Amyelois transitella (navel orangeworm): 106143653
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Entry
106143653 CDS
T09957
Name
(RefSeq) SOX domain-containing protein dichaete-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atra03000
]
106143653
Transcription factors [BR:
atra03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
106143653
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
106143653
NCBI-ProteinID:
XP_013201239
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All DBs
Position
2:complement(12581228..12581965)
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AA seq
245 aa
AA seq
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MSTLSHHPYAFSMHPGMMPEYTSAPQPLPASSPQSEGHIKRPMNAFMVWSRLQRRQIAKD
NPKMHNSEISKRLGAEWKLLSEIQKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKPPTPG
GPPGAGAFHSFPLPYFAGPAPSVGHLDALSYPAVPPYFPHQLDHLQFSKLMAPSAEKLPT
VSSSAAAVVSSFYSSLYTSPAAPPKPFSSALFPQYGGPSSPVSPVTPTQHSPHDDQLRRP
VSVIY
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactttgagtcatcacccgtacgcgttctccatgcaccctggcatgatgccggag
tacaccagcgcaccgcagccgctacccgcgtcttctcctcaatccgaggggcacataaag
aggccgatgaacgcgttcatggtctggtcgagactccagaggcgtcagatcgcaaaggac
aatccgaagatgcacaactccgagatctccaagagattgggcgccgaatggaagctgtta
tcggaaatacagaaacgtccgttcatcgatgaagcgaaacggctgagagcattgcacatg
aaagagcatccggactacaagtatcgcccgcgcaggaagccgaagccgccaacgccggga
ggtcccccgggagctggtgctttccacagcttcccgcttccatacttcgccggtcccgca
ccgtcagttggccatttggatgctctgtcttaccctgctgtgccaccatacttcccgcac
cagttggatcacctgcagttttccaaattgatggccccgtcggctgagaagttgccgacg
gtgtcgtcgtccgctgcggcggtcgtatcttcgttctactcatctctgtacacgtcgccg
gcggcaccgccgaagccgttctcgtcagccctgttcccacaatatggaggaccatcatca
ccagtgtctccagtgacgccgacccagcatagcccacacgacgaccagctaaggcggccc
gtctctgtcatatattga
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