Amyelois transitella (navel orangeworm): 106143629
Help
Entry
106143629 CDS
T09957
Name
(RefSeq) GATOR complex protein WDR59 isoform X1
KO
K20409
SEA/GATOR complex protein SEA3/WDR59
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
106143629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atra04131
]
106143629
Membrane trafficking [BR:
atra04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
106143629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
WD40
zf-RING_16
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR75_1st
WDR55
EIF3I
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_WDR19_1st
Beta-prop_WDR36-Utp21_1st
MIOS_WD40
WD40_RFWD3
zinc_ribbon_16
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
106143629
NCBI-ProteinID:
XP_013201212
LinkDB
All DBs
Position
2:join(9841730..9841978,9842141..9842348,9842424..9843017,9843367..9843440,9843748..9844086,9845064..9845435,9845863..9846016,9846250..9846433,9846778..9846898,9847113..9847367,9847579..9847802,9848061..9848151)
Genome browser
AA seq
954 aa
AA seq
DB search
MSVHWSSELMKWEYRELQATAMSVDFSGNNVLLAGRRWLAIKQISLEDDGGDIVKKYPRH
SKYDAAGAEWCQTYHGQKLCAIASNQRVDVYEWRAGNDLTCICSLRGHTRVVSDTHFHRQ
DHNLIATCSIDTFTHLWDLRDSRKPVVSLSAVAGASQVQWNKVATHVVATAHDGDIKIWD
YRKNTSPIHYISAHLCKIHGVDWSPHHEYQLVTSSHDGSIKYFDINNGRRPENIIMTNFP
VWRAIYTPFGSGLLTIGVGWGGLPRAEQAGVIGIWVGGSLTQRLVGHTDTVQTMVWRPNT
SPSNYQLVTWGRDQTLRLWTMHPSLLKMCNHYLPDDDDNDDGNNSDCKLKSTSYSSIIGS
MNDVSLDNKGQDIQMNKLSHKSPTSIDEEFESIREMANIEVTHMNIDTRTCQIHSERNGY
TANLQVVFPRNVTEQTIPKFSWLTGTNVDSATTIKILQALNKTAYKKKKEGHRCLLHCLK
TLATSIDEIPVKSSDDTDSMKSSQRSQSESENAGDACIPFPRTCGAKWCGVSTLVVFNRP
PNARRLSLKHETGTPRSMSSLSLAPTIFGTGYSSVSPHATTTPSPTNASGFPQLHHRHAS
NSITTFYFQDRWKAQGRRAGSMRSRGSISGCGAPRVLLYSAADLFPLRRSLAEKYVIDAE
DPVVMCEKNAKIAMEEEECELSQAWELTALVARSLRSRVVDHLASSEETMGWVGHPLCCN
LLQSLITHYAKSSDLQMAAMLACAFSVFNDASNSSSQSTISTSSCGNGTSPYSTVNQYSE
ISADGWTLPIVLRSNSCSEAENFYTDSTISKSERTTACVLDEATVHLYHCFKRVYADILF
RWQLIYKKTEVLKLVQCKSSGAAAWSGPTLCAECARCGRACGGAVCAACGELALRCAVCA
LGVRGLAAACAACGHAGHASHMIHWFTTRDTCPTGCGCKCSIEGNNVWKGSKYV
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtccattggagttctgaattgatgaaatgggagtatcgcgaacttcaagctaca
gcgatgtccgtggatttctcaggaaacaatgtgctattagcaggcaggagatggttggcc
atcaaacaaatcagcttagaagatgacggtggggacatagtaaaaaagtatccgcggcat
agcaagtatgacgctgctggggcagaatggtgccagacatatcatggacaaaagctctgt
gccattgcgagcaaccagagagttgatgtttacgagtggcgtgctggaaatgacttgacc
tgtatatgctcccttcgtgggcacacacgtgttgtcagtgacacccacttccatagacag
gaccataatttgatagctacctgctccatcgatacctttactcatttgtgggatttaaga
