KEGG   Agelaius tricolor (tricolored blackbird): 139586225
Entry
139586225         CDS       T10815                                 
Symbol
KDM5C
Name
(RefSeq) lysine-specific demethylase 5C
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
atrc  Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:atrc00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:atrc01009]
    139586225 (KDM5C)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:atrc03036]
    139586225 (KDM5C)
Enzymes [BR:atrc01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     139586225 (KDM5C)
Protein phosphatases and associated proteins [BR:atrc01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     139586225 (KDM5C)
Chromosome and associated proteins [BR:atrc03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    139586225 (KDM5C)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID zf-C5HC2 JmjN PHD MmeI_C
Other DBs
NCBI-GeneID: 139586225
NCBI-ProteinID: XP_071275556
LinkDB
Position
Unknown
AA seq 1634 aa
MEEGEQQRAGGGWPEWGPGPGGSPPWAPPPPPPPDGDEEPKRGRGAEWGGPEPSGDAGPP
RPAAAPPKAAGDEKAANAPRSRGAPPGRGAEPPQSPEERGARGGERPGAEDKARRPLGGP
RGGGAGPEPRGEWGSPWLAAEPEPPEDFLPPPECPVFEPSWAEFSDPLGYIAKIRPIAEK
SGICKIRPPADWQPPFAVEVDNFRFTPRIQRLNELEAQTRVKLNYLDQIAKFWEIQGSSL
KIPNVERRILDLYSLSKVVMEEGGYEAICKDRRWARVAQRLSYPSGKNIGSLLRAHYERI
IYPYEMYQSGANLVQCHARPFESEEKDREYKPHSIPLRQSVQPSKFNSYGRRAKRLQQEP
EPTEEDIEKNPELKKLQIYGAGPKMLGLGLVAKDKTMRKKDKDGPECPPTVVVKEEPPGE
PRGSPISPGGAREELRHSPEPCTKMTMRLRRSHSSSQFVDSYVCRICSRGDEDDKLLLCD
GCDDNYHIFCLLPPLPEIPKGIWRCPKCVMAECKRPPEAFGFEQATREYTLQSFGEMADA
FKADYFNMPVHMVPTELVEKEFWRLVNSIEEDVTVEYGADIHSKEFGSGFPVRDGKRRLS
PEEEEYAGSGWNLNVMPVLQQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSI
NYLHWGEPKTWYGVPSFAAEHLEEVMKKLTPELFESQPDLLHQLVTLMNPNTLMAHGVPV
VRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFS
HEELICKMAASPEKLDLNLAAAVHKEMFVLVQEERKLRKALLEKGITEAEREAFELLPDD
ERQCDKCKTTCFLSALACYDCPQGLVCLYHMDDLCKCPRSKQYLRYRYTLDELPAMLHKL
KVRAESFDTWANKVRVALEVEDGRKRTLEELRALESEARERKFPENELLHRLKGCLGQAE
RCVSEALGLISSQETGVPAPALTLEELRAFLEQMNQLPCVMHQIGDVQALLDRVEAFQAE
ARAALAVAAPGAGALQELLERGARLGVEVPEGRRLERQLAQAAWLEEVTATLRSPRARVP
LPVMRGLIQAGRTVAPSPAVDVAMAELQELLTIAQRWEEKAQMCLEARQKHPPATLAAII
KEAENIPALLPNIQALKEALGKARAWIADVEEIQNGDHYPCLDDLEGLVAVGRDLPVRLE
ELRQLEVQVGTAHSWRDKASRTFLKKNSCYTLLEVLCPCADAGSDSSKRLKWRQEPGLYR
LDAESLGLSAQDLRDPGAVIVAFKEGEQKEKEGMLRLRHANAQKSAPPLPGPGPPSCVCG
QPSGPAMLQCQLCRDWFHGSCVAWPRLGSQKPSPAWWEWDSKFLCPLCQRSRRPRLETIL
ALLVALQKLPVRLPEGEALQCLTERAITWQDRARQLLASPEVAGPLERLAALRQRLCHGD
GDGALREASRNEQTKRLRHGDGDGALREASRNEQTKVSVENGDAPSPEKNGALPSELEAL
CAALPRLQGPVLELPEAARRPLEELMMEGDLLEVTLDEAQSIWRLLQATRPPPLGLFRLL
