Agelaius tricolor (tricolored blackbird): 139586223
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Entry
139586223 CDS
T10815
Symbol
PEX6
Name
(RefSeq) peroxisome biogenesis factor 6 isoform X1
KO
K13339
peroxin-6 [EC:3.6.4.-]
Organism
atrc
Agelaius tricolor (tricolored blackbird)
Pathway
atrc04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
139586223 (PEX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atrc04131
]
139586223 (PEX6)
Membrane trafficking [BR:
atrc04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
139586223 (PEX6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
DPBB_PEX6
PEX6_vert_N
AAA_16
AAA_lid_3
AAA_5
AAA_22
Mg_chelatase
PEX6_4th
nSTAND3
nSTAND_NTPase5
Vps4_C
AAA_25
RuvB_N
NPHP3_N
RNA_helicase
AAA_33
DUF815
TIP49
Parvo_NS1
bpMoxR
AAA_28
IstB_IS21
AAA_14
AAA_24
Motif
Other DBs
NCBI-GeneID:
139586223
NCBI-ProteinID:
XP_071275593
LinkDB
All DBs
Position
Unknown
AA seq
973 aa
AA seq
DB search
MAVAVLRPLDAPPAELWPATALLLAPAGLCAALRGRGGALVLAVRPAGRGGAQPVLLSAV
ALEAGGRRGAELWLRGALLRRLGLAAGRRVAVWPVRRPPALAWVLLGAAGRAGRLAGGAV
LARRGEALPGPGPGPGPLVLEARPALQGLLGSGTRTALAPPPPAPPGTARGRPPSAAAPP
LVSRFAAAAAGPRLRAVPGGASGSGGAEVWVSRRGLLALGLFQGEWVRVGAEGAAREHLA
ALLARPPPWEYPRAARRGPADGTALLAPALAFNLGCDPAAAAQLRLQRYERSGAADGKGS
RSVLSVPPFAKELHLEIVCSPAYSTRGSYDGVLYRHFETPRLVQEGDILCVPTFGNAEFI
ELNADKFLRWPELYFKVKKIVGMVEGEQSEGYLVDTQNTSLYLVGSTNSTVPSAPAHNNS
NEFWSSLSPAGLSDVVKQLCDALRPHLRRRASALSGVGSVLLSGPSGSGKLMAVRAACSC
LNLHLFKVDCVSLCSDTSAATEEKVQVAFSQAQQYQPCVLLLKDIEVLGRERDGLGEDAR
VIATLRQLLLDTDPALSHPVLVIGTTCKLQNVPTDVQTAFLHEVKIEAPSEEQRRLMLSM
LTASLPLGKEVSLSKLARRTAGFVLGDFCALLSHSSRAACTRIQALSFPGGLSEEVERDF
CTAGFPVLEEDFSAALEQLHDAHSQAVGAPKIPSVSWQDVGGLQEVKKEILDTIQLPLEH
PELLSLGLCRSGLLLYGPPGTGKTLLAKAVATTCTMTFLSVKGPELINMYVGQSEENVRN
VFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSSREVFVIGA
TNRPDLLDPALLRPGRFDKLVYVGISEDRESQLQVLSAVTRRFKLDPSVNLTTILEKCPA
QLTGADIYALCSDAMMCAVKRKVEWIEEGLDTEKSALILTMEDFLQAAARLQPSVSEQEL
LRYRLIQQKFAAS
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgtgctgcggccgctggacgcgccgccggccgagctgtggccggccacg
gcgctgctgctggcgccggcggggctgtgcgcggcgctgcgcggccggggcggcgcgctg
gtgctggcggtgcggccggcggggcgcggcggggcgcagccggtgctgctgagcgccgtg
gcgctggaggcgggcgggcggcgcggtgcggagctgtggctgcgcggggcgctgctgcgg
cgcctggggctggcggccggccgcagggtggccgtgtggcccgtgcggcgcccgccggcg
ctggcctgggtgctgctgggggcggcggggcgggcggggaggctggcgggcggcgcggtg
ctggcgcggcggggcgaggcgctgccggggccgggccccgggccgggcccgctggtgctg
gaggcgcgcccggcgctgcaggggttgctgggcagcgggacgcgcaccgccctcgccccc
ccgccgcccgccccgccgggcaccgcccgcggccgccccccgtccgccgccgcgccgccc
