Agelaius tricolor (tricolored blackbird): 139586179
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Entry
139586179 CDS
T10815
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139586179 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
atrc01009
]
139586179 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atrc04131
]
139586179 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
atrc03029
]
139586179 (RB1CC1)
Protein phosphatases and associated proteins [BR:
atrc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139586179 (RB1CC1)
Membrane trafficking [BR:
atrc04131
]
Autophagy
Autophagosome formation proteins
ULK complex
139586179 (RB1CC1)
Mitochondrial biogenesis [BR:
atrc03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
139586179 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
139586179
NCBI-ProteinID:
XP_071275504
LinkDB
All DBs
Position
Unknown
AA seq
1598 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQNVADLKYAIQTKYKIAIQHQVLVVSGGECMAPDRRVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTNSYQKLLYKFENVYSSYLQ
SIDDIKLKLTHLGSAVSIMAKIPLLECLTRHSYRECLGRLESSPEHGGAESEETEDGKSP
ELVLYPDIPKVNSKSMLASFCKSVEHSALEGTDPENVKDDKESGQNATVQDNEMSVELKD
DDQPSFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIQPFLAECRQTIAKLDNQN
MKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHAN
QLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALLRLVTE
LLERVKVVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALIKDGKHLYEAEKAKRESF
GKLFRKSFLRNRLFRGLDSWPPSFCTRKPRRFDSELPDISLSDLQFLQSFCPSEVQPLLR
VPILCDFEPLHQHVRALHNLVKAAQSLDEMSQTITDLLNEQKASNSQASPQSATTPRTES
TTGTAIATSSRTPPSLSLQGPLCPPVCPPAPLEELSPDSIDAHTFDFETIAHPNLEQALK
QGSLDLDSLAESPESDFMSAVNEFVIEENPVSPNVISDPQSPEMMVESLYSSVINAIDSR
RMQDTSSCVKDVSVENASLSVCVEKCRVIAQDSKVHLRGIKEDLCHFKTLVQREQCDFSN
SLKCTSLEIVNTIEKVKLSLEKTLNDKHQNELQSLKSEYETKINKLLEDGEESKKKIKKL
KGDLLGLEEVLQNKNDEFAIVKNEKEAVVCLQNEKDQKLLELECQMETQNSEIKELRQSR
EIVLEDLKKLHVENNEKLQLLRAELESLEQSHLKELESNLQARHLQEFEKVLAEHKDCLD
KLKKENEHRLEQMQESHEVVMKEKQQQVEELQLKVSDLSDLRCKLEVELALKEAETDEMK
LLLEESRNQQQETLRSQVDKETESLRKEIDKLNNKIQVSSDEHQVGLSELRTLMTIEKDQ
CISELVNRYEEESNLLRTELNKVTLLHQKTAEAEKRLSEQITELQSKLELEMTALEKEKT
EKLSLCEKQEKYEAIIRKLKEEKELLISNQEQDRQLLIQKLNCEKEDAVQTACKELELQR
EAAEKGLLEKILQLEMQVNQSPPAESSAESNLVAELQEKLQEEKMKFLEQLEEQEKRKNE
EMQNIRTSLTAEQQTNFNTVLAREKMKKENIINDLSDKLKVLTQQQEKDKDLIETLSEDR
ARLLEEKKKLEEEVSKLRSSNFSPSTYLAVASEACGACAADVPTDTERLVADFGAEGRMD
STMETSMMAVHENVHMSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKI
AIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPGECASGASRRPWVL
GKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atgaagctatatgtatttttggtcaacactggaactacccttacatttgatactgaactt
gctgtacaaaatgtggctgatctgaaatatgcaattcaaacaaaatataagattgccatt
cagcaccaagtactggttgtcagtggaggagagtgtatggcaccagacagaagagtgtgt
agttacagtgctggaacagacaccaacccaatttttttattcaacaaagaaatgatcttg
tgtgaacgtccaccagctatccccaaaaccacattttcagcagagaatgagatggaattg
aaagtagaagaatctcttatgatgcctgcagtgtttcatacagtagcatcacgaacacag
cttgctgtggaaatgtatgaggttgccaagaagctttgctccttttgtgaaggtcttgta
catgatgaacatcttcagcatcaaggctgggctgctataatggccaacttggaagattgt
acaaactcttaccaaaagctgctttacaagtttgaaaatgtgtattcaagctatttgcag
tccatagatgatatcaaattgaaacttacacacttgggttctgctgtttctatcatggcc
aagataccactgctggagtgcctaacaagacatagttacagagagtgtttaggaagactg
gagtcttcacctgaacatggaggagcagaaagtgaagaaactgaggatgggaaatctcct
gaattggtgctttatcctgatatacctaaagtgaacagtaaatcaatgttagcatcattt
tgcaagtcagttgaacattcagctttggaaggcacagatcctgaaaatgtaaaagatgat
aaagaatctggtcaaaatgctactgtccaggacaatgaaatgtcagtagaattgaaagat
gatgatcagccttccttcaatgtgtctttgttagactggataaatgttcaagatagacct
aatgatgttgaatccctggtcagaaaatgttttgattccatgagcaggcttgatccaagg
atcatccagccctttctggcagaatgtcgccaaactatcgccaaacttgataatcagaac
atgaaggctattaaaggtcttgaggatagactctatgcattggaccagatgatagcaagc
tgcagcagactggtgaatgaacaaaaagaacttgctcagggatttttggctaatcagaag
agagctgagaacttgaaagatccttctgtgctgcctgatttgtgtttgagtcatgcaaat
cagctgatgattatgttaactaatcacagaaaactgttagatattaaacagaaatgtacc
actgccaaacaggagcttgcaaataatctgcaagtcagactgaagtggtgttgttttgta
atgcttcatgctgaccaagatggagagaaactacaagcactgcttcgtcttgtaacagag
ctcctggaaagggtcaaagttgtagaggctctcagcactgttcctcagatgtactgttta
gctgttgttgaagttgtgaggagaaaaatgttcataaaacactacagggagtgggcaggt
gctttaataaaagatggcaaacatctatatgaagctgaaaaggcaaaaagggaatctttt
ggtaaactctttaggaagtcttttctaaggaatcgtttgtttagaggacttgactcctgg
cctccatccttttgtacacgaaaacctcgcagatttgacagtgagcttccagatatctca
ttgagtgacttgcagtttttgcagtctttctgtccttcagaagtacagccattactcagg
gttcccatactttgtgactttgaacctcttcaccagcatgtacgtgctctacataacctg
gtcaaggcagcacagagtttggatgaaatgtcacaaactattacagacctgctgaatgag
caaaaggcctccaatagtcaagcatcgccacaatctgctaccacgccaaggacggaaagt
actacaggaaccgcaattgctacctcttcaagaactcctccatcactcagtcttcagggt
cccctgtgtcctcctgtgtgtcccccagctcctttggaagaattgtctccagacagcatc
gatgctcacacgttcgattttgaaactattgcccatccgaacttggagcaagctcttaag
caaggatcgttagacttggattcattggcagagagtccagaatctgactttatgtcagca
gtaaatgaatttgtaatagaagaaaatccagtgtctcctaatgtcataagtgacccacaa
agcccagaaatgatggtggaatctctttattcttcagttatcaatgcaatagacagtagg
cgtatgcaagatacaagttcttgtgtaaaggatgtttcagtagaaaatgcttctctcagt