LELEQAERRGPRARGRDPERRRKRRAERGGGGHLLPSLAKEELEPKRSRGTEGGGDPRDP
RDSPTAGAQTPGDS
NT seq 4905 nt   +upstreamnt  +downstreamnt
atggaggagggggagcagcagcgcgcagggggcggctggcccgagtgggggcccggcccg
ggggggtccccgccgtgggcacccccgccgccgccgccgcccgacggggacgaggagccc
aagcggggccgcggcgcggagtgggggggcccggagccctcgggggacgcggggcccccc
cggccggcggccgcgccccccaaagcggcgggggacgagaaggccgcgaacgccccgcgg
agccggggggcgccccccgggcgaggagcggagcccccgcaaagccccgaggagcgcggg
gcccgcggcggggagcggcccggagccgaggacaaggcccggcggcccctcgggggtccc
cgcggcggcggggccggcccggagccgcgcggggagtgggggtcgccgtggttggcggca
gaaccggagccccccgaggactttttgcctcccccggagtgtcccgtgttcgagcccagc
tgggccgagttcagcgaccccctgggttacatcgccaagatccgcccgatcgccgagaaa
agcggaatctgcaaaatccgacccccggccgactggcagcccccgtttgctgtcgaggtc
gacaacttcaggttcaccccccgcatccagaggctcaacgagctggaggctcagacacgg
gtgaagctgaactacctggaccagatcgccaaattttgggagatccagggctcctccctc
aaaattcccaacgtggagcggcgaatcctcgacctctacagcctcagcaaggtggtgatg
gaggagggtggctacgaggccatctgcaaggatcgccggtgggcgcgggttgcccagcgc
ctctcgtacccctcgggcaagaacatcggctccttgctgcgggcgcactacgagcgcatc
atctacccctacgagatgtaccagtctggggccaacctggtgcagtgccacgcgcggcca
ttcgagagcgaggagaaggacagggagtacaaaccccacagcatccccctgcgccagtcc
gtgcagccctccaagttcaacagctacggccggcgtgccaagcgcctgcagcaggagccc
gagcccaccgaggaggacatcgagaagaaccccgagctgaagaagctgcagatttatggg
gccgggcccaaaatgttggggttggggctggtggccaaggataagaccatgaggaagaaa
gacaaggacggccccgagtgtccccccacggtggtggtgaaggaggagcctccgggggag
ccccgggggtccccaatatccccagggggggctcgggaggagctgcgccacagccccgag
ccctgcaccaagatgacgatgaggctgcgccgcagccacagcagcagccagttcgtggat
tcctacgtgtgccgcatctgctcgcgcggtgacgaggacgacaagctgctgctgtgtgac
ggctgcgatgacaactaccacatcttctgcctgctgccacccctgcccgagatccccaag
ggcatctggcgctgccccaaatgcgtcatggcggagtgcaagcggcccccggaggcgttt
ggtttcgagcaggccacgcgggagtacacgctgcagagctttggggagatggccgacgcc
ttcaaggccgactacttcaacatgcccgtccatatggtgcccacggagctggtggagaag
gagttctggcgcctggtgaacagcatcgaggaggacgtgaccgtggagtacggcgccgac
atccactccaaggagttcggctccggcttccccgtgcgcgacggcaaacggcgcctgtcc
cccgaggaggaggagtacgctggcagcggctggaacctgaacgtgatgccggtgctgcag
cagtcggtgctgtgccacatcaacgccgacatctcgggcatgaaggtgccctggctctac
gtgggcatggtgttctcagccttctgctggcacatcgaggaccactggagctactccatc
aactacctccactggggcgagcccaagacctggtacggggtcccgtcgttcgcggccgag
cacctggaggaggtgatgaagaagctgacgccggagctgttcgagagccagcccgacctc
ctgcaccagctcgtcaccctcatgaaccccaacaccctcatggcccacggcgtccccgtg
gtccggaccaaccaatgcgcaggcgagttcgtcatcaccttcccccgcgcctaccacagc
ggcttcaaccagggctacaactttgctgaggccgtcaacttctgcacggctgactggctc
cccgcaggccggcagtgcatcgagcactatcgccgcctgcgccgctactgcgtgttctcg
cacgaggagctgatctgcaagatggcggccagccccgagaagctggacctgaacctggcg
