KEGG   Amyelois transitella (navel orangeworm): 106143437
Entry
106143437         CDS       T09957                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
  KO
K20179  vacuolar protein sorting-associated protein 11
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra04140  Autophagy - animal
atra04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:atra00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    106143437
   04148 Efferocytosis
    106143437
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:atra04131]
    106143437
Membrane trafficking [BR:atra04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    106143437
   Hops complex
    106143437
SSDB
Motif
Pfam: PEP5_VPS11_N TPR_PEP5_VPS11 VPS11_N ANAPC4_WD40 VPS11_C zf-C3H2C3 Beta-prop_EML_2 Beta-prop_WDR3_1st zf-rbx1 Beta-prop_pof12 NPF zf-C3HC4_2 zf-RING_2 Beta-prop_HPS5 zf_RING_Vps8_fungal TPR_11 Mut7-C
Other DBs
NCBI-GeneID: 106143437
NCBI-ProteinID: XP_060804733
LinkDB
Position
17:join(2914324..2914338,2914578..2914646,2914767..2914940,2915527..2915679,2916103..2916233,2916881..2917031,2917974..2918405,2918997..2919272,2919659..2919878,2920191..2920413,2920989..2921147,2921876..2922033,2922749..2922830,2923513..2923728,2925570..2925698,2927951..2928138,2928602..2928789,2929395..2929592)
AA seq 1053 aa
MAFLEWRKFTFFDIHNNVDSGKVAECLQDTHVTVSTSGNGHVILGDVTGWAHLITRCWEV
TSFKAYELTISLAQQLPHDPFLVTIGDDEAGVNPMIKVWDWSRTDRHGNPKCVRVCRVVP
SHMHPTPATALAVHENKNLIAVGFQDGSVSIFRGNIARQRSAEMKTLPDTGSSQITGLAF
KGADKLFIVSRGSVRAQSLGAERGVTLEARGAPPHCCALADSHGLTVAIDNAIYCYTAEG
RGPCYALEGEKVRLNWFRSYLVITINETAPRSNEPSSSNAKSHRITILDIQNKFIVFSKT
FDQIDAVLTEWGSFYILTKNKEMIYLEEKDLQSKLSLLFKKNLYDVAIRIASSQHYDVEG
FTEINKQYGDHLYSKGDLKSAIEQYIKTIGRLETSYVIRKYLEARDLEPLVLYLEELHKK
GYATEDHTTLLLTCYVKIDQHDQQGKLKEFINSKDRAIDFDVDVAIKVVRQVSVDDALSL
ATNNKRHDWYLQIMIEDKKDYSRALDYMVELEFEDAETYMKKYGHTLIQHEPVESTKFLK
LLCTDYKPRSKPLVDENSLSGGQREINRALPDDFIHMFLSNSEKLVDFLEHMIASEFRCS
KLVYNALIEHYIHVWGKVTENEKLEYEQKVLKVLKDPEANYDKDHTLIICQMLGFKAGIL
YLYEENKLWRAQVALHLRSNNAEAALAVCRRRGAGCPRLWLDVLWWPPPPAALPELLNVI
DNEKLLSPILVIDCLASTPTYTLGDVRKYLMSVLKSENDVITREQELAQKYKTESERMKQ
EIQTLQHEPVTFQSSRCAACNRPLELPTVHFFCQHSYHQHCFQSFSECESECPACAPSRG
RGEQPPPARAEALHARLHNDHDPYAVVSEYYGRGLFNKLTLVSSVAPEPAPAQPPPPPAL
AAPPGRTYGPGAEANIRLQEGQSTQVFVSNSARQVVPKGTAIVPIPEGRMRVIEQQRYSS
SLEANLNTLQPRVHLPQRSQGQGQQQIKIEEAVSAGGSPKISAAINNVGKNPFEEEYDES
KNPFAEDDDVITDPTNPFAEEADDYDKNLNPFS
NT seq 3162 nt   +upstreamnt  +downstreamnt
atggcgtttttggagtggcgaaagtttactttctttgatatccacaataacgtcgacagc
ggcaaagtagcagaatgtcttcaggacacacatgtgactgtatcgacaagtggcaacggc
catgtaatactgggtgatgtgacaggttgggcgcaccttataactcgctgttgggaagtc
acctcgttcaaggcttatgagctgactatatcattagcccagcaacttccacatgatcct
tttttggtgacaatcggtgatgacgaggctggagttaaccctatgatcaaagtatgggac
tggtcccgcacagatcgccatggcaaccccaaatgtgtgcgtgtctgccgggtagtgccc
tcacacatgcaccctacacccgccactgcattggctgttcatgaaaataagaatcttata
