Agelaius tricolor (tricolored blackbird): 139584959
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Entry
139584959 CDS
T10815
Name
(RefSeq) rho guanine nucleotide exchange factor 11-like isoform X1
KO
K12331
Rho guanine nucleotide exchange factor 11
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
139584959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atrc04131
]
139584959
Membrane trafficking [BR:
atrc04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
139584959
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
RGS
PH
Pept_S41_N_bact
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
139584959
NCBI-ProteinID:
XP_071273428
LinkDB
All DBs
Position
Unknown
AA seq
1702 aa
AA seq
DB search
MSVRPPQAPDRLSSLSSALGDSPAERRAPGPQRQPPDASASTGLVQRCVIIQRDQHGFGF
TVSGDRVVLVQSVRPGGAAMRAGVQEGDRILKVNGTMVTNSSHLEVVKLIKSGAYVALTL
LGSPPGPVGVPGPQQEPEPPGCAPGAPQRITEPRPLQDPEVQKHAAQILRNMLRQEEAEY
QRFQELLQRQPGAGAALEEQLEGARRRLSQLQLKVLQEARAAAAPDLGSRPLEGSPQLPG
RLPRDPQDGNPGLEERGPALPEVSRNSGFSEPGSPRSSPVLGSRLSTDPGSGRPQIIGPE
EDCEPGNGSNESDSVFQDLGILKSRPAHLGVFLRFLFSQADPTPLLFHLCSEVCCQQSPR
DGRALARDIWGVFLDRAAPLRVKLPEQLLAEIELRLRNGDELRPALLEAQELVIPEIQEQ
LQDYRTKRTLGLGSLYGENELQELELGNGPRESPERRERERLLAERQLGHLGDILSKYEE
ERSSPMAFALSTFMAHAGIRPRELRECRESRECRNPGAPEKLPDKDKWLPFFPKAKKSSS
SRKEKEQRQNPILKYIGKPRSSSQSTFHVPLSPAEAVRPGNVRTMIQHFENSHGEPPEPG
GAEQRLSTGSVPEELLDPGSSSRCEVRLGRSESLKGREELRRSRRSELVPRSRSDVDMDA
GSDTPRLHSASSSASSLSNRSLENPTPPYTPKMGRRSMDSPSLGFGADAFLPHLLEDEQG
PGPDLEPDPEAQSAQNCQGWQQQQPSSPGSGPGWQQQQQQQQQQQSPSGAQSWQHSVSRE
LLGSLSQREVDRQEVINELFVTELSHLRILRVLDLLFFQRLRREQLLSREELGLLFPNLP
DLIDVHSSLWESMRRLREEQGPIIGDIGDLMLARFEGAAKEEFQRVAAAFCSSQSIALEL
IRTKQRKESRFQLFMQEAESNPQCRRLQLKDLLIAEMQRLTKYPLLLENVIKCTPGGSAE
QQKLLRAREQSRDVLRAVNEAVRRAENRQRLQEHQRRLDTSALERTSNPLAAEFRNLDLT
SHRMIHEGPLAWRVGKDKSVELHVLLLEELLVLLQRQDERWLLKCHSRGGLGGAADTKQS
FSPVLKLSSLLVRSVATDKRALFIICTSELGPQIYELVALTSSEKNTWMQLLEQAVQGAT
RSLPGPPKQGQSEGSGNGAASLLLPDPAMSPELARDTEPEDCSSGGSDPEPSGRARPLQE
LLEEPRGARDGAGDGDGDGDRDGAGDGDRDGDRDGDSDPDLGDPDPDPDPDPGDPGPARG
DPDPIPGGPNPAPGAPKCPGSAGVLEAALEDVEALRLLIVRRLRPGRDPDPEDGQTPMAG
AASGQDSDPRGSGREFPVSSQEFPTSGQEFPISSQEFPVSSQEFPTSSQEFPVSSQEFPM
SGQDSTSSGRDSGMSSWEFPGSGREFPVSSQDSGMSSQEFPVSSQDSATSGWEFPGSGQE
GPEGPEPNGIRINRKAQEEGPEEATPLRGCSQSEPELREGGGASAEGNFFYLSLPTGSPR
PGGDTGDSNGDTRDTPGDIGDSSGDTPGDTRDTQGDTQGDTELILGTLEKLRGKLLSLRA
MEAAHQQLLRSLRGGHASVPNVPSTVPSVPSIAPGRAPTAPQPPALAAGPAGTRGTRGTR
GTRWHCHPRRRLQRPRPPLTRRGGTGWNFPPLPQTPGRFSREFRPGIPPGRPDRRTNALC
WEFPLFPPKIPYKYVRTAPPPL
NT seq
5109 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgcggcctccgcaggccccggacaggttgagcagcctctcctcggccctgggc
