Agelaius tricolor (tricolored blackbird): 139585036
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Entry
139585036 CDS
T10815
Symbol
RBM8A
Name
(RefSeq) RNA-binding protein 8A
KO
K12876
RNA-binding protein 8A
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03013
Nucleocytoplasmic transport
atrc03015
mRNA surveillance pathway
atrc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139585036 (RBM8A)
09122 Translation
03013 Nucleocytoplasmic transport
139585036 (RBM8A)
03015 mRNA surveillance pathway
139585036 (RBM8A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atrc03019
]
139585036 (RBM8A)
03041 Spliceosome [BR:
atrc03041
]
139585036 (RBM8A)
Messenger RNA biogenesis [BR:
atrc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
139585036 (RBM8A)
Spliceosome [BR:
atrc03041
]
Complex C
Other components
EJC/TREX
139585036 (RBM8A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
139585036
NCBI-ProteinID:
XP_071273538
LinkDB
All DBs
Position
Unknown
AA seq
200 aa
AA seq
DB search
MAAPCTSALFPPTSGALPACTATRGKMADVLDLHEAGGEDFAMDEDGDESIHKLKEKAKK
RKGRGFGSEEGSRARVREDYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDVHDRFA
EFGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQELMGQPVSVDWCFVRGP
PKGKRRGGRRRSRSPDRRRR
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggccgccccctgtacttccgctctgttccctcccacttccggcgcgctcccggcgtgc
accgctactcgcggcaagatggcggacgtactggatcttcatgaggcgggcggagaggat
ttcgctatggacgaggacggggacgagagcatccacaagctgaaagaaaaggccaagaag
cggaagggccgcggcttcggctcagaggaaggatcccgcgctcgggtgcgcgaagattac
gacagcgtggagcaggacggggacgagccagggccacagagatccgtggagggctggatc
ctctttgtgacaggggtgcacgaggaggccaccgaggaggacgtgcacgacagatttgct
gaatttggggagatcaaaaacatccacctgaacctggaccggcgcactgggtacctcaag
ggttacacgctggtggagtacgagacgtacaaggaggcgcaggcggccatggaggggctc
aacgggcaggagctgatggggcagccggtcagcgtggactggtgctttgtgaggggccct
cccaagggcaagaggaggggcgggcgccggcggagccgcagtccggaccggcgccgccga
tga
DBGET
integrated database retrieval system
