Amyelois transitella (navel orangeworm): 132904226
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Entry
132904226 CDS
T09957
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
atra01009
]
132904226
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atra03021
]
132904226
Enzymes [BR:
atra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
132904226
Protein phosphatases and associated proteins [BR:
atra01009
]
HAD phosphatases
Fcp/Scp phosphatases
132904226
Transcription machinery [BR:
atra03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
132904226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
132904226
NCBI-ProteinID:
XP_060810127
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All DBs
Position
4:1393108..1394541
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AA seq
477 aa
AA seq
DB search
MDTKNVRMKKKPCKIEEMTKEQIREAIVKKRVCNAKAQTIVESLLEKVVSESYFLQCLPD
INQSHFEDVIEERAIIHLCGYPLCQTALSEKDIPKQKYRISMKTNKVYDITARKSFCSNS
CYRAATFVKKQMLTSPLWFREYEEIPAFHLLPSDTVGSLGLEVDVSIIEKIEVKSDKSQF
SSINDFATASLNEMTDTGNELTNIEAKEIVKNVNDCENNNSSSSSVKHNQSLNINSVESQ
QDTQSNVSNQSNKEFTKRVQRKHNPLNIVGDIIEKPEKKIDPILAQKPDNIPKAQSKPKN
VIKKCQPAVTVLTIEVEKRLAEWFTLDTLLLLFGEEKVREMVADKGECIKEYLNNYANSI
AYNANTYDQYQALCRKLNMLELEDRQFDAQTLQRELKPLPDYSMLQEESKKMQLKVRAYF
AGEMTIPDVSQEEQDTTPAEEESRPRHLPLVDKNAQNALRRRIVCEHLLFFALSYFE
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggatacaaaaaatgttagaatgaagaaaaagccgtgcaaaattgaagaaatgactaaa
gagcaaatacgtgaagcgattgtcaagaaacgagtatgcaacgcgaaagcgcaaaccatt
gttgaaagcctgttagagaaggtcgtatctgaatcatatttcttacaatgcttgccagac
atcaatcagagccacttcgaagatgttatagaagagagggctatcatccacctgtgcggt
tacccgttatgtcaaactgcactttcagaaaaagacatcccaaaacagaagtaccgaata
tcaatgaaaactaacaaggtttatgatatcacagctcggaaaagtttttgcagcaacagt
tgttacagagcggcgacatttgtgaaaaaacagatgttaacaagccccttgtggtttagg
gaatatgaagagatacctgccttccatctgcttccttctgatacagtgggcagcttgggc
ctagaagtggatgtatcaattatagagaaaattgaagtaaaatctgataagtctcaattt
tcttcaatcaatgattttgctactgccagcctcaatgaaatgactgatactggcaatgaa
ttaactaatattgaagctaaagaaattgtgaaaaatgttaatgattgtgaaaataataac
agtagttctagttctgtaaagcataatcaaagtttaaacattaattctgttgaatctcaa
caagatactcaaagtaatgttagcaatcagagtaataaagagttcacaaagagagttcaa
cgcaaacataacccactaaatatagttggcgacattatagaaaagccagagaaaaaaatt
gacccaatattggctcaaaagccagataacatccctaaagcccaaagcaaaccaaaaaat
gtaattaaaaagtgtcaaccggctgtcaccgtgttaacgattgaagtagaaaagcgcctt
gccgaatggttcactttagacacgttgcttctattgtttggagaagagaaagtcagagaa
atggtggctgataaaggagagtgcattaaagagtatttaaataattacgctaacagcata
gcgtacaatgcaaacacttatgaccaataccaagctctatgcaggaagctgaacatgctc
gaattagaagatagacaatttgatgctcagactttacaaagagaattaaaaccacttcca
gactattccatgttgcaagaggagagtaagaaaatgcagttgaaagtgagagcgtacttt
gctggggaaatgactattcctgatgtgagccaagaagaacaggatacgactcctgctgaa
gaagaaagtcgacctaggcatttgccacttgttgataaaaatgctcaaaatgcattgagg
agaaggattgtatgtgaacatttgttatttttcgccctttcttattttgaatag
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