KEGG   Agelaius tricolor (tricolored blackbird): 139585293
Entry
139585293         CDS       T10815                                 
Symbol
SCAF4
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
  KO
K13167  SR-related and CTD-associated factor 4
Organism
atrc  Agelaius tricolor (tricolored blackbird)
Brite
Transcription machinery [BR:atrc03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     139585293 (SCAF4)
Spliceosome [BR:atrc03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   SR proteins
    139585293 (SCAF4)
SSDB
Other DBs
NCBI-GeneID: 139585293
NCBI-ProteinID: XP_071274027
LinkDB
Position
Unknown
AA seq 1086 aa
MEAVNAFNQELFSLMEMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN
GVFKIEIIQPLLDMAAGTSATAPMAENATNNEGSPPPPAKVPSEPPQVTANSVPAVPQLP
SSDAFAAVAQLFQTTQGQQLQQILQTFQQPQKPQSPVIDNTVMAQVQAITAQLKTTAAQP
PEQKAAFTAPEQKTSFDKKLLDRFDYDDEPEAVEDSKKEDSAPSPAVSQPALTSLSFSAQ
AGWCSMPGGFPGEGMQQPVFPQLPNMDPFQQRMMGMQQDPMRHQVPLPPNGQMPGFGLLP
TPQFPPMAQPVMPPAAPVQPTFQSPFPVQAEPHLQKPHQQDMEVEQPPIQEGKRHVSDSR
KSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRRSPKSRSQERREREREKERRS
KGLPQIKAETVSVCSTTLWVGQLDKRTTQQDVGSLLEEFGPIESINMIPPRGCAYIVMVH
RQDANRALQKLSRGNFKVNQKSIKIAWALNKGIKPDYKQYWDVELGVTYIPWDKVKPEDL
ESFCEGGMLDNETLSPEWKGIPKKSENEVAQNGGAEAAHNEPVSPIPKALPVPIPVPMPA
PITVPPPQVPPHPSGPPVVGALQPPAFTAPLGIPPPGFAPGVPPPPPPPFLRPGFNPLHL
PPGFLPPGPPPPITPPVSVPHTPAVNIPNSTATGGNEDTTKESSVGNPIPTVVSGGRGNA
ESTDTSKIYGTVPPPVAPTNVPAPVTQAVPLLGTQGVAPPPPAPVVGLQTPSTGLLGARP
GLIPLQRPPGMPPPPPLPRFPMLPPRHMPPHMMHRGPPPGPGGFGMPPPHGMKAPFPPPG
HFVRPAGGQGGSEENRDGRQFRNDRQFTGSREQERFGRRSFGNRADSERERYGGRDEREH
ERPGGRDRRDWGRRSPERDRHRDSEDRNRRSSGHRDRERDSRDRESRRDKEESRGKEKPE
VTDRAEGDKNHESHGGKTEGADLVSELAAGDAEPAGANAAPESAPEATSSLEQADKDTGS
AAEAPR
NT seq 3261 nt   +upstreamnt  +downstreamnt
atggaggccgtgaacgccttcaaccaagagctcttctcactgatggagatgaaacctcct
atttcccgagcaaagatgattctcatcacaaaagctgccattaaagctattaagctctac
aagcatgttgtccagattgtggagaagtttatcaaaaagtgcaagccagagtacaaagtg
ccgggcctgtacgtcatcgactccatcgtgcggcagtcccggcaccagttcggaaccgac
aaggatgtctttgggcccagattctccaagaatattactgccacattccagtatttgtat
ctgtgtccatctgaagacaagagtaaaatagttcgtgttctgaacctctggcagaaaaat
ggagtatttaaaattgaaataattcagcctctcttggatatggcagcaggaaccagtgcc
actgcacccatggcagagaatgctactaacaatgaaggctcgccgccccctccggccaag
gttccctcggagccgccgcaagtgaccgcgaactcggtgcccgccgtgccacagctgccc
agctccgatgcctttgcagctgtagcccagctgttccagacaacacaaggacagcagctc
cagcaaatcctgcagaccttccaacagcctcagaagccccagtcaccggtcatagacaac
actgtgatggctcaggttcaagctattactgctcagctgaaaaccacagcagcacagccc
ccagagcagaaagctgctttcacagcacctgagcagaaaacatcatttgacaaaaagctg