gattcccccgcggagcgaagggcgcccgggccccagcggcagccgccggacgcctccgcg
agcacagggctggtgcagcgctgtgtcatcatccagcgggaccagcatggcttcggcttc
accgtcagcggcgaccgcgtggtgctcgtgcagtccgtgcggcccggtggggctgccatg
agggccggcgtgcaggagggcgaccgcatcctcaaggtaaacgggacaatggtgaccaac
agctcccacctggaggtggtgaagttgatcaagtccggtgcctacgtggccctgaccctg
ctggggtccccgccgggccccgtgggggtcccgggcccccagcaggagccggagcccccg
ggctgtgccccgggcgccccccagcgcatcacggagccccggccgctgcaggaccccgag
gtgcagaagcacgcggcgcagatcctgcgcaacatgctgcgccaggaggaggccgagtac
cagcgtttccaggagctgctgcagcggcagccgggcgcgggcgcggcgctggaggagcag
ctggagggggcgcggcgccggctgagccaactgcagctcaaggtgctgcaggaggcgcgg
gcagcggcggccccggatttgggctcccggcccctggaggggtccccgcagctcccgggg
cgcctccccagggacccccaggatgggaacccggggctggaggagaggggcccggccctg
ccagaggtttcccggaattccggcttctccgagcccggcagcccccggagctcccccgtg
ctcggctcccgcctctccacggatccgggatcagggaggccccagatcatcggccccgag
gaggattgtgagcctgggaatggcagcaacgagagcgattccgtgttccaggatttggga
attctcaaatcccgcccggcccatctgggagttttcctgaggttcctcttctcccaggca
gatcccactcctctgctcttccacctgtgctccgaggtttgctgccagcagagcccccgc
gacggccgcgccctggccagggacatctggggcgtcttcctggacagggcggcgcccctg
cgggtgaagctgccggagcagctcctggctgagatcgagctgcgcctgcggaacggggac
gagctgcggccggcgctgctggaggcgcaggaattggtgatcccggaaatccaggagcag
ctccaggactacaggacgaagcgcacgctggggctgggcagcctctacggggagaacgag
ctgcaggagctggagctggggaacggcccccgggagagcccggaacggcgcgagagggag
cggctgctggcagagaggcagctggggcacctcggggacatcctctccaagtacgaggag
gagcggagctcccccatggccttcgccctcagcaccttcatggcccacgccgggatccgg
ccccgggaattgcgggagtgccgggaatcccgggaatgccgcaatcccggcgcccccgag
aagctcccggacaaggacaagtggctgcccttcttccccaaggccaaaaagagcagcagc
tccaggaaggagaaggagcagaggcagaacccgatcctgaaatacatcgggaaaccccgg
agctcctcccagagcacatttcatgtccccctgtcccctgctgaagcagtgaggccgggg
aacgtgcggacgatgatccagcacttcgagaacagccacggggagcccccggagccgggc
ggggccgagcagcgcctgagcaccggcagcgtccccgaggagctgctggaccccggcagc
agctcccggtgcgaggtgcgcctgggccgctcggagtcgctcaagggccgggaggagctg
cggcgctcgcggcgctcggagctggtgccgcgctcccgcagcgacgtggacatggacgcg
ggcagcgacaccccccggctgcactcggcctcctcctccgcctccagcctctccaacaga
tccctggaaaaccccacccccccctacacgccaaagatggggcgcaggagcatggattct
cccagcctgggcttcggggccgacgctttcctcccgcacctcctggaggacgagcagggc
ccgggcccggacctggagccggatcccgaagcgcagagcgcgcagaattgccagggctgg
cagcagcagcagccgagctcccccggcagcggcccgggctggcagcagcagcagcagcag
cagcagcagcagcagagccccagcggcgcccagagctggcagcactcggtgagccgcgag
ctgctgggcagcctcagccagcgcgaggtggatcggcaggaggtcatcaacgagctgttt
gtcaccgagctgtcccacctgcgcatcctgcgtgttctggatttgcttttcttccaacgc
ctgcgccgggagcagctcctgagccgggaggagctggggctgctcttccccaacctgccc
gacctcatcgacgtgcacagctccctgtgggaatccatgcggcggctccgggaggagcag
ggtcccatcatcggcgacatcggggacctgatgctggcccggttcgagggcgctgccaag
