KEGG   Amyelois transitella (navel orangeworm): 132903760
Entry
132903760         CDS       T09957                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC4
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra03020  RNA polymerase
atra03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    132903760
  09124 Replication and repair
   03420 Nucleotide excision repair
    132903760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:atra03021]
    132903760
   03400 DNA repair and recombination proteins [BR:atra03400]
    132903760
Transcription machinery [BR:atra03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     132903760
  RNA polymerase III system
   RNA polymerase III
     132903760
  RNA polymerase I system
   RNA polymerase I
     132903760
DNA repair and recombination proteins [BR:atra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      132903760
SSDB
Motif
Pfam: Zn_ribbon_RPAB4 MCM_OB A2L_zn_ribbon Cytochrome_C7 DmmA-like_C Zn_ribbon_13 DUF5816 HypA
Other DBs
NCBI-GeneID: 132903760
NCBI-ProteinID: XP_060808762
LinkDB
Position
3:join(8618678..8618735,8619500..8619592,8621381..8621403)
AA seq 57 aa
MADTSKDQSVTKIMIYVCGECHKENEIKPKDPIRCRECGYRIMYKKRTKRLVVFDAR
NT seq 174 nt   +upstreamnt  +downstreamnt
atggccgatacaagtaaagaccagtcagttaccaaaattatgatttatgtatgtggagaa
tgtcataaagaaaatgaaataaaaccaaaagacccaatcagatgtagagaatgtggatat
agaatcatgtataagaagcggactaagagattggttgtttttgatgctcgctga

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