ctagatcggtttgactatgatgatgaaccagaagctgtggaagattcaaagaaagaggat
tcagctccttcccctgcagtgtctcagccagctttgacctctctctcattcagtgcacag
gctggatggtgctcaatgccgggtgggtttccaggagaaggcatgcaacagccagtattt
cctcagctcccaaatatggatccttttcagcagcggatgatgggaatgcagcaggatccg
atgcggcaccaggtgcccctccctccaaatgggcaaatgccaggttttggtctcctgcct
accccccagttcccacccatggctcagccagtgatgcctccagcagcgccagtgcagcca
actttccagtctcccttcccagtccaggctgagccacacctgcagaaaccccaccagcag
gatatggaagtggaacagcctcccattcaggagggaaagcggcatgtttctgacagtagg
aaatcaagatctagatctgcatcaaggtcccccaagaggagacgctcgcggtcgggctcg
cgctcgcggcgctcgcggcaccggcgctcccgctcgcgctcccgcgaccggcgccggcgc
tcgcccaagtcccgctcccaggagcggcgcgagcgcgagcgggagaaggagcgccgctcc
aaggggctgccccagatcaaggcagagaccgtcagtgtttgcagtaccacactctgggta
ggacagctggacaaaaggacaactcagcaggatgtgggaagtctcttggaggagtttggc
cccattgagtccatcaatatgataccgcccagaggatgtgcctacattgtcatggtgcac
agacaagatgccaacagagccctccagaaactgagccgaggcaacttcaaagtcaaccag
aaatccatcaagattgcctgggctctgaataaaggaataaagccagactacaagcagtat
tgggatgtagaattgggtgtgacttacataccatgggacaaagtcaaacctgaagatctg
gaaagtttctgtgaaggaggaatgctggacaacgagacccttagtccagagtggaaggga
attcccaagaagtctgaaaatgaagtggctcagaatggaggcgcagaagctgcacacaat
gaaccagtgtcacctattcccaaagctttacctgtcccaattcctgttcccatgcctgca
ccaataacagtacctcctccacaggttcccccccatccatcagggcctcccgtggttggt
gcactccagcccccagctttcacagcacctttaggaattccccctcctggatttgccccc
ggggtgccgccgccgccaccgcctccgttcctccggccgggcttcaacccgctgcattta
cctccaggattccttcctcccgggccaccacctcccataactcctccggtctctgtcccg
cacactccggcagtgaacatcccaaactctacagccactggtgggaatgaggacactaca
aaggagtcatctgtaggaaatcccatcccaacagtagtttctggaggcagagggaatgct
gaaagtactgacacttccaaaatctatggcactgttccacctcctgtagcacctaccaac
gtccctgctcctgtcacccaggctgttccactccttggcacccagggcgtggcgccgccg
ccgcccgcgcccgtggtggggctgcagactccgtccacggggctgctgggcgcccggccc
gggctgatcccgctgcagcgcccgccggggatgccgccgccgccgccgctgccgcgcttc
cccatgctgccgccgcgccacatgccgccgcacatgatgcaccgggggcccccgccgggc
cccggcggcttcggcatgcctcccccgcacggaatgaaagcgcccttcccgccgcccggc
cacttcgtgcggcccgcgggcggccagggcggcagcgaggagaacagggacgggcggcag
ttcaggaacgacaggcagttcacgggcagcagagagcaggagcggttcgggaggagatcc
ttcgggaaccgggcggacagcgagcgggagcgctacggcggccgcgacgagcgggagcac
gagcggccgggcgggcgcgacaggcgagactggggacgccgcagccccgagcgcgaccgg
cacagggactcggaggacaggaacaggcgctccagcggccaccgagacagggagagggat
tccagggatcgggagtctcgtagagacaaggaggagagccgcggcaaggagaagccggag
gtgacagacagagcggagggcgacaaaaaccacgagtcccacggcggcaaaacggagggc
gcggaccttgtttcagaactggctgcgggagacgccgaacccgcgggcgccaacgccgcg
ccggagtcagcgcccgaggctacctcatccctggaacaggcggacaaggacacgggctcg
gcggccgaggcgccgcgctag

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