gccgccgtgcacaaggagatgttcgtgctcgtgcaggaggagcgcaagctgcgcaaggcc
ctgctcgagaagggcatcacggaggccgagcgcgaggcctttgagctgctgcccgacgat
gagaggcagtgtgacaagtgcaagaccacgtgtttcctgtctgccctggcctgctacgac
tgcccccagggcctcgtctgcctctaccacatggacgacctctgcaagtgcccccgcagc
aagcagtacctcaggtaccgctacaccctggacgagctgccggccatgctgcacaagctc
aaggtgcgcgccgagtccttcgacacctgggccaacaaagtgcgcgtggccctcgaggtg
gaggacggccgcaagcgcacgctggaggagctgcgggcgctggagtcggaggcgcgggag
cgcaagttccccgagaacgagctcctgcaccgcctcaagggctgcctgggccaggccgag
cgctgcgtctccgaggccctggggctcatcagctcccaggagaccggggtccccgcgccg
gcgctgacgctggaggagctgcgggcgttcctggagcagatgaaccaactgccctgcgtg
atgcaccagatcggggacgtgcaggccctgctggaccgagtcgaagccttccaggccgag
gcccgggccgcgctggccgttgccgctccgggcgcgggggccctgcaggagctgctggag
cgtggggcccgcctgggcgtggaggtgcccgagggccggcggctggagcggcagctggcc
caggccgcgtggctggaggaggtgacggccacgctgcgctccccccgcgcccgcgtcccc
ctgcccgtcatgcgcggcctcatccaggccggccgcaccgtggcccccagccccgccgtg
gacgtggccatggccgagctgcaggagctgctgaccatcgcccagcgctgggaggagaag
gcccagatgtgcctcgaggccaggcagaagcaccccccggccacgctggctgccatcatc
aaggaggccgagaacattccagcgctgctgcccaacatccaggccctgaaggaggccctg
ggcaaggcccgagcctggatcgccgacgtcgaggagatccagaacggtgaccattacccc
tgcctggatgacctggagggtctggtggccgtgggccgggacctgcccgtgcgcctggag
gagctgcggcagctcgaggtgcaggtgggcaccgcgcactcctggcgggacaaggcctcc
cgcaccttcctcaagaagaactcctgctacaccctgctcgaggtgctgtgtccctgcgcc
gacgccggctccgacagcagcaagaggctcaagtggcggcaggagccggggctctaccgc
ctggacgccgagagcttggggctgtcagcgcaggacctgcgggaccccggggccgtgatc
gtggcgttcaaggagggcgagcagaaggagaaggagggaatgctgcgcctccgccacgcc
aacgcccagaaatcggcgccgcccctgccgggcccgggccctccctcctgcgtgtgcggg
cagccctcggggccggccatgctgcagtgccagctctgccgggactggttccacggctcc
tgcgtggcctggccccgcctgggctcccagaaaccatccccggcctggtgggagtgggac
tccaagttcctgtgcccgctgtgccagcgctcgcggcggccgcgcctcgagaccatcctg
gcgctgctggtggccctgcagaagctgccggtgcggctgcccgagggcgaggccctgcag
tgcctcaccgagagagccatcacctggcaggaccgcgcccgccagctcctggcctccccc
gaggtggccgggcccctggagcgcctggcggccctgaggcagcggctgtgccacggtgat
ggtgacggagccctgcgcgaggccagccgcaacgagcagaccaagcggctgcgccacggc
gatggtgacggagccctgcgcgaggccagccgcaacgagcagaccaaggtgtcggtggag
aacggggacgcccccagcccggagaagaacggagccctgccctcggagctggaggcgctg
tgcgcggcgctgccgcggctgcagggcccggtgctggagctgcccgaggcggcgcggcgg
ccgctggaggagctgatgatggagggggacctgctggaggtgacgctggacgaggcccag
agcatctggcggctgctgcaggcgacgcgcccgcccccgctggggctgttccgcctgctg
ctcgagctggagcaggccgagcgccgggggcctcgggcccgcggccgggatcccgagagg
cgccggaagcgccgggcggagcggggagggggggggcacctcctgccctccctggccaag
gaggagctggagccaaagaggagccggggaaccgagggcgggggcgacccccgggacccc
cgggacagccccacggccggggcccagaccccgggggactcgtga

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