Amyelois transitella (navel orangeworm): 106143193
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Entry
106143193 CDS
T09957
Name
(RefSeq) zinc finger protein ush isoform X1
KO
K17441
zinc finger protein ZFPM1
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atra03000
]
106143193
Transcription factors [BR:
atra03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
106143193
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CCHC_ZFPM2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-met
zf-C2H2_REST
zf-C2H2_jaz
zf-C2H2_3rep
zf-C2H2_7th_ZNF462
zf-C2HE
Zf-C2H2_ZNF451_C
Motif
Other DBs
NCBI-GeneID:
106143193
NCBI-ProteinID:
XP_013200668
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All DBs
Position
2:complement(join(1748925..1749332,1749799..1751711,1833251..1833338))
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AA seq
802 aa
AA seq
DB search
MLLWLSYLKQLELACAELPPGGAADAKTMCEDEEWGNETEAMPGEPRTPSSGGEIVASSG
GASPASGGSPEASPPRLRLNTSLATDPALAPQAAPLKHEPPSPSPPPPPAATLPQARDYL
ALTASFPALFPTAAPGYICKPCGIRYSSLSTLQAHQEHYCSNRNRPKTADGTDATTDPGA
IDESSSEAKTPRPPGSKQYACTYCSYSADKKVSLNRHMRMHSSSPVSSGTPAPTPALNGN
ESNDGAPIQDRYCADCDIRFSSIKTYRAHKQHYCSTRQVVKQALAIARGGSATSGSAPPS
PGATPPAQNQYALALPTNPILIVPYSLLRSASTLPGATLPDPDTPCFLLPNGTFQPISRA
LPTLNADSKESEVLKSANRPREPSRDAATPLDLSVRRSPESATTDEHEKENRIRSATPEQ
IVCAPSLPASPATPSPSRRSSSPNGESSPKRRRLSSRGPTPKPPNVPSPPEEKFSQTVPA
PILPLALRLATELPVTVTATSPQVIVKQGVSKCKECNIVFCKYENYRIHKRHYCSAGGGE
ERASPAPPEPGPPPQYRQLICLACGIHFSSLDNLTTHQSYYCTKRETRSPRSMPEVPRPA
SASEGGWKCPCCDVVSPTAAAAQRHMEAHAGVKAFRCTICRYRGNTLRGMRTHIRMHFNN
KKPADLQEESYIACVLEEDNRETTSPSPAVGGERIHRCGSCAYTSTYRGNVVRHGRLVHA
IDEPEQEEQTSPVPVVDIKKEPEAEVEETPNYCKSCDISFKYVNTYKAHKQFYCTANNQD
ASANNNVPAPPPTARVNDTPVL
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgttattgtggttgagttatctgaaacagctggaattggcgtgcgcggagctgccgcca
ggtggcgcggcggacgccaaaacaatgtgtgaggacgaggaatggggaaacgagaccgaa
gcgatgccgggagaacctcgcacgccgagctcaggaggcgagatagtcgcgtccagcggt
ggcgcgtcgccagcatctgggggctcccctgaagcttcgccgcctcgattacgtcttaac
acaagtctggcgacagacccggctttggcaccccaagcagcaccactgaaacatgaacct
ccgtcgccatcaccgccgcctcccccagccgcaactttgccacaagcaagagactacctt
gcgttaacggccagctttccagctctgttcccaacagctgctcctggttatatctgcaaa
ccttgcggcattagatactcgtccctcagtacgctacaagcgcaccaagaacactattgt
tccaatagaaatagacctaaaacagctgatggtactgatgcaactactgatccgggcgca
atagatgaatctagtagcgaagcaaagacgccccgaccaccaggcagtaaacaatatgcc
tgtacatattgttcgtacagcgctgataagaaagttagtttgaatcgtcatatgcggatg
cattcatcgtcacctgtgagcagcggaacgccggcgccaacgccagctttaaatggaaat
gaatctaatgacggcgcaccgattcaggatcggtactgcgcagattgcgatatacgcttc
agttcaataaagacgtaccgggcgcataagcagcactattgcagcacgagacaagtcgtc
aaacaagcattagctattgctagaggcggctcagcaacttcagggtccgcgccaccttct
ccaggcgctacaccacccgcccaaaatcaatatgcgctcgctttaccaaccaatccgata
ctaattgtaccatattcactactcagaagtgcgagcacattaccaggcgccactttacca
gaccctgacacgccgtgttttctattgccgaacggaacattccaacctattagccgagca
ttgccgactttaaacgcagatagtaaggaaagtgaggtattgaaatcggcaaacagacct
cgtgaaccatccagggacgccgccaccccgctagatctaagcgtacgtcgctcacctgag
tcggcaacaactgacgaacacgaaaaagaaaatagaatacgatcagccacgcctgaacag
atcgtttgcgctccgtcattaccggcctcgcccgctacaccatcgccttcccgaaggtct
tcctcgccaaacggagagagttccccaaagcgacgacggctaagttccaggggacctaca
ccaaaaccaccaaacgttccatcaccaccagaggagaaattttcgcaaactgttccagca
ccaattttaccattagcattacggctcgcgacagaactgccggtgactgtcacagccacc
tcacctcaggtcatagtcaaacaaggagtctcgaaatgcaaagaatgcaatattgtgttc
tgcaaatatgaaaattaccgtattcataagcgacattactgttctgccggagggggtgag
gagcgagcgagtcctgcgccaccagagcctgggccgccgccgcagtatcgtcagttgatc
tgtttagcgtgtggtatacacttcagttcgttggacaacttgaccactcatcagtcgtat
tactgtacgaagagggaaactagatctcctagaagtatgccagaggtaccgcggccggca
tcagcgtccgagggtggttggaagtgcccgtgctgtgacgtggtgtcgcccacggctgct
gcagcccaaaggcacatggaagcccacgcaggcgtgaaagcattccgctgtacgatctgc
cggtacaggggcaacacgcttcggggaatgcggacgcatatccgcatgcatttcaataat
aagaaaccagctgatttgcaggaagagagctacatagcatgcgtgctagaagaagacaac
cgggagaccacttctccaagcccagcggtgggcggcgaacgcatccatcgctgtgggagt
tgtgcctacacttccacctacaggggcaatgtcgtcagacatggccgcttggtccacgcc
atcgacgaacccgagcaagaagaacagacctcgcctgtgcctgtcgtcgatattaaaaaa
gaaccagaggcagaggttgaagaaacccccaactactgcaagtcctgtgacatatcgttc
aaatacgtgaacacttacaaagcacacaagcaattctactgcacggcaaacaaccaagat
gccagtgccaataataacgtgccagcaccaccgcctaccgcgcgcgtcaacgacactcct
gtgctatga
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