gattctagaaaaccggttgtatccctatctgcagttgctggtgcatcacaagtgcagtgg
aataaagtggctactcatgttgtagccactgcacatgatggtgatatcaaaatttgggac
taccgtaaaaacacatcacccatccactacatatcggcacacctttgtaagatacatgga
gttgattggagtccccaccatgagtaccaactagttacttctagtcatgatggaagcatt
aaatactttgatataaacaatggaagacgtccagaaaatattataatgacaaatttccct
gtatggagagctatttatactccttttggtagcggtttattaactattggtgtaggctgg
ggcggcttgccaagggctgagcaagcgggagtgattggtatatgggtgggaggctccttg
acacaaagattagttggtcacacagatactgtacagaccatggtgtggagacctaacact
tcaccatctaattaccaattagtcacatggggccgagaccagacattacggctatggacc
atgcatccatcactactgaagatgtgtaatcattacctgccagatgatgatgacaatgat
gatggaaacaatagtgactgtaagttaaaatcaacaagctattcatctataattggttca
atgaatgatgtctcgctggataacaaaggtcaagacattcaaatgaacaagctttctcac
aaatcccccacatcaatagatgaagaatttgaatcaattcgtgaaatggccaacattgaa
gtgacacacatgaacatcgacactcggacttgtcagatacactctgaacgcaatgggtac
acagctaatctgcaagtggttttcccaagaaatgttactgaacaaaccataccgaaattc
tcttggctcacaggcacaaatgttgatagcgcaaccactataaaaattcttcaggccctt
aataaaactgcttacaaaaagaagaaagagggacatagatgtttgttgcattgcttgaag
acactggcaacatctattgatgagatccctgttaagtcaagtgacgacacggactctatg
aaatctagccaaagaagtcaatcggaaagcgaaaacgcgggagatgcatgcatcccattc
ccgcgcacatgtggagctaaatggtgcggagtgagcacactagtcgtattcaaccgaccg
ccaaacgctagacggttatctttaaaacacgagactgggacgcctcgctcaatgtcttcg
ttatcattagcgccgacgatcttcggcactggatatagctctgtttcgcctcatgccacc
acgactccttcgccgacaaatgcatctggctttccgcagttgcatcatagacatgcttcc
aattcgataacaaccttctacttccaggacagatggaaagcgcaaggtcgccgcgccggt
agcatgcgcagtcgcggcagcatctccggctgcggcgcgccgcgcgtgctgctgtactcc
gccgctgatctgttcccactgagacgctccctcgctgaaaagtatgtcatcgacgcagaa
gatcccgtggttatgtgcgagaagaacgccaaaatagcaatggaggaagaggagtgcgag
ttatctcaagcatgggagctgaccgcactggtggcccggtcgctgcgatcgagagtggtg
gaccacttggcctccagcgaggaaaccatgggctgggtgggccatccgctgtgctgcaac
ctgctgcagtcattaattacccactacgccaaaagttcagatctgcaaatggcagctatg
ttggcatgtgccttttctgtattcaacgacgctagtaattcaagttcgcagtctacaatc
agcacttctagttgtggtaacggcacctcaccctacagcactgtaaaccaatacagcgag
atcagcgccgacggctggacgctccccattgtattacgaagcaattcctgttccgaagcg
gagaacttttatacagactccaccatttctaaatcagaaagaacgaccgcttgcgtgctg
gacgaagcgactgttcatttgtatcattgcttcaagagagtctatgctgatattttgttt
agatggcagttaatatataaaaagactgaggtgttaaaactagtgcagtgcaagtcgtcc
ggcgcggccgcgtggtcgggcccgacgctgtgcgcggagtgcgcgcgctgcgggcgcgcg
tgcggcggcgccgtgtgcgcggcgtgcggcgagctggcgctgcgctgcgccgtgtgcgcg
ctcggcgtgcgcgggctggccgccgcgtgcgccgcctgcggccatgcgggccacgccagc
cacatgatacactggttcacgacacgagacacgtgccccacgggctgtggctgcaagtgc
agcatcgaaggcaacaacgtgtggaagggatccaagtacgtgtga
DBGET
integrated database retrieval system