gaggaattccagcgcgtggccgccgccttctgctcctcgcagtcgatcgcgctggagctg
atccgcaccaagcagcgcaaggagagcaggttccagctcttcatgcaggaggccgagagc
aacccgcagtgccggcggctgcagctgaaggatctgctgatcgccgagatgcagcgcctg
accaagtacccgctgctgctggagaacgtcatcaagtgcaccccggggggctcggcagag
cagcagaagctgctccgtgcccgggagcagagccgggacgtgctgcgggcggtgaacgag
gccgtgcgccgcgccgagaaccggcagcgcctgcaggagcaccagcggcgcttggacacc
tcggccctggagaggaccagcaaccccctggccgcggagttccggaacctggacctgacc
tcgcaccggatgatccacgagggacccctggcctggagagtgggcaaggacaagagcgtg
gagctgcacgtgctgctgctggaggagctgctggtgctgctgcagcgccaggacgagcgc
tggctgctcaagtgccacagccggggcggcctgggcggcgccgccgacaccaagcagagc
ttcagccccgtgctcaagctgagctcgctgctcgtgcgctccgtggccacagacaagcgc
gccctgttcatcatctgcacctcagagctgggaccccaaatctacgagctggtggcactg
acgtcctcggagaagaacacgtggatgcagctgctggagcaggcagtgcaaggggccacc
aggagcctcccggggccaccgaaacagggacagagcgagggcagcgggaacggagccgcc
agcctgctgctgccggaccctgccatgtccccggagctggcgcgagacaccgagcccgag
gattgctcctcaggtggcagtgaccccgagccctcgggccgggcccggccgctgcaggag
ctgctggaggagccgcgaggggcccgggatggggccggggatggggacggggacggggac
agggacggggctggggacggggacagggacggggacagggacggggacagtgaccccgac
ctgggggaccccgaccctgaccctgaccccgaccccggggaccccggccccgcccggggg
gaccccgaccccatcccggggggtcccaaccccgccccgggagcccccaaatgccccggg
agcgctggagtgctggaggcagcgctggaggacgtggaggccctgcggctcctgattgtc
cggaggctccggccgggccgggatcccgaccccgaggatggacagacccccatggccgga
gcggcctcgggacaggacagtgacccccggggctccggccgggaattcccagtgtccagc
caggaattcccaacgtccggccaggaattcccaatatccagccaggaattcccagtgtcc
agccaggaattcccaacgtccagccaggaattcccagtatccagccaggaattcccaatg
tccggccaggactcgacctcgtccggccgggattccgggatgtccagctgggaattccca
gggtccggccgggaattcccagtgtccagccaggattctgggatgtccagtcaggagttc
ccggtgtccagccaggactcggccacgtccggctgggaattcccggggtccggccaggaa
gggccggaggggccggagcccaacgggatccgaatcaaccggaaagcccaggaggagggg
ccggaggaggccacgcccctgcgcggctgcagccaatcagagcccgagctgcgggaagga
ggcggagccagcgccgaggggaatttcttctacctgagcctccccacgggatccccccgg
ccaggaggggacactggggacagcaatggggacaccagggacacccctggggacatcggg
gacagctctggggacacccctggggacaccagggacacgcaaggggacacgcaaggggac
acggagctgatcctggggaccctggagaagctgagggggaaactgctgagcctcagggcc
atggaagccgctcaccagcagctgctgcgctccctgcggggtggccatgccagtgtcccc
aacgtccccagcaccgtccccagtgtccccagcatcgcccccgggcgggcccccactgcc
ccccagcccccagcgctcgccgcaggccccgcggggacacgggggacacgggggacacgg
gggacacggtggcactgccacccccggcgcaggctccaacgcccccgcccacctttaacc
cggaggggggggacgggctggaatttccctcccctcccccagacccccggaagattttcc
agggaattccggccgggaattccccccggacggccggacagacggacaaatgcactttgt
tgggaattccccctttttccccccaaaatcccctataaatatgtacgtactgcccccccc
ccgctgtaa
DBGET
integrated database retrieval system
