Amyelois transitella (navel orangeworm): 132904319
Help
Entry
132904319 CDS
T09957
Name
(RefSeq) putative nuclease HARBI1
KO
K23222
nuclease HARBI1 [EC:3.1.-.-]
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
atra03036
]
132904319
Chromosome and associated proteins [BR:
atra03036
]
Eukaryotic type
Gene silencing
Transposable elements
132904319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DDE_Tnp_4
Plant_tran
Motif
Other DBs
NCBI-GeneID:
132904319
NCBI-ProteinID:
XP_060810228
LinkDB
All DBs
Position
W:join(11575064..11575612,11577786..11577908,11577990..11578171,11578250..11578382,11583659..11583791,11589772..11590190)
Genome browser
AA seq
512 aa
AA seq
DB search
MLPNATESLLGMNFIQDAGMVLDFSRGIWFMNHDRVSQPIVFEPNGGRSYKPLHCSSVDL
RDDEGFHLGKDERQQLSNLLNVNEDIFTPGGGPTQFAVHHIDTGDASALTRYVGKSPVIA
HQRHRGRLAKSQSGRPCNLEGEDIAGNIVGPSGETSRHPAPPSSIPRRSQRPRRGPPVRL
IEQLYNISIDTYRLSKNLLTKLCEEIRPMMNVAKRATNLSVETKVLTALSFFATGSYQRP
IGDIGGHSLAQQTVSKAIAQNSMEMREKYIVFPRSHEDRNKIRARFYQKFGIPGVLGCID
CTQIAIIRPTENEERYFCRKHYYSLNVQLICDADMQITSVDASFGGATHDSFIWNSHPIN
NNLENLDETTWLLGDSGYPLRQFLMTPVVNALPETPEGHYTNVHVRARNIIKRTIGLLKS
RFRCLLTHRVPHYKPQVAASIVNACVILHNICNKANLTAPELSDADSSQEAQMQPTNLAE
DTVSSSQNNQALQQGVAIRNDLIRRLWDVRRS
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgttgcccaatgctactgaaagtttgttgggaatgaattttattcaggacgctggcatg
gtattagatttttctcgcggtatatggtttatgaaccacgatagggtctctcagcccatc
gtctttgaacctaatggtggtaggtcatacaaacctttacattgctcgtctgtggatctt
cgcgacgatgaaggattccacttaggtaaggacgaacgacagcagctgtccaaccttctg
aatgtcaatgaggacattttcactccagggggaggacccactcagtttgctgttcaccac
attgataccggagatgccagcgccttaacgcgttacgtgggtaaatctcctgttattgcg
catcagcgccatcgcggtagactagccaagtcacagtcgggtcgaccatgtaacttggag
ggggaggatatagcgggcaacattgtaggcccttccggggagacatcgcgtcaccctgcg
cccccctcgtccataccacgccgttcccagcgcccgcgtcgaggaccgcccgtgcgcctc
attgaacaactttataatattagtatagatacctatcgactgtcaaaaaatttgctgacg
aaactttgtgaagagattcggcctatgatgaacgtcgctaaaagagctaccaatttatct
gtagagacaaaagttttaactgctttatctttttttgcaactggttcttaccagagacct
ataggtgatataggtgggcattccttggctcaacaaactgtttcaaaagcaattgctcag
aactccatggaaatgagagaaaaatatatagttttcccaagaagccatgaagaccgaaat
aaaataagggcaagattttatcaaaaatttggcattcctggtgttctagggtgcatagac
tgcacacaaatagctattataagacctacagaaaatgaagaacgatatttctgtagaaaa
cattactattcattgaatgttcagcttatttgtgatgcagatatgcaaataacaagcgtg
gatgctagttttggaggggccacacatgattccttcatatggaattcccatcccattaat
aataatttggaaaatttggatgaaacaacatggttattaggtgattctggctatccactg
aggcagtttcttatgacaccagtggtaaatgctctccctgaaactccggaaggccactac
actaatgtacatgttcgagccaggaatataattaagagaactattggccttctaaagtca
cgctttcgttgcctcttgacccacagagttccacactataaaccccaagttgctgcatct
attgttaatgcttgtgtcattttacacaatatttgtaataaagcaaatcttacagcacca
gaattgagtgatgcagacagctctcaagaagctcaaatgcagcctaccaatcttgctgaa
gatactgtgagtagcagccaaaacaaccaagcacttcaacagggtgtagctattcggaat
gatctcattcgtcgactgtgggatgtccggcgttcctga
DBGET
integrated database retrieval system