ctcgtctcccgcttcgccgccgccgccgccgggccgcggctgcgggcggtgcccggcggg
gcgagcggcagcggcggggcggaggtgtgggtgagccggcgcgggctgctggcgctgggg
ctgttccagggcgagtgggtgcgggtgggcgccgagggggcggcccgggagcacctggcg
gcgctgctggcgcggccgccgccctgggagtacccgcgggccgcccgccgcggcccggcc
gacggcaccgcgctgctggccccggccctggccttcaacctgggctgcgaccccgccgcc
gccgcacagctccggctgcagaggtacgaaaggagcggcgccgcggatgggaagggcagc
cggtccgtgctgtctgtgccgccgttcgccaaggagctgcacctggagatcgtgtgctcg
ccggcgtacagcacccggggaagctacgacggcgtgctctacaggcacttcgaaacgccg
cggctggtccaagagggagacatcctgtgtgttccaacatttggaaatgctgaatttata
gaactaaatgcagacaagttcctaaggtggccagagctttatttcaaggtgaagaagatc
gtaggcatggtggaaggcgagcagtctgagggttacctggtggacacccagaacacgtct
ctctatctggtgggttcaacaaacagcactgtcccatctgccccagcccataacaacagc
aatgagttctggagcagtttgtctcctgcgggcctttctgacgtggtgaagcagctctgc
gacgctctccggcctcacctgcgccgtcgggccagcgcgctgagtggcgtgggcagcgtt
ctcctctcggggcccagcggcagcgggaagctgatggctgtcagagctgcgtgcagctgc
ctcaacctccacctcttcaaggtcgattgtgtcagtttgtgcagtgacaccagtgcagcc
acagaggagaaagtgcaggtggccttcagccaggcccagcagtaccagccctgtgtgctc
ctgctgaaagacatcgaggtgcttggcagagagcgggacgggctcggagaggacgccagg
gtcattgctaccctcaggcagctgctcctggacacagacccagcactgagccaccccgtg
ctggtgattggcacaacctgcaagctccagaatgttcccacagatgtgcagactgctttc
cttcatgaggtgaagattgaagccccttcagaggagcagagaaggttgatgctgagcatg
ctgactgccagcctgcctctgggcaaagaagtgagcctgtccaagctggcccgcaggact
gcaggatttgtgctgggagatttctgtgccttgttgtcccacagcagccgggctgcttgc
acccgcatccaggccttgagttttccaggtgggctgagcgaagaagtggagagggatttt
tgcactgcagggttcccggtgctcgaggaggattttagtgctgcactggagcagctgcat
gatgcccactcacaggcagtgggagccccaaagatcccctcagtgtcctggcaggatgtt
ggagggctgcaggaggtgaagaaggagatcctggacactatccagctgcccttggagcac
ccagagctgctctcactgggcctgtgccgctctgggctgctgctgtacgggcctccaggg
acagggaagaccttgctggcaaaagctgtggcaacaacatgcaccatgacattccttagt
gtgaaaggaccagagctcatcaacatgtacgttgggcaaagcgaggaaaacgtgcgcaat
gtgtttgccagagccagggcagctgctccctgcattatcttctttgatgagctggattcc
ctggcccccagtcgtgggcgaagtggagattcaggaggtgtcatggacagagttgtctca
cagctccttgcagagcttgatggccttcattctagcagagaggtgtttgtcattggagcc
accaacaggcctgacctcctggacccagctctgctacggcctggcaggtttgacaagctg
gtctacgtgggcatcagcgaggaccgggagtcgcagctgcaggtgctgagtgctgtcacc
aggaggtttaaactggatccttctgtgaatctcaccaccatcctagaaaaatgcccagct
cagctgacaggagcagacatctatgccctatgttcagatgccatgatgtgtgctgtcaaa
cgcaaggtggagtggattgaggaagggctggatactgagaagtctgctctgatcctgacc
atggaagactttctgcaggctgctgctaggttgcagccatcagtctctgagcaggagctg
ctcaggtacagactcatccagcagaagtttgcagcctcctaa
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integrated database retrieval system