gcagttggatttcaagacgggtccgtgtctatatttcgcgggaacatagcgaggcagcgg
agtgcagaaatgaaaaccttgcctgacactgggagcagtcagataactggacttgcattc
aagggcgcggacaagctgttcatagtgtcccggggcagcgtgcgcgcgcagtcgctgggc
gcggagcgcggcgtgacgctggaggcgcgcggcgcgccgccgcactgctgcgcgctcgcc
gactcgcacggcctcaccgtcgccatagacaacgcaatttattgttataccgctgaagga
agaggcccttgctacgctctagaaggcgagaaggtccgcttaaactggttccgttcctac
ctcgtcataactatcaacgagactgcaccaagatctaatgagccctcgagttctaatgct
aaatctcatagaatcacaatactcgatatacaaaacaaattcatagttttctccaaaact
ttcgaccaaatcgacgcggttttgacagaatggggctctttttatatactcactaagaat
aaagaaatgatttatttggaggagaaggatttgcagtcgaaattgtccttgttgttcaag
aagaatttgtatgacgtcgctataaggatagcgagcagtcagcattacgatgtggaaggg
ttcacggagatcaataagcagtatggtgatcatttgtatagcaagggcgatctcaaaagc
gcaatagagcaatacattaaaactataggtcgtctagagacctcttatgtcatccgcaaa
tacctagaagccagggacctagagcccttggtcctctacctggaagagttgcacaagaag
gggtatgcgacggaagaccatacgactttactactgacatgctatgtgaagatagaccag
cacgatcagcaagggaaactgaaagagttcattaattctaaggatagagctattgacttc
gatgtagatgtggctatcaaggtagtccgtcaagtgagcgtggacgatgcactgtctcta
gccacgaacaacaaacgtcacgactggtacctccagattatgatagaggacaagaaggac
tacagccgagccctggactacatggtcgaactagagtttgaggacgctgagacgtacatg
aagaagtacggccacacgttgatacagcacgagccggttgagagtaccaagttcttgaaa
ttactatgcacagactacaaaccacgtagcaagcctttggtcgacgagaattccctatca
ggcgggcagagagaaattaaccgagccttaccagacgacttcatacacatgtttctcagt
aactccgagaaactagtggattttctcgagcacatgatagcttcggagttcagatgctca
aagttggtgtacaacgcgctgatagaacattatatacatgtgtggggcaaagttactgag
aacgagaagttggagtacgagcagaaagtgttgaaagttctcaaagaccccgaagccaac
tacgataaagatcatacacttatcatctgccagatgctgggcttcaaggcgggcatactg
tatctttatgaggagaataagctatggcgagcgcaagtggccctccatctgcgaagtaac
aacgcggaggcggccctggctgtgtgtcgtcggcgaggcgctggttgcccgcgactttgg
ctagacgtgctgtggtggccgccgccgcccgccgcgctgccggaactgttgaacgttatc
gacaacgaaaagctgctctcgccgatcctggtcatagactgtctggctagcacgcccacc
tacactctcggagacgtcagaaaatacttgatgagcgtcttaaaaagcgagaatgacgtc
atcacgcgcgaacaagaactcgcgcagaaatacaaaacggagagtgagaggatgaagcag
gagatccagacgttgcagcacgagcccgtcaccttccagagttcccgctgcgccgcgtgc
aacaggccgctagagctgcccactgtgcacttcttctgccagcattcctaccaccagcac
tgtttccagagtttctcggagtgcgagagcgagtgccccgcgtgcgcgccgtcccgcggc
cgcggcgagcagccgccgcccgcgcgggcggaggctctgcacgcgagactacacaacgat
cacgacccctatgcagtagtatccgaatactatggtcggggtctattcaacaagctgacg
ttagtgtcgagtgtcgcgcccgagcctgcgccggcgcagcccccgccgccgcccgcgctg
gcggcgccgcccggcaggacgtacggcccgggggcggaggctaacatacggctacaggag
ggacagagcacgcaagtgttcgtctccaactcggcacgacaagtcgttcccaaagggaca
gcaatagttccgattcctgaaggtcgaatgagggtcatagaacaacaacgatacagctcc
agcctcgaggccaatctaaacacgctgcagccgcgggtgcacctgccccagaggtcacag
ggtcaaggtcaacagcagattaagattgaagaagcggtcagcgccggcggctcgcccaag
atatccgccgccatcaacaatgtcggcaaaaatcctttcgaagaggaatacgatgagtcc
aagaatccgttcgcggaagacgatgacgtcatcacggaccccaccaacccgttcgcggag
gaggctgacgattacgacaagaatttgaatcctttctcgtga

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