gtttgtgtggagaagtgtagggttattgctcaagactcaaaggtacatttaagaggtata
aaagaagatctttgccatttcaaaacacttgtacaaagagaacagtgtgacttttctaat
tctttaaaatgtacttccttagaaatagtaaatacaattgaaaaggtaaagctttcactt
gaaaaaacactaaatgataaacatcaaaatgaattacagtctttgaaaagtgagtatgaa
actaaaattaataaattactggaggatggtgaagaaagtaaaaagaaaatcaaaaagtta
aaaggtgacctgttgggtcttgaggaagttcttcagaataagaatgatgaatttgcaata
gtaaagaatgagaaagaagctgtggtttgccttcagaatgaaaaagaccagaaattactt
gaattggaatgccaaatggagacacaaaattctgaaatcaaggaactgaggcagtcacgt
gaaattgtacttgaagacttgaaaaaacttcatgttgaaaacaacgagaaactacaactc
ctgagggcagaacttgagagtttagagcaaagccatttaaaagaactggaaagcaaccta
caagccaggcatttacaggaatttgagaaggtcctagctgagcacaaggactgtttggat
aagttaaaaaaagagaacgagcatagacttgaacaaatgcaggaatctcatgaggtagtt
atgaaagagaaacaacaacaagtagaagagttacaactgaaggtttcagatctgtctgat
ttgaggtgcaaactagaagttgaacttgccctgaaagaggcagaaactgatgaaatgaag
cttcttttggaagaaagcagaaaccagcaacaagagaccttaagatctcaggttgacaag
gaaactgaaagcttaagaaaggagatagataaattaaacaataaaatacaagtcagcagt
gatgaacatcaagtgggcttatcagaactaaggactctgatgacaattgagaaagatcag
tgtatttctgagctagtaaataggtatgaagaagaatcaaatttgcttagaactgaatta
aataaagtaacgcttcttcatcaaaaaactgctgaggcagaaaaaagactttcagagcaa
ataacagaactgcaaagtaagttagagttggaaatgactgccctagagaaggaaaaaaca
gaaaaattgtctctctgtgagaagcaggaaaaatatgaagctattatccgtaagctaaag
gaagagaaagaactgttaatatctaaccaagaacaagacaggcagttgctcattcagaag
ctcaattgtgaaaaagaggatgcagtacaaactgcttgtaaagagttggaattacagagg
gaagctgctgaaaaagggcttttggaaaaaatactgcaacttgagatgcaagtgaatcag
agtcctcctgctgaatcatctgctgaatcaaacttagtcgctgaacttcaggagaagctt
caggaagaaaaaatgaagttcttagagcaacttgaagaacaagagaaaagaaaaaatgaa
gaaatgcagaacatcagaacatcactcactgcagagcagcagaccaactttaacactgtt
ctggcaagagagaaaatgaaaaaagaaaacataattaatgatcttagtgacaaattaaaa
gtgcttacacaacagcaagaaaaagataaggatttgattgaaacactttctgaagataga
gctcgcttacttgaagagaagaagaaacttgaagaagaagttagtaaactgagaagtagt
aatttttctccatcaacctacttggcagtagcatcagaagcttgtggagcctgtgcagct
gacgtgcccacagacacagagagattggttgctgactttggggctgaggggagaatggat
tccacgatggaaaccagtatgatggctgtgcatgaaaatgttcatatgtctgaagaaaag
cagaggataatgttgctagaaagaactttgcagttgaaagaagaggaaaataagagatta
aatcaaagattgatgtcccaaagcatgtcatcagtatcctcaagacattctgaaaaaata
gcaattagagattttcaggttggcgatttggtactcataatcttggatgaaaggcatgac
aactacgtgttgtttactgttagtccaaccttgtatttcttgcactcagagtcccttgct
gcactggatctcaaaccaggtgagtgtgcatcgggtgcatctaggagaccgtgggtgcta
ggaaaagtgatggaaaaggagtattgccaggcaaaaaaggcacaaaacagattcaaagtt
cctttgggtacaaaattctacagagtgaaagcagtaccatggaacaagaaagtataa
DBGET
integrated database retrieval system
