatttcagcaatagacatatcatatcacaatgaaattctttacataattgatatacat
ggccgcctgtacaaaacaaacaatagctttaaaaacaaagaagaaatcgtagttaaggaa
gatgcgaaatgttgtccccacggcttcaagagctctagctataaagtgaagttcagaaat
gtagtgtcaagtgattttggacaactttttattagtagtgatgggcaactgtggggatca
ggagttatgccccaaatatccttagatacgagtagtattaaaaaagtgccattttttgaa
gggaggactgtgtatagtgcttcagtgggacaaaactttgcagcagtgattgctaggaag
aatgttaaacggtcaggtaactacgatacagaaagtgacaatgatgatgaggaagtgttt
gcttcaaactgctcacaatgtcagacaataataggcttggcatccccagcatctgtgccg
tccttgtcagaaacctgtcccctcggggtccaaattagcaggtccagtgaggactccagt
agtactactgccccacaaactgatgtacatgttgatgctcacagcttaactgaggactct
agtccatcaactgaagtatcaaaggtacagaatgatgttacaaataatcctgttgtagaa
ataaaaagccaccaagatggtacagttgaagaagatgatagtacagaggcagaaacagaa
acacacctaaataatgaaaagattaacaacatattcatcaacactgatgcagcccggcag
tttctgagcagacaactctcatgggtgtctgctggagaagattacttagtggaatgcaca
gaaaaacctacaagaataataaaagaaaatgtctcaaatctcaccaacttagtttatgaa
ggcgtaaggacagtgggagacaaggttgccacactgtcccgccatgtgagtggcagcagt
gacaacaatgaggttgtagagctacaaattagaataaacaatgaagacctcatgcacagc
tgcacttcaaattgcaacttagatgatttgcatatctcaacaagtacaataagcagtgat
aaacaattggaagcatgcaggaaaaatgagaatgttaaaaatatggctaaacttggtaaa
aatatccttgctacagaactgtggacttggggagacatatcttatggacaattaggcatt
ggtgatacagttaaaagaataaaacctatggtggtgatgactttgtcaggatttggactc
cagaaggtttcttgtgggaattggcattgttcagctttaactttagatgggcgtctattt
atttggggtaacaatcattaccatcaagtaagttttgattctagagaagacaaaagtggt
cctaaacagtttactgagaactctgatagtgatagagtgagagacatgattgctactgag
catcacactctggcctatacccacaatgaaaacatattttacatgggcaagcacacggat
ggatacactgaatccatagtaaatttaaaccaaaaggcagaggaagaagtaactgagaat
gggaaggatttaacaatgaaaattttagatctccaaattcccagtaaacctcaaaatatg
tgctatcattggagaatattgtcttcaggcaatatcagttactgttcagtagaagaagtc
acaaaaagcccagaatttcaagatctgtctattgctcaaagatatctagaagaaatgcta
ttgatatatcattcccttatcaaaccatttctcaagaaaagcaaatccattacattacat
tccaatatttacgaaaccgtttgtgataattttggtgacattttaaatataacggctctc
aatgtgttgtcaatatggcagtatgctgagaagcatataaacgaatgtgatatttcttta
atcaaaaatttagaagagtatatttatttgtacagaaagtattatgtagctgtaagtaat
ttaattgttgttggtggtttctcacagatcaacaatattgttgatgtcccgtctactatt
tatagtttgtttagtgatcaactgccatcaaataaacagaaaaacaacaagaaaaccttg
gaagccatagtagcattagctttcgtacaaccattaactagattgagttcatacaaatgc
atagctcaatcactgttacgttataaaactaagaggaaaaaaggtgatgctcaaacaaac
attgaagaaagattgagtaaagttgtgtcatcattagatacattgatagaggagcaagaa
aagaaacgtaaagaggcagaaatcacgaaactattttgggaaacaacaggaaagtctctt
gatcagtataaaactcctgaacgcagactggtcagagaatcaaaatctcgtgcactgaat
ttggtcaatccagggagattctcatcacattggtttgttctattcaatgatctatttgtc
cgtgtaaatgggagcacaccaaacttacaccctttagagacactatgggttgaatcagtc
ccaaatacagattctctgtctaatattattcaactaacaactcctgaggaactaatttca
gtatccactaccacagaacaagagaaaactgaatggattcatgcattcaataccactata
aggttgagattgaataaagactcttcattcaaacctccttcgattcgttctgcttgttat
acgttttcaaataaagtacccttctataaggaagcgacgtatactggaaggtggttggac
gggaagactcatggaaatgggaaagctgaatggcctgatggcaagcattacgtggggcag
ttccagctgaacgcgttatgcggccatggcaagatggagatacctggagtaggcatatac
gaaggccaatggaaggacaacttgcaaaacggttatggggtcctaaaatacacgaccggc
gacatatatgagggatatttcaaggacggtttaccccacggccacgggataaaaaagcag
ggagatttcaccacttcgacagcaactatttacaccggagaatgggtaaatggtgccagg
caagggtacggcgtgatggatgacattgggaagggtgaaaaatacctcgggaactggagt
gataataagaagcatggatgcggcctgattgtgaccttggacgggatttactatgaaggt
cttttcatgcaagacgtgcttacgggacacggcgtaatggtcttcgaagatggcactcac
tacgagggcgagttcaggtccgccggcgtgttctccggcaaaggcgtgttgactttctca
agcggggacaagatcgaggggtctttgtgtggagcctggactgagggggtgaagatcagc
aacgccaccatgcagctgaacgtgtccaatcccgcaccgccagcgaattctaagcctaat
tcattcggcaaactgagcgtcgcgtcaaatcagaaatggaacgccctgttccgccaatgc
ttccaatgtctcggcgttacggaaacaatattaacgccaaccggaaaccacttcgctaac
ggccctgttgcgaccatagacaacgttaaaatttggcagaaagtagctgtggccatttcc
tgttcgcataaagataaacacaagactcccttgaagaaacccaaaggttgtgatatggag
aagtcagttgattgcctggaggtgataccccattttggacagaagaacctggatttggac
agctattttgagttgaaacagtatttgcagaacgcttgcgagtccacgcatcacccgcta
ggccagctggtcctggctctcaccaacgctttcaacaccacttacggcggggtcagagtc
cacccattactccttagccatgctgtcaaggagttaaagagcatcaccacccgtttgtac
caagtggtccgtttgttgttccccgctctgccaccagagggcactgatgtggtgttgccg
tataaaactgacgagggaaatgtggacagcaatcctattgatggtgaggtggtatcagca
gcttcattgctccaaccgaccctactaccgcgcgtgcatccggctttgttcgtgttatac
gcgttacacaataagagggaagacgatttgtactggagacgactcatgaagtggaacaga
caaccggacctcacgctgatggcgttcttaggaatagaccaaaaattctggatcggttac
aatacccggaactctcaaatgtctcctccgtactcgccgctcaaagagcaactgttccaa
gaagccgtcgaaactctacagcagctgaagactacgttctcaccgatagagaaacttctt
gtaattcgtagcacattccagaagatgacgacggctgtgcaacaggaattgggtcagaac
tacctttggagcatggacgagttgttccccgtgttccatttcgtggtggtccgcgctcgc
atcctccagctgggttcagaaatacacttcgttgaggatttcctggagccgggcatgcaa
cacggggaactgggacttatgtttactacacttaaggcctgttactttcaaatactccaa
gaaaagatgtcgatgaactaa
DBGET
integrated database retrieval system
